Gene annotation
Transcriptome id Sobic.010G183600.2
Synonym TED5, HY5, Sb10g023420
Functional annotation bZIP transcription factor domain containing protein, expressed
UniProt A0A1W0VTR7
Pfam PF00170
Panther DB PTHR13301 PTHR13301:SF68
NCBI CDD -
KEGG Orthology K16241; transcription factor HY5
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT5G11260 : Basic-leucine zipper (bZIP) transcription factor family protein
RAP-DB (Rice) LOC_Os02g10860.1 : bZIP transcription factor domain containing protein, expressed
MaizeGDB (Corn) Zm00025a051192 , Zm00025a023231 , Zm00025a056198 , Zm00025a035730
Brachypodium KQK17780
Barley -
Wheat TraesCS7A02G373800
Populus -


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cDNA sequences
Sobic.010G183600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G440300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.001G112900 expressed protein -
3 Sobic.009G016000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
4 Sobic.001G313000 expressed protein -
5 Sobic.006G150800 gibberellin 2-beta-dioxygenase 7, putative, expressed K04125: gibberellin 2beta-dioxygenase
6 Sobic.005G176100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mannose-6-phosphate isomerase, putative, expressed K01809: manA, mannose-6-phosphate isomerase
7 Sobic.003G339200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.006G154800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.007G121300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@cleavage and polyadenylation specificity factor subunit 5, putative, expressed K14397: NUDT21, CPSF5, cleavage and polyadenylation specificity factor subunit 5
10 Sobic.003G428600 amidohydrolase, putative, expressed K07047: N-substituted formamide deformylase
11 Sobic.004G344600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
12 Sobic.004G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CPuORF19 - conserved peptide uORF-containing transcript, expressed -
13 Sobic.003G426900 proline synthetase co-transcribed bacterial homolog protein, putative, expressed K06997: yggS, PLP dependent protein
14 Sobic.003G326000 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
15 Sobic.003G188200 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
16 Sobic.003G162400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.004G214800 receptor-like protein kinase 5 precursor, putative, expressed -
18 Sobic.002G161400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
19 Sobic.003G340300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nodulin, putative, expressed -
20 Sobic.010G113200 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed -


