Gene annotation
Transcriptome id Sobic.001G313000.1
Synonym PMI1, Sb01g030440
Functional annotation expressed protein
UniProt C5WTL3
Pfam PF10358
Panther DB PTHR33414:SF3 PTHR33414
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G42550 : plastid movement impaired1
RAP-DB (Rice) LOC_Os10g39430.1 : expressed protein
MaizeGDB (Corn) Zm00025a003186
Brachypodium PNT67785
Barley HORVU1Hr1G052010.1
Wheat -
Populus -


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cDNA sequences
Sobic.001G313000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G112900 expressed protein -
2 Sobic.001G104900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@peptidase, M50 family, putative, expressed -
3 Sobic.003G339200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.004G344600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
5 Sobic.007G121300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@cleavage and polyadenylation specificity factor subunit 5, putative, expressed K14397: NUDT21, CPSF5, cleavage and polyadenylation specificity factor subunit 5
6 Sobic.003G304300 expressed protein -
7 Sobic.003G340300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nodulin, putative, expressed -
8 Sobic.003G188200 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
9 Sobic.010G183600 bZIP transcription factor domain containing protein, expressed K16241: transcription factor HY5
10 Sobic.004G267700 hydrolase, alpha/beta fold family domain containing protein, expressed -
11 Sobic.002G161400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
12 Sobic.004G214800 receptor-like protein kinase 5 precursor, putative, expressed -
13 Sobic.006G041000 "Oxidoreductase, zinc-binding dehydrogenase family protein"("PubMedID : 26759170,PubMedID : 24597475")@dehydrogenase, putative, expressed -
14 Sobic.009G259100 CCT motif family protein, expressed -
15 Sobic.003G428600 amidohydrolase, putative, expressed K07047: N-substituted formamide deformylase
16 Sobic.002G338800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
17 Sobic.006G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
18 Sobic.007G065600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carotenoid synthesis regulator CarF, putative, expressed K10704: ubiquitin-conjugating enzyme E2 variant
19 Sobic.006G188200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fatty acid hydroxylase, putative, expressed K15746: beta-carotene 3-hydroxylase
20 Sobic.008G115700 MLA12, putative, expressed -


