Gene annotation
Transcriptome id Sobic.002G243800.1
Synonym Sb02g028080
Functional annotation BPI/LBP family protein At3g20270 precursor, putative, expressed
UniProt C5X3U2
Pfam PF01273 PF02886
Panther DB PTHR10504 PTHR10504:SF81
NCBI CDD KOG4160; BPI/LBP/CETP family protein
KEGG Orthology -
Gene Ontology GO:0008289; lipid binding


Orthologs (automatic annotation)
TAIR AT1G04970 : lipid-binding serum glycoprotein family protein
RAP-DB (Rice) LOC_Os09g30474.1 : BPI/LBP family protein At3g20270 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a047416
Brachypodium KQJ90714 , PNT64813 , PNT64812 , PNT64817 , PNT64816 , PNT64815 , PNT64814
Barley -
Wheat TraesCS5B02G259600 , TraesCS5D02G268700 , TraesCS5A02G261300
Populus -


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cDNA sequences
Sobic.002G243800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G146300 cig3, putative, expressed K14409: SMG7, protein SMG7
2 Sobic.010G227100 BTB/POZ domain containing protein, putative, expressed -
3 Sobic.004G001500 HECT-domain domain containing protein, expressed K10590: E3 ubiquitin-protein ligase TRIP12
4 Sobic.007G190000 expressed protein -
5 Sobic.005G001000 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
6 Sobic.010G139600 STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
7 Sobic.004G356700 oligopeptidase, putative, expressed K01414: oligopeptidase A
8 Sobic.007G075400 expressed protein -
9 Sobic.009G053900 HECT-domain domain containing protein, expressed K10589: ubiquitin-protein ligase E3 C
10 Sobic.010G009200 AMP-binding enzyme family protein, expressed K00142: acyl-CoA synthetase
11 Sobic.001G085300 phytosulfokine receptor precursor, putative, expressed -
12 Sobic.003G195000 OsFtsH5 FtsH protease, homologue of AtFtsH4, expressed K08955: ATP-dependent metalloprotease
13 Sobic.005G187300 lipin, N-terminal conserved region family protein, expressed K15728: phosphatidate phosphatase LPIN
14 Sobic.004G223000 MIF4G domain containing protein, putative, expressed K14327: UPF2, regulator of nonsense transcripts 2
15 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
16 Sobic.003G205200 expressed protein K19027: zinc finger FYVE domain-containing protein 26
17 Sobic.001G534700 plus-3 domain containing protein, putative, expressed -
18 Sobic.007G133700 expressed protein -
19 Sobic.002G383600 zinc finger, C3HC4 type domain containing protein, expressed K12169: KPC1, Kip1 ubiquitination-promoting complex protein 1
20 Sobic.001G370900 expressed protein K11665: INO80, DNA helicase INO80


