Gene annotation
Transcriptome id Sobic.004G217500.1
Synonym EFR, Sb04g026260
Functional annotation receptor-like protein kinase 5 precursor, putative, expressed
UniProt A0A1Z5RPF3
Pfam PF00560 PF08263 PF00069 PF13855
Panther DB PTHR27000 PTHR27000:SF82
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G47570 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os02g40180.1 : receptor-like protein kinase 5 precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU6Hr1G008930.4 , HORVU6Hr1G008930.1 , HORVU6Hr1G008930.3
Wheat TraesCS6D02G205900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G080100 Ser/Thr protein kinase, putative, expressed -
2 Sobic.006G154800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.005G065000 Leucine-Rich Repeat Receptor Kinase(PubMedID : 21442410)@expressed protein -
4 Sobic.010G113200 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed -
5 Sobic.010G104700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
6 Sobic.004G047300 receptor-like protein kinase precursor, putative, expressed -
7 Sobic.004G153900 terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
8 Sobic.003G012400 flavin monooxygenase, putative, expressed -
9 Sobic.006G120301 - -
10 Sobic.002G291800 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
11 Sobic.003G162400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.003G326000 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
13 Sobic.001G112900 expressed protein -
14 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
15 Sobic.003G428600 amidohydrolase, putative, expressed K07047: N-substituted formamide deformylase
16 Sobic.003G339200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.002G161400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
18 Sobic.001G492600 VQ domain containing protein, putative, expressed -
19 Sobic.003G304300 expressed protein -
20 Sobic.004G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CPuORF19 - conserved peptide uORF-containing transcript, expressed -


Gene co-expression network
sample Sobic004G217500 Sobic004G217500 Sobic003G080100 Sobic003G080100 Sobic004G217500--Sobic003G080100 Sobic006G154800 Sobic006G154800 Sobic004G217500--Sobic006G154800 Sobic005G065000 Sobic005G065000 Sobic004G217500--Sobic005G065000 Sobic010G113200 Sobic010G113200 Sobic004G217500--Sobic010G113200 Sobic010G104700 Sobic010G104700 Sobic004G217500--Sobic010G104700 Sobic004G047300 Sobic004G047300 Sobic004G217500--Sobic004G047300 Sobic004G153900 Sobic004G153900 Sobic004G217500--Sobic004G153900 Sobic003G012400 Sobic003G012400 Sobic004G217500--Sobic003G012400 Sobic006G120301 Sobic006G120301 Sobic004G217500--Sobic006G120301 Sobic003G080100--Sobic004G217500 Sobic001G492600 Sobic001G492600 Sobic003G080100--Sobic001G492600 Sobic003G080100--Sobic006G120301 Sobic002G351200 Sobic002G351200 Sobic003G080100--Sobic002G351200 Sobic003G080100--Sobic003G012400 Sobic002G132400 Sobic002G132400 Sobic003G080100--Sobic002G132400 Sobic002G213400 Sobic002G213400 Sobic003G080100--Sobic002G213400 Sobic003G080100--Sobic004G153900 Sobic004G271600 Sobic004G271600 Sobic003G080100--Sobic004G271600 Sobic003G326000 Sobic003G326000 Sobic006G154800--Sobic003G326000 Sobic010G271800 Sobic010G271800 Sobic006G154800--Sobic010G271800 Sobic004G190100 Sobic004G190100 Sobic006G154800--Sobic004G190100 Sobic005G002400 Sobic005G002400 Sobic006G154800--Sobic005G002400 