Gene annotation
Transcriptome id Sobic.007G190000.3,Sobic.007G190000.1,Sobic.007G190000.4,Sobic.007G190000.2
Synonym Sb07g025960
Functional annotation expressed protein
UniProt A0A1B6PIJ5 , A0A1B6PII9 , A0A1B6PIT7 , C5YHP7
Pfam PF13889 PF13915 PF13915 PF13889
Panther DB PTHR13199 PTHR13199:SF15
NCBI CDD KOG2306; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G26890 : -
RAP-DB (Rice) LOC_Os08g42420.2,LOC_Os08g42420.3,LOC_Os08g42420.4 : expressed protein
MaizeGDB (Corn) Zm00025a005305 , Zm00025a047600
Brachypodium KQJ90957 , KQJ99161
Barley HORVU7Hr1G055100.2 , HORVU7Hr1G055100.7 , HORVU7Hr1G055100.11 , HORVU7Hr1G055100.12 , HORVU7Hr1G055100.10 , HORVU7Hr1G055100.9 , HORVU7Hr1G055100.3 , HORVU7Hr1G055100.1 , HORVU7Hr1G055100.6 , HORVU7Hr1G055100.4 , HORVU7Hr1G055100.5 , HORVU7Hr1G055100.8
Wheat TraesCS7D02G264000 , TraesCS7A02G263400 , TraesCS7A02G263400 , TraesCS7A02G263400 , TraesCS7A02G263400 , TraesCS7D02G264000
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.007G190000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G074300 smr domain containing protein, expressed -
2 Sobic.004G179300 chloride channel protein, putative, expressed K05016: chloride channel 7
3 Sobic.003G372500 DUF803 domain containing, putative, expressed -
4 Sobic.010G227100 BTB/POZ domain containing protein, putative, expressed -
5 Sobic.002G146300 cig3, putative, expressed K14409: SMG7, protein SMG7
6 Sobic.010G020800 aminotransferase, classes I and II, domain containing protein, expressed K14270: aminotransferase
7 Sobic.009G074400 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
8 Sobic.010G147100 VHS and GAT domain containing protein, expressed -
9 Sobic.004G189200 OsFBK9 - F-box domain and kelch repeat containing protein, expressed -
10 Sobic.002G243800 BPI/LBP family protein At3g20270 precursor, putative, expressed -
11 Sobic.003G301900 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
12 Sobic.004G001500 HECT-domain domain containing protein, expressed K10590: E3 ubiquitin-protein ligase TRIP12
13 Sobic.002G311100 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.004G231900 ribonuclease protein, putative, expressed K18758: DIS3-like exonuclease 2
15 Sobic.006G257800 actin-6, putative, expressed K16616: actin-related protein 8, plant
16 Sobic.003G190400 rossmann fold nucleotide-binding protein involved in DNA uptake, putative, expressed -
17 Sobic.007G075400 expressed protein -
18 Sobic.002G383600 zinc finger, C3HC4 type domain containing protein, expressed K12169: KPC1, Kip1 ubiquitination-promoting complex protein 1
19 Sobic.006G219600 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
20 Sobic.001G534700 plus-3 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic007G190000 Sobic007G190000 Sobic010G074300 Sobic010G074300 Sobic007G190000--Sobic010G074300 Sobic004G179300 Sobic004G179300 Sobic007G190000--Sobic004G179300 Sobic003G372500 Sobic003G372500 Sobic007G190000--Sobic003G372500 Sobic010G227100 Sobic010G227100 Sobic007G190000--Sobic010G227100 Sobic002G146300 Sobic002G146300 Sobic007G190000--Sobic002G146300 Sobic010G020800 Sobic010G020800 Sobic007G190000--Sobic010G020800 Sobic009G074400 Sobic009G074400 Sobic007G190000--Sobic009G074400 Sobic010G147100 Sobic010G147100 Sobic007G190000--Sobic010G147100 Sobic004G189200 Sobic004G189200 Sobic007G190000--Sobic004G189200 Sobic010G074300--Sobic010G147100 Sobic004G118200 Sobic004G118200 Sobic010G074300--Sobic004G118200 Sobic010G074300--Sobic007G190000 Sobic001G080700 Sobic001G080700 Sobic010G074300--Sobic001G080700 Sobic002G311100 Sobic002G311100 Sobic010G074300--Sobic002G311100 Sobic010G131900 Sobic010G131900 Sobic010G074300--Sobic010G131900 Sobic010G074300--Sobic009G074400 Sobic003G316500 Sobic003G316500 Sobic010G074300--Sobic003G316500 