Gene co-expression network
sample Sobic002G243800 Sobic002G243800 Sobic002G146300 Sobic002G146300 Sobic002G243800--Sobic002G146300 Sobic010G227100 Sobic010G227100 Sobic002G243800--Sobic010G227100 Sobic004G001500 Sobic004G001500 Sobic002G243800--Sobic004G001500 Sobic007G190000 Sobic007G190000 Sobic002G243800--Sobic007G190000 Sobic005G001000 Sobic005G001000 Sobic002G243800--Sobic005G001000 Sobic010G139600 Sobic010G139600 Sobic002G243800--Sobic010G139600 Sobic004G356700 Sobic004G356700 Sobic002G243800--Sobic004G356700 Sobic007G075400 Sobic007G075400 Sobic002G243800--Sobic007G075400 Sobic009G053900 Sobic009G053900 Sobic002G243800--Sobic009G053900 Sobic003G205200 Sobic003G205200 Sobic002G146300--Sobic003G205200 Sobic001G370900 Sobic001G370900 Sobic002G146300--Sobic001G370900 Sobic002G146300--Sobic010G139600 Sobic002G146300--Sobic005G001000 Sobic002G146300--Sobic004G001500 Sobic008G001200 Sobic008G001200 Sobic002G146300--Sobic008G001200 Sobic001G194200 Sobic001G194200 Sobic002G146300--Sobic001G194200 Sobic002G146300--Sobic007G075400 Sobic009G256400 Sobic009G256400 Sobic002G146300--Sobic009G256400 Sobic010G227100--Sobic002G243800 Sobic002G383600 Sobic002G383600 Sobic010G227100--Sobic002G383600 Sobic003G372500 Sobic003G372500 Sobic010G227100--Sobic003G372500 Sobic006G275100 Sobic006G275100 Sobic010G227100--Sobic006G275100 Sobic010G227100--Sobic007G190000 Sobic010G227100--Sobic007G075400 Sobic010G227100--Sobic002G146300 Sobic009G074400 Sobic009G074400 Sobic010G227100--Sobic009G074400 Sobic010G227100--Sobic009G053900 Sobic004G001500--Sobic002G146300 Sobic003G043200 Sobic003G043200 Sobic004G001500--Sobic003G043200 Sobic005G187300 Sobic005G187300 Sobic004G001500--Sobic005G187300 Sobic004G001500--Sobic001G370900 Sobic001G457800 Sobic001G457800 Sobic004G001500--Sobic001G457800 Sobic004G001500--Sobic009G256400 Sobic003G166750 Sobic003G166750 Sobic004G001500--Sobic003G166750 Sobic004G001500--Sobic004G356700 Sobic001G527800 Sobic001G527800 Sobic004G001500--Sobic001G527800 Sobic010G074300 Sobic010G074300 Sobic007G190000--Sobic010G074300 Sobic004G179300 Sobic004G179300 Sobic007G190000--Sobic004G179300 Sobic007G190000--Sobic003G372500 Sobic007G190000--Sobic010G227100 Sobic007G190000--Sobic002G146300 Sobic010G020800 Sobic010G020800 Sobic007G190000--Sobic010G020800 Sobic007G190000--Sobic009G074400 Sobic010G147100 Sobic010G147100 Sobic007G190000--Sobic010G147100 Sobic004G189200 Sobic004G189200 Sobic007G190000--Sobic004G189200 Sobic005G001000--Sobic001G194200 Sobic002G008900 Sobic002G008900 Sobic005G001000--Sobic002G008900 Sobic005G001000--Sobic001G370900 Sobic005G001000--Sobic003G205200 Sobic004G291900 Sobic004G291900 Sobic005G001000--Sobic004G291900 Sobic003G186000 Sobic003G186000 Sobic005G001000--Sobic003G186000 Sobic005G001000--Sobic008G001200 Sobic003G422500 Sobic003G422500 Sobic005G001000--Sobic003G422500 Sobic005G001000--Sobic009G256400 Sobic010G139600--Sobic007G075400 Sobic010G139600--Sobic002G146300 Sobic010G139600--Sobic003G205200 Sobic008G098900 Sobic008G098900 Sobic010G139600--Sobic008G098900 Sobic003G313500 Sobic003G313500 Sobic010G139600--Sobic003G313500 Sobic010G139600--Sobic005G001000 Sobic010G139600--Sobic001G194200 Sobic010G139600--Sobic003G422500 Sobic010G139600--Sobic001G370900 Sobic004G356700--Sobic008G001200 Sobic004G356700--Sobic001G194200 Sobic004G356700--Sobic002G146300 Sobic004G356700--Sobic004G001500 Sobic004G356700--Sobic009G256400 Sobic004G244900 Sobic004G244900 Sobic004G356700--Sobic004G244900 Sobic003G155100 Sobic003G155100 Sobic004G356700--Sobic003G155100 Sobic006G219600 Sobic006G219600 Sobic004G356700--Sobic006G219600 Sobic004G334300 Sobic004G334300 Sobic004G356700--Sobic004G334300 Sobic007G075400--Sobic010G139600 Sobic007G075400--Sobic009G053900 Sobic004G331100 Sobic004G331100 Sobic007G075400--Sobic004G331100 Sobic007G075400--Sobic002G008900 Sobic009G191000 Sobic009G191000 Sobic007G075400--Sobic009G191000 Sobic007G075400--Sobic002G146300 Sobic007G075400--Sobic003G422500 Sobic007G075400--Sobic003G313500 Sobic004G065000 Sobic004G065000 Sobic007G075400--Sobic004G065000 Sobic009G053900--Sobic009G191000 Sobic003G118200 Sobic003G118200 Sobic009G053900--Sobic003G118200 Sobic009G053900--Sobic002G008900 Sobic009G053900--Sobic003G422500 Sobic001G365900 Sobic001G365900 Sobic009G053900--Sobic001G365900 Sobic001G289600 Sobic001G289600 Sobic009G053900--Sobic001G289600 Sobic010G206900 Sobic010G206900 Sobic009G053900--Sobic010G206900 Sobic009G053900--Sobic007G075400 Sobic001G540400 Sobic001G540400 Sobic009G053900--Sobic001G540400
Octagon: transcription factors


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