Gene annotation
Transcriptome id Sobic.003G340300.1
Synonym Sb03g038420
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
nodulin, putative, expressed
UniProt C5XNC4
Pfam PF06813
Panther DB PTHR21576 PTHR21576:SF36
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G30300 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os01g61010.1 : nodulin, putative, expressed
MaizeGDB (Corn) Zm00025a039757 , Zm00025a027033 , Zm00025a043980
Brachypodium KQK10378 , KQK05775
Barley HORVU3Hr1G045610.3 , HORVU3Hr1G045610.2 , HORVU3Hr1G045610.1 , HORVU1Hr1G070190.2 , HORVU1Hr1G070190.3 , HORVU1Hr1G070190.1 , HORVU1Hr1G070190.4 , HORVU1Hr1G070190.5 , HORVU3Hr1G088320.1
Wheat TraesCS3D02G005100 , TraesCS3A02G346400 , TraesCS1A02G299200 , TraesCS3B02G378200 , TraesCS7A02G000800 , TraesCS1D02G292000 , TraesCS3D02G340100 , TraesCS1B02G309000
Populus -


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cDNA sequences
Sobic.003G340300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G035100 UOS1, putative, expressed -
2 Sobic.004G344600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
3 Sobic.002G161400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
4 Sobic.004G128900 GTP-binding protein typA/bipA, putative, expressed K06207: typA, GTP-binding protein
5 Sobic.003G339200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.007G121300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@cleavage and polyadenylation specificity factor subunit 5, putative, expressed K14397: NUDT21, CPSF5, cleavage and polyadenylation specificity factor subunit 5
7 Sobic.009G246400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyprenyl synthetase, putative, expressed K05356: SPS, all-trans-nonaprenyl-diphosphate synthase
8 Sobic.007G065600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carotenoid synthesis regulator CarF, putative, expressed K10704: ubiquitin-conjugating enzyme E2 variant
9 Sobic.006G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
10 Sobic.006G161500 elongation factor, putative, expressed K02355: fusA, GFM, elongation factor G
11 Sobic.004G322600 Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain(PubMedID : 26465154)@protein kinase domain containing protein, expressed -
12 Sobic.003G304300 expressed protein -
13 Sobic.001G112900 expressed protein -
14 Sobic.001G485100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.009G259100 CCT motif family protein, expressed -
16 Sobic.003G380200 SNARE associated Golgi protein, putative, expressed -
17 Sobic.006G235300 expressed protein -
18 Sobic.001G331600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATP-dependent protease, putative, expressed -
19 Sobic.006G235400 ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
20 Sobic.004G127800 AGC_PKA/PKG_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -


Gene co-expression network
sample Sobic003G340300 Sobic003G340300 Sobic004G035100 Sobic004G035100 Sobic003G340300--Sobic004G035100 Sobic004G344600 Sobic004G344600 Sobic003G340300--Sobic004G344600 Sobic002G161400 Sobic002G161400 Sobic003G340300--Sobic002G161400 Sobic004G128900 Sobic004G128900 Sobic003G340300--Sobic004G128900 Sobic003G339200 Sobic003G339200 Sobic003G340300--Sobic003G339200 Sobic007G121300 Sobic007G121300 Sobic003G340300--Sobic007G121300 Sobic009G246400 Sobic009G246400 Sobic003G340300--Sobic009G246400 Sobic007G065600 Sobic007G065600 Sobic003G340300--Sobic007G065600 Sobic006G191500 Sobic006G191500 Sobic003G340300--Sobic006G191500 Sobic006G161500 Sobic006G161500 Sobic004G035100--Sobic006G161500 Sobic004G035100--Sobic003G340300 Sobic004G035100--Sobic002G161400 Sobic004G322600 Sobic004G322600 Sobic004G035100--Sobic004G322600 Sobic004G035100--Sobic004G128900 Sobic004G035100--Sobic003G339200 Sobic004G035100--Sobic004G344600 Sobic004G035100--Sobic007G065600 Sobic004G035100--Sobic006G191500 Sobic004G344600--Sobic002G161400 Sobic001G112900 Sobic001G112900 Sobic004G344600--Sobic001G112900 Sobic004G344600--Sobic003G339200 Sobic003G304300 Sobic003G304300 Sobic004G344600--Sobic003G304300 Sobic004G344600--Sobic006G191500 Sobic010G104700 Sobic010G104700 Sobic004G344600--Sobic010G104700 Sobic001G485100 Sobic001G485100 Sobic004G344600--Sobic001G485100 Sobic004G344600--Sobic004G128900 Sobic004G344600--Sobic009G246400 Sobic002G161400--Sobic006G191500 Sobic002G161400--Sobic004G344600 Sobic002G161400--Sobic004G128900 Sobic002G161400--Sobic003G304300 Sobic002G161400--Sobic001G485100 Sobic004G153900 Sobic004G153900 Sobic002G161400--Sobic004G153900 Sobic002G161400--Sobic003G339200 Sobic003G380200 Sobic003G380200 Sobic002G161400--Sobic003G380200 Sobic002G161400--Sobic001G112900 Sobic004G128900--Sobic002G161400 Sobic004G128900--Sobic004G153900 Sobic004G128900--Sobic006G191500 Sobic006G235400 Sobic006G235400 Sobic004G128900--Sobic006G235400 Sobic004G128900--Sobic006G161500 Sobic004G128900--Sobic004G344600 Sobic004G128900--Sobic003G380200 Sobic001G331600 Sobic001G331600 Sobic004G128900--Sobic001G331600 Sobic004G128900--Sobic001G485100 Sobic003G339200--Sobic001G112900 Sobic003G339200--Sobic004G344600 Sobic003G339200--Sobic002G161400 Sobic003G339200--Sobic003G304300 Sobic010G113200 Sobic010G113200 Sobic003G339200--Sobic010G113200 Sobic003G339200--Sobic009G246400 Sobic003G162400 Sobic003G162400 Sobic003G339200--Sobic003G162400 Sobic003G339200--Sobic006G191500 Sobic003G339200--Sobic010G104700 Sobic007G121300--Sobic004G128900 Sobic007G121300--Sobic002G161400 Sobic007G121300--Sobic004G344600 Sobic007G121300--Sobic001G331600 Sobic007G121300--Sobic003G340300 Sobic009G259100 Sobic009G259100 Sobic007G121300--Sobic009G259100 Sobic007G121300--Sobic006G191500 Sobic007G121300--Sobic001G485100 Sobic007G121300--Sobic004G035100 Sobic009G246400--Sobic002G161400 Sobic009G246400--Sobic004G344600 Sobic009G246400--Sobic003G304300 Sobic009G246400--Sobic003G339200 Sobic009G246400--Sobic004G128900 Sobic009G246400--Sobic001G112900 Sobic009G246400--Sobic006G191500 Sobic009G246400--Sobic010G113200 Sobic010G100900 Sobic010G100900 Sobic009G246400--Sobic010G100900 Sobic007G065600--Sobic001G485100 Sobic007G065600--Sobic004G344600 Sobic007G065600--Sobic002G161400 Sobic007G065600--Sobic006G191500 Sobic007G065600--Sobic004G128900 Sobic007G065600--Sobic006G161500 Sobic003G228300 Sobic003G228300 Sobic007G065600--Sobic003G228300 Sobic007G065600--Sobic003G380200 Sobic003G186800 Sobic003G186800 Sobic007G065600--Sobic003G186800 Sobic006G191500--Sobic002G161400 Sobic006G191500--Sobic003G380200 Sobic006G191500--Sobic001G485100 Sobic006G191500--Sobic003G304300 Sobic006G191500--Sobic004G128900 Sobic006G191500--Sobic004G344600 Sobic006G191500--Sobic003G186800 Sobic006G191500--Sobic010G100900 Sobic001G046000 Sobic001G046000 Sobic006G191500--Sobic001G046000
Octagon: transcription factors


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