Gene annotation
Transcriptome id Sobic.004G214800.2
Synonym EFR, Sb04g026000
Functional annotation receptor-like protein kinase 5 precursor, putative, expressed
UniProt A0A1Z5RNZ0
Pfam PF08263 PF00560 PF13855
Panther DB PTHR27000 PTHR27000:SF82
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G20480 : EF-TU receptor
RAP-DB (Rice) LOC_Os02g40180.1 : receptor-like protein kinase 5 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a031970 , Zm00025a031965
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G326000 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
2 Sobic.002G052100 early light-induced protein, chloroplast precursor, putative, expressed -
3 Sobic.001G181100 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@SCARECROW, putative, expressed -
4 Sobic.010G271800 leucine zipper protein-like, putative, expressed -
5 Sobic.005G002400 expressed protein -
6 Sobic.001G112900 expressed protein -
7 Sobic.006G020300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
8 Sobic.003G339200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.003G175800 - -
10 Sobic.002G052000 early light-induced protein, chloroplast precursor, putative, expressed -
11 Sobic.003G154400 OsSCP3 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
12 Sobic.008G002400 expressed protein -
13 Sobic.002G338800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
14 Sobic.003G162400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.004G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CPuORF19 - conserved peptide uORF-containing transcript, expressed -
16 Sobic.004G344600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
17 Sobic.003G188200 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
18 Sobic.010G113200 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed -
19 Sobic.003G304300 expressed protein -
20 Sobic.002G108500 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic004G214800 Sobic004G214800 Sobic003G326000 Sobic003G326000 Sobic004G214800--Sobic003G326000 Sobic002G052100 Sobic002G052100 Sobic004G214800--Sobic002G052100 Sobic001G181100 Sobic001G181100 Sobic004G214800--Sobic001G181100 Sobic010G271800 Sobic010G271800 Sobic004G214800--Sobic010G271800 Sobic005G002400 Sobic005G002400 Sobic004G214800--Sobic005G002400 Sobic001G112900 Sobic001G112900 Sobic004G214800--Sobic001G112900 Sobic006G020300 Sobic006G020300 Sobic004G214800--Sobic006G020300 Sobic003G339200 Sobic003G339200 Sobic004G214800--Sobic003G339200 Sobic003G175800 Sobic003G175800 Sobic004G214800--Sobic003G175800 Sobic003G326000--Sobic010G271800 Sobic003G326000--Sobic005G002400 Sobic003G326000--Sobic004G214800 Sobic008G002400 Sobic008G002400 Sobic003G326000--Sobic008G002400 Sobic003G326000--Sobic001G181100 Sobic003G326000--Sobic002G052100 Sobic004G190100 Sobic004G190100 Sobic003G326000--Sobic004G190100 Sobic003G326000--Sobic001G112900 Sobic006G154800 Sobic006G154800 Sobic003G326000--Sobic006G154800 Sobic002G052000 Sobic002G052000 Sobic002G052100--Sobic002G052000 Sobic002G052100--Sobic001G181100 Sobic002G052100--Sobic004G214800 Sobic002G052100--Sobic005G002400 Sobic002G052100--Sobic003G175800 Sobic003G154400 Sobic003G154400 Sobic002G052100--Sobic003G154400 Sobic002G052100--Sobic006G020300 Sobic002G052100--Sobic003G326000 Sobic002G052100--Sobic010G271800 Sobic001G181100--Sobic002G052100 Sobic001G181100--Sobic005G002400 Sobic001G181100--Sobic003G326000 Sobic001G181100--Sobic010G271800 Sobic001G181100--Sobic004G214800 Sobic001G181100--Sobic002G052000 Sobic001G181100--Sobic003G175800 Sobic001G181100--Sobic008G002400 Sobic001G181100--Sobic006G020300 Sobic010G271800--Sobic003G326000 Sobic010G271800--Sobic001G181100 Sobic010G271800--Sobic005G002400 Sobic010G271800--Sobic002G052100 Sobic010G271800--Sobic004G214800 Sobic010G271800--Sobic008G002400 Sobic010G271800--Sobic006G154800 Sobic010G271800--Sobic004G190100 Sobic010G271800--Sobic001G112900 Sobic005G002400--Sobic008G002400 Sobic005G002400--Sobic003G326000 Sobic005G002400--Sobic001G112900 Sobic005G002400--Sobic001G181100 Sobic005G002400--Sobic002G052100 Sobic005G002400--Sobic004G190100 Sobic005G002400--Sobic010G271800 Sobic005G002400--Sobic006G020300 Sobic005G002400--Sobic003G154400 Sobic001G112900--Sobic003G339200 Sobic004G344600 Sobic004G344600 Sobic001G112900--Sobic004G344600 Sobic003G304300 Sobic003G304300 Sobic001G112900--Sobic003G304300 Sobic002G161400 Sobic002G161400 Sobic001G112900--Sobic002G161400 Sobic010G113200 Sobic010G113200 Sobic001G112900--Sobic010G113200 Sobic001G112900--Sobic005G002400 Sobic006G191500 Sobic006G191500 Sobic001G112900--Sobic006G191500 Sobic003G162400 Sobic003G162400 Sobic001G112900--Sobic003G162400 Sobic010G104700 Sobic010G104700 Sobic001G112900--Sobic010G104700 Sobic001G434000 Sobic001G434000 Sobic006G020300--Sobic001G434000 Sobic006G020300--Sobic005G002400 Sobic006G020300--Sobic002G052100 Sobic006G020300--Sobic003G154400 Sobic006G020300--Sobic003G175800 Sobic006G020300--Sobic003G326000 Sobic006G020300--Sobic004G214800 Sobic006G020300--Sobic010G104700 Sobic006G020300--Sobic001G181100 Sobic003G339200--Sobic001G112900 Sobic003G339200--Sobic004G344600 Sobic003G339200--Sobic002G161400 Sobic003G339200--Sobic003G304300 Sobic003G339200--Sobic010G113200 Sobic009G246400 Sobic009G246400 Sobic003G339200--Sobic009G246400 Sobic003G339200--Sobic003G162400 Sobic003G339200--Sobic006G191500 Sobic003G339200--Sobic010G104700 Sobic003G175800--Sobic002G052100 Sobic003G175800--Sobic006G020300 Sobic003G175800--Sobic001G181100 Sobic003G175800--Sobic005G002400 Sobic003G175800--Sobic003G154400 Sobic003G175800--Sobic002G052000 Sobic003G175800--Sobic008G002400 Sobic001G181000 Sobic001G181000 Sobic003G175800--Sobic001G181000 Sobic003G175800--Sobic004G214800
Octagon: transcription factors


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