Gene annotation
Transcriptome id Sobic.006G120301.1
Synonym -
Functional annotation -
UniProt A0A1Z5REC0
Pfam PF02365
Panther DB PTHR31079 PTHR31079:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT5G14490 : NAC domain containing protein 85
RAP-DB (Rice) LOC_Os02g38130.1 : no apical meristem protein, putative, expressed
MaizeGDB (Corn) Zm00025a010990
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G080100 Ser/Thr protein kinase, putative, expressed -
2 Sobic.002G213400 expressed protein -
3 Sobic.010G113200 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed -
4 Sobic.001G492600 VQ domain containing protein, putative, expressed -
5 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
6 Sobic.003G426900 proline synthetase co-transcribed bacterial homolog protein, putative, expressed K06997: yggS, PLP dependent protein
7 Sobic.004G217500 receptor-like protein kinase 5 precursor, putative, expressed -
8 Sobic.001G434000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.010G100900 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase
10 Sobic.001G018000 amine oxidase, flavin-containing, domain containing protein, expressed -
11 Sobic.008G002400 expressed protein -
12 Sobic.003G304300 expressed protein -
13 Sobic.003G162400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.001G122900 expressed protein -
15 Sobic.009G246400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyprenyl synthetase, putative, expressed K05356: SPS, all-trans-nonaprenyl-diphosphate synthase
16 Sobic.010G104700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
17 Sobic.009G245000 Glucose-1-phosphate adenylyltransferase large subunit(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed K00975: glucose-1-phosphate adenylyltransferase
18 Sobic.001G112900 expressed protein -
19 Sobic.005G002400 expressed protein -
20 Sobic.003G012400 flavin monooxygenase, putative, expressed -


Gene co-expression network
sample Sobic006G120301 Sobic006G120301 Sobic003G080100 Sobic003G080100 Sobic006G120301--Sobic003G080100 Sobic002G213400 Sobic002G213400 Sobic006G120301--Sobic002G213400 Sobic010G113200 Sobic010G113200 Sobic006G120301--Sobic010G113200 Sobic001G492600 Sobic001G492600 Sobic006G120301--Sobic001G492600 Sobic002G351200 Sobic002G351200 Sobic006G120301--Sobic002G351200 Sobic003G426900 Sobic003G426900 Sobic006G120301--Sobic003G426900 Sobic004G217500 Sobic004G217500 Sobic006G120301--Sobic004G217500 Sobic001G434000 Sobic001G434000 Sobic006G120301--Sobic001G434000 Sobic010G100900 Sobic010G100900 Sobic006G120301--Sobic010G100900 Sobic003G080100--Sobic004G217500 Sobic003G080100--Sobic001G492600 Sobic003G080100--Sobic006G120301 Sobic003G080100--Sobic002G351200 Sobic003G012400 Sobic003G012400 Sobic003G080100--Sobic003G012400 Sobic002G132400 Sobic002G132400 Sobic003G080100--Sobic002G132400 Sobic003G080100--Sobic002G213400 Sobic004G153900 Sobic004G153900 Sobic003G080100--Sobic004G153900 Sobic004G271600 Sobic004G271600 Sobic003G080100--Sobic004G271600 Sobic002G213400--Sobic002G351200 Sobic010G207100 Sobic010G207100 Sobic002G213400--Sobic010G207100 Sobic001G018000 Sobic001G018000 Sobic002G213400--Sobic001G018000 Sobic007G016600 Sobic007G016600 Sobic002G213400--Sobic007G016600 