Gene annotation
Transcriptome id Sobic.001G122900.1,Sobic.001G122900.3,Sobic.001G122900.2
Synonym Sb01g010810
Functional annotation expressed protein
UniProt A0A1B6QIL4 , A0A1B6QIL2 , C5WNS7
Pfam -
Panther DB PTHR18959
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g49630.1 : expressed protein
MaizeGDB (Corn) Zm00025a007762
Brachypodium -
Barley HORVU4Hr1G006670.3 , HORVU4Hr1G006670.2 , HORVU4Hr1G006670.1
Wheat -
Populus -


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cDNA sequences
Sobic.001G122900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G239000 "FLO2(Ortholog in rice:She et al., 2010)"(PubMedID : 31659901)@tetratricopeptide repeat domain containing protein, putative, expressed K03255: TIF31, protein TIF31
2 Sobic.001G331600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATP-dependent protease, putative, expressed -
3 Sobic.001G485100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.003G380200 SNARE associated Golgi protein, putative, expressed -
5 Sobic.006G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
6 Sobic.003G186800 transporter, major facilitator family, putative, expressed -
7 Sobic.002G161400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
8 Sobic.009G225600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
9 Sobic.004G128900 GTP-binding protein typA/bipA, putative, expressed K06207: typA, GTP-binding protein
10 Sobic.009G259100 CCT motif family protein, expressed -
11 Sobic.001G046000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.006G213700 oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed K13237: peroxisomal 2,4-dienoyl-CoA reductase
13 Sobic.010G100900 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase
14 Sobic.003G304300 expressed protein -
15 Sobic.003G003450 - K01177: beta-amylase
16 Sobic.007G121300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@cleavage and polyadenylation specificity factor subunit 5, putative, expressed K14397: NUDT21, CPSF5, cleavage and polyadenylation specificity factor subunit 5
17 Sobic.007G227100 expressed protein -
18 Sobic.004G344600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
19 Sobic.003G409700 rieske domain containing protein, expressed -
20 Sobic.004G127800 AGC_PKA/PKG_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -


Gene co-expression network
sample Sobic001G122900 Sobic001G122900 Sobic006G239000 Sobic006G239000 Sobic001G122900--Sobic006G239000 Sobic001G331600 Sobic001G331600 Sobic001G122900--Sobic001G331600 Sobic001G485100 Sobic001G485100 Sobic001G122900--Sobic001G485100 Sobic003G380200 Sobic003G380200 Sobic001G122900--Sobic003G380200 Sobic006G191500 Sobic006G191500 Sobic001G122900--Sobic006G191500 Sobic003G186800 Sobic003G186800 Sobic001G122900--Sobic003G186800 Sobic002G161400 Sobic002G161400 Sobic001G122900--Sobic002G161400 Sobic009G225600 Sobic009G225600 Sobic001G122900--Sobic009G225600 Sobic004G128900 Sobic004G128900 Sobic001G122900--Sobic004G128900 Sobic006G239000--Sobic001G122900 Sobic007G227100 Sobic007G227100 Sobic006G239000--Sobic007G227100 Sobic006G239000--Sobic001G331600 Sobic004G312600 Sobic004G312600 Sobic006G239000--Sobic004G312600 Sobic003G003450 Sobic003G003450 Sobic006G239000--Sobic003G003450 Sobic003G271400 Sobic003G271400 Sobic006G239000--Sobic003G271400 Sobic001G378100 Sobic001G378100 Sobic006G239000--Sobic001G378100 Sobic004G328000 Sobic004G328000 Sobic006G239000--Sobic004G328000 Sobic004G035900 Sobic004G035900 Sobic006G239000--Sobic004G035900 Sobic001G331600--Sobic001G485100 Sobic001G331600--Sobic004G128900 Sobic004G153900 Sobic004G153900 Sobic001G331600--Sobic004G153900 Sobic001G331600--Sobic002G161400 Sobic001G046000 Sobic001G046000 Sobic001G331600--Sobic001G046000 Sobic001G331600--Sobic004G312600 Sobic001G331600--Sobic007G227100 Sobic001G331600--Sobic006G191500 Sobic004G344600 Sobic004G344600 Sobic001G331600--Sobic004G344600 Sobic001G485100--Sobic006G191500 Sobic001G485100--Sobic002G161400 Sobic001G485100--Sobic003G380200 Sobic001G485100--Sobic003G186800 Sobic001G485100--Sobic001G046000 Sobic001G485100--Sobic001G331600 Sobic003G228300 Sobic003G228300 Sobic001G485100--Sobic003G228300 Sobic001G485100--Sobic009G225600 Sobic001G485100--Sobic004G344600 Sobic003G380200--Sobic006G191500 Sobic003G380200--Sobic003G186800 Sobic010G100900 Sobic010G100900 Sobic003G380200--Sobic010G100900 Sobic003G304300 Sobic003G304300 Sobic003G380200--Sobic003G304300 Sobic004G267700 Sobic004G267700 Sobic003G380200--Sobic004G267700 Sobic003G380200--Sobic001G485100 Sobic007G087100 Sobic007G087100 Sobic003G380200--Sobic007G087100 Sobic003G380200--Sobic002G161400 Sobic004G268400 Sobic004G268400 Sobic003G380200--Sobic004G268400 Sobic006G191500--Sobic002G161400 Sobic006G191500--Sobic003G380200 Sobic006G191500--Sobic001G485100 Sobic006G191500--Sobic003G304300 Sobic006G191500--Sobic004G128900 Sobic006G191500--Sobic004G344600 Sobic006G191500--Sobic003G186800 Sobic006G191500--Sobic010G100900 Sobic006G191500--Sobic001G046000 Sobic003G186800--Sobic003G380200 Sobic003G186800--Sobic003G304300 Sobic003G186800--Sobic009G225600 Sobic003G186800--Sobic006G191500 Sobic003G186800--Sobic001G485100 Sobic010G101000 Sobic010G101000 Sobic003G186800--Sobic010G101000 Sobic003G186800--Sobic004G268400 Sobic002G047400 Sobic002G047400 Sobic003G186800--Sobic002G047400 Sobic003G186800--Sobic004G267700 Sobic002G161400--Sobic006G191500 Sobic002G161400--Sobic004G344600 Sobic002G161400--Sobic004G128900 Sobic002G161400--Sobic003G304300 Sobic002G161400--Sobic001G485100 Sobic002G161400--Sobic004G153900 Sobic003G339200 Sobic003G339200 Sobic002G161400--Sobic003G339200 Sobic002G161400--Sobic003G380200 Sobic001G112900 Sobic001G112900 Sobic002G161400--Sobic001G112900 Sobic009G225600--Sobic001G046000 Sobic009G225600--Sobic010G101000 Sobic009G225600--Sobic003G186800 Sobic009G225600--Sobic002G047400 Sobic009G225600--Sobic001G485100 Sobic010G104700 Sobic010G104700 Sobic009G225600--Sobic010G104700 Sobic002G351200 Sobic002G351200 Sobic009G225600--Sobic002G351200 Sobic001G015200 Sobic001G015200 Sobic009G225600--Sobic001G015200 Sobic009G225600--Sobic003G380200 Sobic004G128900--Sobic002G161400 Sobic004G128900--Sobic004G153900 Sobic004G128900--Sobic006G191500 Sobic006G235400 Sobic006G235400 Sobic004G128900--Sobic006G235400 Sobic006G161500 Sobic006G161500 Sobic004G128900--Sobic006G161500 Sobic004G128900--Sobic004G344600 Sobic004G128900--Sobic003G380200 Sobic004G128900--Sobic001G331600 Sobic004G128900--Sobic001G485100
Octagon: transcription factors


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