Sobic003G440300 Sobic003G440300 Sobic006G154800--Sobic003G440300 Sobic008G002400 Sobic008G002400 Sobic006G154800--Sobic008G002400 Sobic001G112900 Sobic001G112900 Sobic006G154800--Sobic001G112900 Sobic006G154800--Sobic004G217500 Sobic006G154800--Sobic010G113200 Sobic005G065000--Sobic004G217500 Sobic001G200000 Sobic001G200000 Sobic005G065000--Sobic001G200000 Sobic005G065000--Sobic003G080100 Sobic010G100300 Sobic010G100300 Sobic005G065000--Sobic010G100300 Sobic005G065000--Sobic003G012400 Sobic005G065000--Sobic010G104700 Sobic005G065000--Sobic004G153900 Sobic003G428600 Sobic003G428600 Sobic005G065000--Sobic003G428600 Sobic004G035900 Sobic004G035900 Sobic005G065000--Sobic004G035900 Sobic010G113200--Sobic001G112900 Sobic003G339200 Sobic003G339200 Sobic010G113200--Sobic003G339200 Sobic003G304300 Sobic003G304300 Sobic010G113200--Sobic003G304300 Sobic009G246400 Sobic009G246400 Sobic010G113200--Sobic009G246400 Sobic010G113200--Sobic005G002400 Sobic002G161400 Sobic002G161400 Sobic010G113200--Sobic002G161400 Sobic010G113200--Sobic002G351200 Sobic004G344600 Sobic004G344600 Sobic010G113200--Sobic004G344600 Sobic003G162400 Sobic003G162400 Sobic010G113200--Sobic003G162400 Sobic001G046000 Sobic001G046000 Sobic010G104700--Sobic001G046000 Sobic010G104700--Sobic003G304300 Sobic010G101000 Sobic010G101000 Sobic010G104700--Sobic010G101000 Sobic010G104700--Sobic004G344600 Sobic010G104700--Sobic004G153900 Sobic009G225600 Sobic009G225600 Sobic010G104700--Sobic009G225600 Sobic010G104700--Sobic002G161400 Sobic008G180800 Sobic008G180800 Sobic010G104700--Sobic008G180800 Sobic010G104700--Sobic002G351200 Sobic002G291800 Sobic002G291800 Sobic004G047300--Sobic002G291800 Sobic004G047300--Sobic001G112900 Sobic004G047300--Sobic008G002400 Sobic004G047300--Sobic003G162400 Sobic010G223200 Sobic010G223200 Sobic004G047300--Sobic010G223200 Sobic004G047300--Sobic004G217500 Sobic004G047300--Sobic005G002400 Sobic004G047300--Sobic010G113200 Sobic002G293500 Sobic002G293500 Sobic004G047300--Sobic002G293500 Sobic004G128900 Sobic004G128900 Sobic004G153900--Sobic004G128900 Sobic004G153900--Sobic002G161400 Sobic004G153900--Sobic010G104700 Sobic004G153900--Sobic001G046000 Sobic001G331600 Sobic001G331600 Sobic004G153900--Sobic001G331600 Sobic006G191500 Sobic006G191500 Sobic004G153900--Sobic006G191500 Sobic001G485100 Sobic001G485100 Sobic004G153900--Sobic001G485100 Sobic008G149100 Sobic008G149100 Sobic004G153900--Sobic008G149100 Sobic004G153900--Sobic004G344600 Sobic003G012400--Sobic004G128900 Sobic003G012400--Sobic004G153900 Sobic003G012400--Sobic002G161400 Sobic006G161500 Sobic006G161500 Sobic003G012400--Sobic006G161500 Sobic001G263100 Sobic001G263100 Sobic003G012400--Sobic001G263100 Sobic004G035100 Sobic004G035100 Sobic003G012400--Sobic004G035100 Sobic006G235400 Sobic006G235400 Sobic003G012400--Sobic006G235400 Sobic003G012400--Sobic009G246400 Sobic003G012400--Sobic001G331600 Sobic006G120301--Sobic003G080100 Sobic006G120301--Sobic002G213400 Sobic006G120301--Sobic010G113200 Sobic006G120301--Sobic001G492600 Sobic006G120301--Sobic002G351200 Sobic003G426900 Sobic003G426900 Sobic006G120301--Sobic003G426900 Sobic006G120301--Sobic004G217500 Sobic001G434000 Sobic001G434000 Sobic006G120301--Sobic001G434000 Sobic010G100900 Sobic010G100900 Sobic006G120301--Sobic010G100900
Octagon: transcription factors


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