Sobic002G213400--Sobic001G434000 Sobic002G213400--Sobic010G100900 Sobic004G268400 Sobic004G268400 Sobic002G213400--Sobic004G268400 Sobic007G124500 Sobic007G124500 Sobic002G213400--Sobic007G124500 Sobic003G304300 Sobic003G304300 Sobic002G213400--Sobic003G304300 Sobic001G112900 Sobic001G112900 Sobic010G113200--Sobic001G112900 Sobic003G339200 Sobic003G339200 Sobic010G113200--Sobic003G339200 Sobic010G113200--Sobic003G304300 Sobic009G246400 Sobic009G246400 Sobic010G113200--Sobic009G246400 Sobic005G002400 Sobic005G002400 Sobic010G113200--Sobic005G002400 Sobic002G161400 Sobic002G161400 Sobic010G113200--Sobic002G161400 Sobic010G113200--Sobic002G351200 Sobic004G344600 Sobic004G344600 Sobic010G113200--Sobic004G344600 Sobic003G162400 Sobic003G162400 Sobic010G113200--Sobic003G162400 Sobic001G492600--Sobic003G080100 Sobic006G036300 Sobic006G036300 Sobic001G492600--Sobic006G036300 Sobic001G492600--Sobic004G271600 Sobic001G492600--Sobic003G012400 Sobic001G492600--Sobic002G132400 Sobic001G492600--Sobic006G120301 Sobic001G492600--Sobic002G213400 Sobic001G492600--Sobic002G351200 Sobic005G093800 Sobic005G093800 Sobic001G492600--Sobic005G093800 Sobic002G351200--Sobic010G100900 Sobic002G351200--Sobic001G018000 Sobic002G351200--Sobic003G304300 Sobic002G351200--Sobic004G268400 Sobic004G267700 Sobic004G267700 Sobic002G351200--Sobic004G267700 Sobic010G101000 Sobic010G101000 Sobic002G351200--Sobic010G101000 Sobic002G351200--Sobic002G132400 Sobic003G186800 Sobic003G186800 Sobic002G351200--Sobic003G186800 Sobic002G351200--Sobic002G213400 Sobic003G428600 Sobic003G428600 Sobic003G426900--Sobic003G428600 Sobic003G426900--Sobic002G351200 Sobic003G426900--Sobic002G213400 Sobic003G426900--Sobic001G018000 Sobic007G010800 Sobic007G010800 Sobic003G426900--Sobic007G010800 Sobic003G426900--Sobic010G101000 Sobic003G426900--Sobic001G112900 Sobic003G426900--Sobic010G113200 Sobic003G426900--Sobic003G304300 Sobic004G217500--Sobic003G080100 Sobic006G154800 Sobic006G154800 Sobic004G217500--Sobic006G154800 Sobic005G065000 Sobic005G065000 Sobic004G217500--Sobic005G065000 Sobic004G217500--Sobic010G113200 Sobic010G104700 Sobic010G104700 Sobic004G217500--Sobic010G104700 Sobic004G047300 Sobic004G047300 Sobic004G217500--Sobic004G047300 Sobic004G217500--Sobic004G153900 Sobic004G217500--Sobic003G012400 Sobic004G217500--Sobic006G120301 Sobic001G434000--Sobic002G351200 Sobic006G020300 Sobic006G020300 Sobic001G434000--Sobic006G020300 Sobic001G434000--Sobic001G018000 Sobic002G030900 Sobic002G030900 Sobic001G434000--Sobic002G030900 Sobic001G434000--Sobic002G213400 Sobic001G434000--Sobic010G101000 Sobic001G434000--Sobic010G104700 Sobic001G434000--Sobic004G267700 Sobic001G411100 Sobic001G411100 Sobic001G434000--Sobic001G411100 Sobic010G100900--Sobic002G351200 Sobic003G380200 Sobic003G380200 Sobic010G100900--Sobic003G380200 Sobic010G100900--Sobic002G132400 Sobic010G100900--Sobic004G268400 Sobic010G100900--Sobic003G304300 Sobic010G100900--Sobic004G267700 Sobic010G100900--Sobic004G271600 Sobic002G356900 Sobic002G356900 Sobic010G100900--Sobic002G356900 Sobic004G128900 Sobic004G128900 Sobic010G100900--Sobic004G128900
Octagon: transcription factors


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