Gene annotation
Transcriptome id Sobic.003G301500.1
Synonym FMN/FHY, Sb03g035060, ATFMN/FHY
Functional annotation haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed
UniProt C5XKS5
Pfam PF13419
Panther DB PTHR18901 PTHR18901:SF37
NCBI CDD KOG2914; Predicted haloacid-halidohydrolase and related hydrolases
KEGG Orthology K17623; PUDP, pseudouridine 5'-phosphatase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G21470 : riboflavin kinase/FMN hydrolase
RAP-DB (Rice) LOC_Os01g55310.1 : haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed
MaizeGDB (Corn) Zm00025a040007
Brachypodium -
Barley -
Wheat TraesCS3D02G294900 , TraesCS3D02G294900 , TraesCS3A02G306900 , TraesCS3A02G306900
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G189200 OsFBK9 - F-box domain and kelch repeat containing protein, expressed -
2 Sobic.008G167600 VTC2, putative, expressed -
3 Sobic.002G431500 - -
4 Sobic.001G062300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldehyde oxidase, putative, expressed K11817: indole-3-acetaldehyde oxidase
5 Sobic.010G272800 OsFtsH1 FtsH protease, homologue of AtFtsH1/5, expressed K03798: ftsH, cell division protease FtsH
6 Sobic.010G223200 OsFtsH2 FtsH protease, homologue of AtFtsH2/8, expressed K03798: ftsH, cell division protease FtsH
7 Sobic.010G020800 aminotransferase, classes I and II, domain containing protein, expressed K14270: aminotransferase
8 Sobic.002G291800 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
9 Sobic.007G006200 NBS-LRR disease resistance protein, putative, expressed -
10 Sobic.004G231900 ribonuclease protein, putative, expressed K18758: DIS3-like exonuclease 2
11 Sobic.002G383600 zinc finger, C3HC4 type domain containing protein, expressed K12169: KPC1, Kip1 ubiquitination-promoting complex protein 1
12 Sobic.004G179300 chloride channel protein, putative, expressed K05016: chloride channel 7
13 Sobic.006G257800 actin-6, putative, expressed K16616: actin-related protein 8, plant
14 Sobic.008G166550 - -
15 Sobic.006G051800 calmodulin-binding transcription activator 4, putative, expressed -
16 Sobic.002G293500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sialin, putative, expressed -
17 Sobic.008G184900 resistance protein, putative, expressed -
18 Sobic.006G235300 expressed protein -
19 Sobic.004G006800 expressed protein -
20 Sobic.004G127800 AGC_PKA/PKG_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -


Gene co-expression network
sample Sobic003G301500 Sobic003G301500 Sobic004G189200 Sobic004G189200 Sobic003G301500--Sobic004G189200 Sobic008G167600 Sobic008G167600 Sobic003G301500--Sobic008G167600 Sobic002G431500 Sobic002G431500 Sobic003G301500--Sobic002G431500 Sobic001G062300 Sobic001G062300 Sobic003G301500--Sobic001G062300 Sobic010G272800 Sobic010G272800 Sobic003G301500--Sobic010G272800 Sobic010G223200 Sobic010G223200 Sobic003G301500--Sobic010G223200 Sobic010G020800 Sobic010G020800 Sobic003G301500--Sobic010G020800 Sobic002G291800 Sobic002G291800 Sobic003G301500--Sobic002G291800 Sobic007G006200 Sobic007G006200 Sobic003G301500--Sobic007G006200 Sobic006G257800 Sobic006G257800 Sobic004G189200--Sobic006G257800 Sobic004G189200--Sobic001G062300 Sobic006G051800 Sobic006G051800 Sobic004G189200--Sobic006G051800 Sobic004G189200--Sobic008G167600 Sobic007G190000 Sobic007G190000 Sobic004G189200--Sobic007G190000 Sobic004G231900 Sobic004G231900 Sobic004G189200--Sobic004G231900 Sobic004G189200--Sobic003G301500 Sobic002G383600 Sobic002G383600 Sobic004G189200--Sobic002G383600 Sobic004G179300 Sobic004G179300 Sobic004G189200--Sobic004G179300 Sobic008G167600--Sobic006G257800 Sobic004G151300 Sobic004G151300 Sobic008G167600--Sobic004G151300 