Gene annotation
Transcriptome id Sobic.004G047300.1
Synonym Sb04g004040
Functional annotation receptor-like protein kinase precursor, putative, expressed
UniProt C5XVD0
Pfam PF08263 PF00560 PF07714 PF13855
Panther DB PTHR27000 PTHR27000:SF22
NCBI CDD KOG0472; Leucine-rich repeat protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G47570 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os02g12400.1 : receptor-like protein kinase precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS6B02G008900 , TraesCS6D02G002200
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G291800 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
2 Sobic.001G112900 expressed protein -
3 Sobic.008G002400 expressed protein -
4 Sobic.003G162400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.010G223200 OsFtsH2 FtsH protease, homologue of AtFtsH2/8, expressed K03798: ftsH, cell division protease FtsH
6 Sobic.004G217500 receptor-like protein kinase 5 precursor, putative, expressed -
7 Sobic.005G002400 expressed protein -
8 Sobic.010G113200 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed -
9 Sobic.002G293500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sialin, putative, expressed -
10 Sobic.006G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
11 Sobic.002G161400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
12 Sobic.002G275100 response regulator receiver domain containing protein, expressed K12130: pseudo-response regulator 5
13 Sobic.003G339200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.003G428600 amidohydrolase, putative, expressed K07047: N-substituted formamide deformylase
15 Sobic.003G080100 Ser/Thr protein kinase, putative, expressed -
16 Sobic.003G304300 expressed protein -
17 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
18 Sobic.006G154800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.009G225600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
20 Sobic.003G326000 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -


Gene co-expression network
sample Sobic004G047300 Sobic004G047300 Sobic002G291800 Sobic002G291800 Sobic004G047300--Sobic002G291800 Sobic001G112900 Sobic001G112900 Sobic004G047300--Sobic001G112900 Sobic008G002400 Sobic008G002400 Sobic004G047300--Sobic008G002400 Sobic003G162400 Sobic003G162400 Sobic004G047300--Sobic003G162400 Sobic010G223200 Sobic010G223200 Sobic004G047300--Sobic010G223200 Sobic004G217500 Sobic004G217500 Sobic004G047300--Sobic004G217500 Sobic005G002400 Sobic005G002400 Sobic004G047300--Sobic005G002400 Sobic010G113200 Sobic010G113200 Sobic004G047300--Sobic010G113200 Sobic002G293500 Sobic002G293500 Sobic004G047300--Sobic002G293500 Sobic002G291800--Sobic010G223200 Sobic008G167600 Sobic008G167600 Sobic002G291800--Sobic008G167600 Sobic002G291800--Sobic003G162400 Sobic006G235300 Sobic006G235300 Sobic002G291800--Sobic006G235300 Sobic003G440300 Sobic003G440300 Sobic002G291800--Sobic003G440300 Sobic004G127800 Sobic004G127800 Sobic002G291800--Sobic004G127800 Sobic004G190100 Sobic004G190100 Sobic002G291800--Sobic004G190100 Sobic002G275100 Sobic002G275100 Sobic002G291800--Sobic002G275100 Sobic002G291800--Sobic001G112900 Sobic003G339200 Sobic003G339200 Sobic001G112900--Sobic003G339200 Sobic004G344600 Sobic004G344600 Sobic001G112900--Sobic004G344600 Sobic003G304300 Sobic003G304300 