Sobic001G268200 Sobic001G268200 Sobic010G074300--Sobic001G268200 Sobic002G386100 Sobic002G386100 Sobic004G179300--Sobic002G386100 Sobic004G179300--Sobic007G190000 Sobic002G128200 Sobic002G128200 Sobic004G179300--Sobic002G128200 Sobic004G179300--Sobic004G189200 Sobic006G002300 Sobic006G002300 Sobic004G179300--Sobic006G002300 Sobic002G187700 Sobic002G187700 Sobic004G179300--Sobic002G187700 Sobic001G476700 Sobic001G476700 Sobic004G179300--Sobic001G476700 Sobic003G301900 Sobic003G301900 Sobic004G179300--Sobic003G301900 Sobic004G179300--Sobic010G020800 Sobic007G075400 Sobic007G075400 Sobic003G372500--Sobic007G075400 Sobic003G372500--Sobic010G147100 Sobic003G372500--Sobic003G316500 Sobic001G050200 Sobic001G050200 Sobic003G372500--Sobic001G050200 Sobic009G191000 Sobic009G191000 Sobic003G372500--Sobic009G191000 Sobic003G372500--Sobic010G227100 Sobic001G534700 Sobic001G534700 Sobic003G372500--Sobic001G534700 Sobic003G313500 Sobic003G313500 Sobic003G372500--Sobic003G313500 Sobic001G390800 Sobic001G390800 Sobic003G372500--Sobic001G390800 Sobic002G243800 Sobic002G243800 Sobic010G227100--Sobic002G243800 Sobic002G383600 Sobic002G383600 Sobic010G227100--Sobic002G383600 Sobic010G227100--Sobic003G372500 Sobic006G275100 Sobic006G275100 Sobic010G227100--Sobic006G275100 Sobic010G227100--Sobic007G190000 Sobic010G227100--Sobic007G075400 Sobic010G227100--Sobic002G146300 Sobic010G227100--Sobic009G074400 Sobic009G053900 Sobic009G053900 Sobic010G227100--Sobic009G053900 Sobic003G205200 Sobic003G205200 Sobic002G146300--Sobic003G205200 Sobic001G370900 Sobic001G370900 Sobic002G146300--Sobic001G370900 Sobic010G139600 Sobic010G139600 Sobic002G146300--Sobic010G139600 Sobic005G001000 Sobic005G001000 Sobic002G146300--Sobic005G001000 Sobic004G001500 Sobic004G001500 Sobic002G146300--Sobic004G001500 Sobic008G001200 Sobic008G001200 Sobic002G146300--Sobic008G001200 Sobic001G194200 Sobic001G194200 Sobic002G146300--Sobic001G194200 Sobic002G146300--Sobic007G075400 Sobic009G256400 Sobic009G256400 Sobic002G146300--Sobic009G256400 Sobic003G190400 Sobic003G190400 Sobic010G020800--Sobic003G190400 Sobic001G517800 Sobic001G517800 Sobic010G020800--Sobic001G517800 Sobic010G020800--Sobic004G001500 Sobic010G020800--Sobic007G190000 Sobic010G020800--Sobic002G146300 Sobic010G020800--Sobic003G301900 Sobic009G011600 Sobic009G011600 Sobic010G020800--Sobic009G011600 Sobic001G446850 Sobic001G446850 Sobic010G020800--Sobic001G446850 Sobic006G240400 Sobic006G240400 Sobic010G020800--Sobic006G240400 Sobic009G074400--Sobic003G316500 Sobic009G074400--Sobic001G534700 Sobic003G155100 Sobic003G155100 Sobic009G074400--Sobic003G155100 Sobic003G198800 Sobic003G198800 Sobic009G074400--Sobic003G198800 Sobic009G074400--Sobic002G311100 Sobic006G051800 Sobic006G051800 Sobic009G074400--Sobic006G051800 Sobic006G219600 Sobic006G219600 Sobic009G074400--Sobic006G219600 Sobic009G074400--Sobic008G001200 Sobic009G074400--Sobic004G001500 Sobic010G147100--Sobic003G316500 Sobic010G278200 Sobic010G278200 Sobic010G147100--Sobic010G278200 Sobic010G147100--Sobic010G074300 Sobic010G147100--Sobic003G313500 Sobic010G147100--Sobic001G390800 Sobic010G147100--Sobic002G311100 Sobic010G147100--Sobic009G053900 Sobic010G147100--Sobic001G268200 Sobic003G118200 Sobic003G118200 Sobic010G147100--Sobic003G118200 Sobic006G257800 Sobic006G257800 Sobic004G189200--Sobic006G257800 Sobic001G062300 Sobic001G062300 Sobic004G189200--Sobic001G062300 Sobic004G189200--Sobic006G051800 Sobic008G167600 Sobic008G167600 Sobic004G189200--Sobic008G167600 Sobic004G189200--Sobic007G190000 Sobic004G231900 Sobic004G231900 Sobic004G189200--Sobic004G231900 Sobic003G301500 Sobic003G301500 Sobic004G189200--Sobic003G301500 Sobic004G189200--Sobic002G383600 Sobic004G189200--Sobic004G179300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.