Sobic008G167600--Sobic002G291800 Sobic004G312600 Sobic004G312600 Sobic008G167600--Sobic004G312600 Sobic004G127800 Sobic004G127800 Sobic008G167600--Sobic004G127800 Sobic002G293500 Sobic002G293500 Sobic008G167600--Sobic002G293500 Sobic002G081400 Sobic002G081400 Sobic008G167600--Sobic002G081400 Sobic006G090100 Sobic006G090100 Sobic008G167600--Sobic006G090100 Sobic001G333800 Sobic001G333800 Sobic008G167600--Sobic001G333800 Sobic008G166550 Sobic008G166550 Sobic002G431500--Sobic008G166550 Sobic002G129400 Sobic002G129400 Sobic002G431500--Sobic002G129400 Sobic002G431500--Sobic010G223200 Sobic002G431500--Sobic003G301500 Sobic007G166200 Sobic007G166200 Sobic002G431500--Sobic007G166200 Sobic001G243200 Sobic001G243200 Sobic002G431500--Sobic001G243200 Sobic004G338000 Sobic004G338000 Sobic002G431500--Sobic004G338000 Sobic006G235300 Sobic006G235300 Sobic002G431500--Sobic006G235300 Sobic002G431500--Sobic004G127800 Sobic001G062300--Sobic006G257800 Sobic001G062300--Sobic004G189200 Sobic006G275100 Sobic006G275100 Sobic001G062300--Sobic006G275100 Sobic001G062300--Sobic008G167600 Sobic001G062300--Sobic007G190000 Sobic004G211866 Sobic004G211866 Sobic001G062300--Sobic004G211866 Sobic001G062300--Sobic003G301500 Sobic001G062300--Sobic010G272800 Sobic001G062300--Sobic002G383600 Sobic010G272800--Sobic010G223200 Sobic010G272800--Sobic003G301500 Sobic010G272800--Sobic002G129400 Sobic010G043100 Sobic010G043100 Sobic010G272800--Sobic010G043100 Sobic010G272800--Sobic001G062300 Sobic001G223550 Sobic001G223550 Sobic010G272800--Sobic001G223550 Sobic009G241200 Sobic009G241200 Sobic010G272800--Sobic009G241200 Sobic009G011600 Sobic009G011600 Sobic010G272800--Sobic009G011600 Sobic010G272800--Sobic010G020800 Sobic002G060800 Sobic002G060800 Sobic010G223200--Sobic002G060800 Sobic010G223200--Sobic002G291800 Sobic010G223200--Sobic007G006200 Sobic002G351200 Sobic002G351200 Sobic010G223200--Sobic002G351200 Sobic004G271600 Sobic004G271600 Sobic010G223200--Sobic004G271600 Sobic004G317700 Sobic004G317700 Sobic010G223200--Sobic004G317700 Sobic002G275100 Sobic002G275100 Sobic010G223200--Sobic002G275100 Sobic010G207100 Sobic010G207100 Sobic010G223200--Sobic010G207100 Sobic002G132400 Sobic002G132400 Sobic010G223200--Sobic002G132400 Sobic003G190400 Sobic003G190400 Sobic010G020800--Sobic003G190400 Sobic001G517800 Sobic001G517800 Sobic010G020800--Sobic001G517800 Sobic004G001500 Sobic004G001500 Sobic010G020800--Sobic004G001500 Sobic010G020800--Sobic007G190000 Sobic002G146300 Sobic002G146300 Sobic010G020800--Sobic002G146300 Sobic003G301900 Sobic003G301900 Sobic010G020800--Sobic003G301900 Sobic010G020800--Sobic009G011600 Sobic001G446850 Sobic001G446850 Sobic010G020800--Sobic001G446850 Sobic006G240400 Sobic006G240400 Sobic010G020800--Sobic006G240400 Sobic002G291800--Sobic010G223200 Sobic002G291800--Sobic008G167600 Sobic003G162400 Sobic003G162400 Sobic002G291800--Sobic003G162400 Sobic002G291800--Sobic006G235300 Sobic003G440300 Sobic003G440300 Sobic002G291800--Sobic003G440300 Sobic002G291800--Sobic004G127800 Sobic004G190100 Sobic004G190100 Sobic002G291800--Sobic004G190100 Sobic002G291800--Sobic002G275100 Sobic001G112900 Sobic001G112900 Sobic002G291800--Sobic001G112900 Sobic006G191500 Sobic006G191500 Sobic007G006200--Sobic006G191500 Sobic002G161400 Sobic002G161400 Sobic007G006200--Sobic002G161400 Sobic007G006200--Sobic004G127800 Sobic007G006200--Sobic010G223200 Sobic007G006200--Sobic006G235300 Sobic003G380200 Sobic003G380200 Sobic007G006200--Sobic003G380200 Sobic007G006200--Sobic006G090100 Sobic001G077300 Sobic001G077300 Sobic007G006200--Sobic001G077300 Sobic002G119100 Sobic002G119100 Sobic007G006200--Sobic002G119100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.