Sobic001G112900--Sobic003G304300 Sobic002G161400 Sobic002G161400 Sobic001G112900--Sobic002G161400 Sobic001G112900--Sobic010G113200 Sobic001G112900--Sobic005G002400 Sobic006G191500 Sobic006G191500 Sobic001G112900--Sobic006G191500 Sobic001G112900--Sobic003G162400 Sobic010G104700 Sobic010G104700 Sobic001G112900--Sobic010G104700 Sobic008G002400--Sobic005G002400 Sobic003G326000 Sobic003G326000 Sobic008G002400--Sobic003G326000 Sobic001G181100 Sobic001G181100 Sobic008G002400--Sobic001G181100 Sobic010G271800 Sobic010G271800 Sobic008G002400--Sobic010G271800 Sobic006G020300 Sobic006G020300 Sobic008G002400--Sobic006G020300 Sobic008G002400--Sobic001G112900 Sobic007G016600 Sobic007G016600 Sobic008G002400--Sobic007G016600 Sobic008G002400--Sobic004G190100 Sobic008G002400--Sobic010G113200 Sobic003G162400--Sobic001G112900 Sobic003G162400--Sobic003G339200 Sobic003G162400--Sobic004G344600 Sobic003G162400--Sobic005G002400 Sobic003G162400--Sobic010G113200 Sobic003G162400--Sobic002G161400 Sobic003G162400--Sobic003G326000 Sobic003G162400--Sobic003G440300 Sobic003G162400--Sobic003G304300 Sobic002G060800 Sobic002G060800 Sobic010G223200--Sobic002G060800 Sobic010G223200--Sobic002G291800 Sobic007G006200 Sobic007G006200 Sobic010G223200--Sobic007G006200 Sobic002G351200 Sobic002G351200 Sobic010G223200--Sobic002G351200 Sobic004G271600 Sobic004G271600 Sobic010G223200--Sobic004G271600 Sobic004G317700 Sobic004G317700 Sobic010G223200--Sobic004G317700 Sobic010G223200--Sobic002G275100 Sobic010G207100 Sobic010G207100 Sobic010G223200--Sobic010G207100 Sobic002G132400 Sobic002G132400 Sobic010G223200--Sobic002G132400 Sobic003G080100 Sobic003G080100 Sobic004G217500--Sobic003G080100 Sobic006G154800 Sobic006G154800 Sobic004G217500--Sobic006G154800 Sobic005G065000 Sobic005G065000 Sobic004G217500--Sobic005G065000 Sobic004G217500--Sobic010G113200 Sobic004G217500--Sobic010G104700 Sobic004G217500--Sobic004G047300 Sobic004G153900 Sobic004G153900 Sobic004G217500--Sobic004G153900 Sobic003G012400 Sobic003G012400 Sobic004G217500--Sobic003G012400 Sobic006G120301 Sobic006G120301 Sobic004G217500--Sobic006G120301 Sobic005G002400--Sobic008G002400 Sobic005G002400--Sobic003G326000 Sobic005G002400--Sobic001G112900 Sobic005G002400--Sobic001G181100 Sobic002G052100 Sobic002G052100 Sobic005G002400--Sobic002G052100 Sobic005G002400--Sobic004G190100 Sobic005G002400--Sobic010G271800 Sobic005G002400--Sobic006G020300 Sobic003G154400 Sobic003G154400 Sobic005G002400--Sobic003G154400 Sobic010G113200--Sobic001G112900 Sobic010G113200--Sobic003G339200 Sobic010G113200--Sobic003G304300 Sobic009G246400 Sobic009G246400 Sobic010G113200--Sobic009G246400 Sobic010G113200--Sobic005G002400 Sobic010G113200--Sobic002G161400 Sobic010G113200--Sobic002G351200 Sobic010G113200--Sobic004G344600 Sobic010G113200--Sobic003G162400 Sobic002G293500--Sobic004G153900 Sobic001G046000 Sobic001G046000 Sobic002G293500--Sobic001G046000 Sobic002G293500--Sobic002G161400 Sobic001G331600 Sobic001G331600 Sobic002G293500--Sobic001G331600 Sobic004G312600 Sobic004G312600 Sobic002G293500--Sobic004G312600 Sobic002G293500--Sobic004G127800 Sobic007G227100 Sobic007G227100 Sobic002G293500--Sobic007G227100 Sobic010G131700 Sobic010G131700 Sobic002G293500--Sobic010G131700 Sobic001G485100 Sobic001G485100 Sobic002G293500--Sobic001G485100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.