Gene co-expression network
sample Sobic001G313000 Sobic001G313000 Sobic001G112900 Sobic001G112900 Sobic001G313000--Sobic001G112900 Sobic001G104900 Sobic001G104900 Sobic001G313000--Sobic001G104900 Sobic003G339200 Sobic003G339200 Sobic001G313000--Sobic003G339200 Sobic004G344600 Sobic004G344600 Sobic001G313000--Sobic004G344600 Sobic007G121300 Sobic007G121300 Sobic001G313000--Sobic007G121300 Sobic003G304300 Sobic003G304300 Sobic001G313000--Sobic003G304300 Sobic003G340300 Sobic003G340300 Sobic001G313000--Sobic003G340300 Sobic003G188200 Sobic003G188200 Sobic001G313000--Sobic003G188200 Sobic010G183600 Sobic010G183600 Sobic001G313000--Sobic010G183600 Sobic001G112900--Sobic003G339200 Sobic001G112900--Sobic004G344600 Sobic001G112900--Sobic003G304300 Sobic002G161400 Sobic002G161400 Sobic001G112900--Sobic002G161400 Sobic010G113200 Sobic010G113200 Sobic001G112900--Sobic010G113200 Sobic005G002400 Sobic005G002400 Sobic001G112900--Sobic005G002400 Sobic006G191500 Sobic006G191500 Sobic001G112900--Sobic006G191500 Sobic003G162400 Sobic003G162400 Sobic001G112900--Sobic003G162400 Sobic010G104700 Sobic010G104700 Sobic001G112900--Sobic010G104700 Sobic002G338800 Sobic002G338800 Sobic001G104900--Sobic002G338800 Sobic004G323400 Sobic004G323400 Sobic001G104900--Sobic004G323400 Sobic009G245000 Sobic009G245000 Sobic001G104900--Sobic009G245000 Sobic001G104900--Sobic001G112900 Sobic001G104900--Sobic001G313000 Sobic006G041000 Sobic006G041000 Sobic001G104900--Sobic006G041000 Sobic002G052000 Sobic002G052000 Sobic001G104900--Sobic002G052000 Sobic002G295100 Sobic002G295100 Sobic001G104900--Sobic002G295100 Sobic003G186800 Sobic003G186800 Sobic001G104900--Sobic003G186800 Sobic003G339200--Sobic001G112900 Sobic003G339200--Sobic004G344600 Sobic003G339200--Sobic002G161400 Sobic003G339200--Sobic003G304300 Sobic003G339200--Sobic010G113200 Sobic009G246400 Sobic009G246400 Sobic003G339200--Sobic009G246400 Sobic003G339200--Sobic003G162400 Sobic003G339200--Sobic006G191500 Sobic003G339200--Sobic010G104700 Sobic004G344600--Sobic002G161400 Sobic004G344600--Sobic001G112900 Sobic004G344600--Sobic003G339200 Sobic004G344600--Sobic003G304300 Sobic004G344600--Sobic006G191500 Sobic004G344600--Sobic010G104700 Sobic001G485100 Sobic001G485100 Sobic004G344600--Sobic001G485100 Sobic004G128900 Sobic004G128900 Sobic004G344600--Sobic004G128900 Sobic004G344600--Sobic009G246400 Sobic007G121300--Sobic004G128900 Sobic007G121300--Sobic002G161400 Sobic007G121300--Sobic004G344600 Sobic001G331600 Sobic001G331600 Sobic007G121300--Sobic001G331600 Sobic007G121300--Sobic003G340300 Sobic009G259100 Sobic009G259100 Sobic007G121300--Sobic009G259100 Sobic007G121300--Sobic006G191500 Sobic007G121300--Sobic001G485100 Sobic004G035100 Sobic004G035100 Sobic007G121300--Sobic004G035100 Sobic004G267700 Sobic004G267700 Sobic003G304300--Sobic004G267700 Sobic003G304300--Sobic006G191500 Sobic002G351200 Sobic002G351200 Sobic003G304300--Sobic002G351200 Sobic003G304300--Sobic002G161400 Sobic003G304300--Sobic004G344600 Sobic003G304300--Sobic001G112900 Sobic003G304300--Sobic003G186800 Sobic003G380200 Sobic003G380200 Sobic003G304300--Sobic003G380200 Sobic004G268400 Sobic004G268400 Sobic003G304300--Sobic004G268400 Sobic003G340300--Sobic004G035100 Sobic003G340300--Sobic004G344600 Sobic003G340300--Sobic002G161400 Sobic003G340300--Sobic004G128900 Sobic003G340300--Sobic003G339200 Sobic003G340300--Sobic007G121300 Sobic003G340300--Sobic009G246400 Sobic007G065600 Sobic007G065600 Sobic003G340300--Sobic007G065600 Sobic003G340300--Sobic006G191500 Sobic003G188200--Sobic002G052000 Sobic002G052100 Sobic002G052100 Sobic003G188200--Sobic002G052100 Sobic003G440300 Sobic003G440300 Sobic003G188200--Sobic003G440300 Sobic003G326000 Sobic003G326000 Sobic003G188200--Sobic003G326000 Sobic003G188200--Sobic005G002400 Sobic001G181100 Sobic001G181100 Sobic003G188200--Sobic001G181100 Sobic004G190100 Sobic004G190100 Sobic003G188200--Sobic004G190100 Sobic003G188200--Sobic004G323400 Sobic008G002400 Sobic008G002400 Sobic003G188200--Sobic008G002400 Sobic010G183600--Sobic003G440300 Sobic010G183600--Sobic001G112900 Sobic009G016000 Sobic009G016000 Sobic010G183600--Sobic009G016000 Sobic010G183600--Sobic001G313000 Sobic006G150800 Sobic006G150800 Sobic010G183600--Sobic006G150800 Sobic005G176100 Sobic005G176100 Sobic010G183600--Sobic005G176100 Sobic010G183600--Sobic003G339200 Sobic006G154800 Sobic006G154800 Sobic010G183600--Sobic006G154800 Sobic010G183600--Sobic007G121300
Octagon: transcription factors


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