Gene co-expression network
sample Sobic010G183600 Sobic010G183600 Sobic003G440300 Sobic003G440300 Sobic010G183600--Sobic003G440300 Sobic001G112900 Sobic001G112900 Sobic010G183600--Sobic001G112900 Sobic009G016000 Sobic009G016000 Sobic010G183600--Sobic009G016000 Sobic001G313000 Sobic001G313000 Sobic010G183600--Sobic001G313000 Sobic006G150800 Sobic006G150800 Sobic010G183600--Sobic006G150800 Sobic005G176100 Sobic005G176100 Sobic010G183600--Sobic005G176100 Sobic003G339200 Sobic003G339200 Sobic010G183600--Sobic003G339200 Sobic006G154800 Sobic006G154800 Sobic010G183600--Sobic006G154800 Sobic007G121300 Sobic007G121300 Sobic010G183600--Sobic007G121300 Sobic004G190100 Sobic004G190100 Sobic003G440300--Sobic004G190100 Sobic003G162400 Sobic003G162400 Sobic003G440300--Sobic003G162400 Sobic003G326000 Sobic003G326000 Sobic003G440300--Sobic003G326000 Sobic003G188200 Sobic003G188200 Sobic003G440300--Sobic003G188200 Sobic002G291800 Sobic002G291800 Sobic003G440300--Sobic002G291800 Sobic003G440300--Sobic001G112900 Sobic005G002400 Sobic005G002400 Sobic003G440300--Sobic005G002400 Sobic003G440300--Sobic006G154800 Sobic004G323400 Sobic004G323400 Sobic003G440300--Sobic004G323400 Sobic001G112900--Sobic003G339200 Sobic004G344600 Sobic004G344600 Sobic001G112900--Sobic004G344600 Sobic003G304300 Sobic003G304300 Sobic001G112900--Sobic003G304300 Sobic002G161400 Sobic002G161400 Sobic001G112900--Sobic002G161400 Sobic010G113200 Sobic010G113200 Sobic001G112900--Sobic010G113200 Sobic001G112900--Sobic005G002400 Sobic006G191500 Sobic006G191500 Sobic001G112900--Sobic006G191500 Sobic001G112900--Sobic003G162400 Sobic010G104700 Sobic010G104700 Sobic001G112900--Sobic010G104700 Sobic003G139500 Sobic003G139500 Sobic009G016000--Sobic003G139500 Sobic009G246300 Sobic009G246300 Sobic009G016000--Sobic009G246300 Sobic009G016000--Sobic010G183600 Sobic008G180800 Sobic008G180800 Sobic009G016000--Sobic008G180800 Sobic001G043000 Sobic001G043000 Sobic009G016000--Sobic001G043000 Sobic009G016000--Sobic007G121300 Sobic003G428600 Sobic003G428600 Sobic009G016000--Sobic003G428600 Sobic001G331600 Sobic001G331600 Sobic009G016000--Sobic001G331600 Sobic009G016000--Sobic010G104700 Sobic001G313000--Sobic001G112900 Sobic001G104900 Sobic001G104900 Sobic001G313000--Sobic001G104900 Sobic001G313000--Sobic003G339200 Sobic001G313000--Sobic004G344600 Sobic001G313000--Sobic007G121300 Sobic001G313000--Sobic003G304300 Sobic003G340300 Sobic003G340300 Sobic001G313000--Sobic003G340300 Sobic001G313000--Sobic003G188200 Sobic001G313000--Sobic010G183600 Sobic006G150800--Sobic010G183600 Sobic002G052100 Sobic002G052100 Sobic006G150800--Sobic002G052100 Sobic006G150800--Sobic005G176100 Sobic001G181100 Sobic001G181100 Sobic006G150800--Sobic001G181100 Sobic010G271800 Sobic010G271800 Sobic006G150800--Sobic010G271800 Sobic004G214800 Sobic004G214800 Sobic006G150800--Sobic004G214800 Sobic006G150800--Sobic006G154800 Sobic006G150800--Sobic003G326000 Sobic002G052000 Sobic002G052000 Sobic006G150800--Sobic002G052000 Sobic005G176100--Sobic001G112900 Sobic005G176100--Sobic003G339200 Sobic005G176100--Sobic004G344600 Sobic005G176100--Sobic002G052100 Sobic005G176100--Sobic003G162400 Sobic005G176100--Sobic001G181100 Sobic004G282900 Sobic004G282900 Sobic005G176100--Sobic004G282900 Sobic005G176100--Sobic004G214800 Sobic005G176100--Sobic010G183600 Sobic003G339200--Sobic001G112900 Sobic003G339200--Sobic004G344600 Sobic003G339200--Sobic002G161400 Sobic003G339200--Sobic003G304300 Sobic003G339200--Sobic010G113200 Sobic009G246400 Sobic009G246400 Sobic003G339200--Sobic009G246400 Sobic003G339200--Sobic003G162400 Sobic003G339200--Sobic006G191500 Sobic003G339200--Sobic010G104700 Sobic006G154800--Sobic003G326000 Sobic006G154800--Sobic010G271800 Sobic006G154800--Sobic004G190100 Sobic006G154800--Sobic005G002400 Sobic006G154800--Sobic003G440300 Sobic008G002400 Sobic008G002400 Sobic006G154800--Sobic008G002400 Sobic006G154800--Sobic001G112900 Sobic004G217500 Sobic004G217500 Sobic006G154800--Sobic004G217500 Sobic006G154800--Sobic010G113200 Sobic004G128900 Sobic004G128900 Sobic007G121300--Sobic004G128900 Sobic007G121300--Sobic002G161400 Sobic007G121300--Sobic004G344600 Sobic007G121300--Sobic001G331600 Sobic007G121300--Sobic003G340300 Sobic009G259100 Sobic009G259100 Sobic007G121300--Sobic009G259100 Sobic007G121300--Sobic006G191500 Sobic001G485100 Sobic001G485100 Sobic007G121300--Sobic001G485100 Sobic004G035100 Sobic004G035100 Sobic007G121300--Sobic004G035100
Octagon: transcription factors


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