Gene annotation
Transcriptome id Sobic.001G492600.3,Sobic.001G492600.5,Sobic.001G492600.2,Sobic.001G492600.1,Sobic.001G492600.4
Synonym Sb01g046040, SIB1
Functional annotation VQ domain containing protein, putative, expressed
UniProt A0A1Z5SB74 , A0A1B6QQD2 , A0A1Z5SBN6
Pfam PF05678
Panther DB PTHR33624 PTHR33624:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G56710 : sigma factor binding protein 1
RAP-DB (Rice) LOC_Os05g32460.1 : VQ domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a037844 , Zm00025a000830
Brachypodium KQK05646 , KQJ81786 , PNT73059
Barley HORVU1Hr1G068280.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G080100 Ser/Thr protein kinase, putative, expressed -
2 Sobic.006G036300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@flowering promoting factor-like 1, putative, expressed -
3 Sobic.004G271600 region found in RelA/SpoT proteins containing protein, expressed -
4 Sobic.003G012400 flavin monooxygenase, putative, expressed -
5 Sobic.002G132400 -(PubMedID : 26465154)@expressed protein -
6 Sobic.006G120301 - -
7 Sobic.002G213400 expressed protein -
8 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
9 Sobic.005G093800 NB-ARC domain containing protein, expressed K13457: RPM1, disease resistance protein RPM1
10 Sobic.010G100900 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase
11 Sobic.002G291800 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
12 Sobic.004G217500 receptor-like protein kinase 5 precursor, putative, expressed -
13 Sobic.010G113200 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed -
14 Sobic.010G207100 methyltransferase domain containing protein, putative, expressed -
15 Sobic.002G408000 KIP1, putative, expressed -
16 Sobic.004G317800 - -
17 Sobic.002G072500 expressed protein -
18 Sobic.009G246400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyprenyl synthetase, putative, expressed K05356: SPS, all-trans-nonaprenyl-diphosphate synthase
19 Sobic.004G128900 GTP-binding protein typA/bipA, putative, expressed K06207: typA, GTP-binding protein
20 Sobic.002G275100 response regulator receiver domain containing protein, expressed K12130: pseudo-response regulator 5


Gene co-expression network
sample Sobic001G492600 Sobic001G492600 Sobic003G080100 Sobic003G080100 Sobic001G492600--Sobic003G080100 Sobic006G036300 Sobic006G036300 Sobic001G492600--Sobic006G036300 Sobic004G271600 Sobic004G271600 Sobic001G492600--Sobic004G271600 Sobic003G012400 Sobic003G012400 Sobic001G492600--Sobic003G012400 Sobic002G132400 Sobic002G132400 Sobic001G492600--Sobic002G132400 Sobic006G120301 Sobic006G120301 Sobic001G492600--Sobic006G120301 Sobic002G213400 Sobic002G213400 Sobic001G492600--Sobic002G213400 Sobic002G351200 Sobic002G351200 Sobic001G492600--Sobic002G351200 Sobic005G093800 Sobic005G093800 Sobic001G492600--Sobic005G093800 Sobic004G217500 Sobic004G217500 Sobic003G080100--Sobic004G217500 Sobic003G080100--Sobic001G492600 Sobic003G080100--Sobic006G120301 Sobic003G080100--Sobic002G351200 Sobic003G080100--Sobic003G012400 Sobic003G080100--Sobic002G132400 Sobic003G080100--Sobic002G213400 Sobic004G153900 Sobic004G153900 Sobic003G080100--Sobic004G153900 Sobic003G080100--Sobic004G271600 Sobic010G178000 Sobic010G178000 Sobic006G036300--Sobic010G178000 Sobic006G145700 Sobic006G145700 Sobic006G036300--Sobic006G145700 Sobic010G207100 Sobic010G207100 Sobic006G036300--Sobic010G207100 Sobic001G434000 Sobic001G434000 Sobic006G036300--Sobic001G434000 Sobic006G036300--Sobic002G132400 Sobic002G408000 Sobic002G408000 Sobic006G036300--Sobic002G408000 Sobic006G036300--Sobic001G492600 Sobic006G036300--Sobic004G271600 Sobic006G036300--Sobic002G351200 Sobic004G271600--Sobic002G132400 Sobic002G081400 Sobic002G081400 Sobic004G271600--Sobic002G081400 Sobic010G100900 Sobic010G100900 Sobic004G271600--Sobic010G100900 Sobic004G271600--Sobic002G351200 Sobic007G124500 Sobic007G124500 Sobic004G271600--Sobic007G124500 Sobic002G072500 Sobic002G072500 Sobic004G271600--Sobic002G072500 Sobic006G090100 Sobic006G090100 Sobic004G271600--Sobic006G090100 Sobic001G509200 Sobic001G509200 Sobic004G271600--Sobic001G509200 Sobic002G060800 Sobic002G060800 Sobic004G271600--Sobic002G060800 Sobic004G128900 Sobic004G128900 Sobic003G012400--Sobic004G128900 Sobic003G012400--Sobic004G153900 Sobic002G161400 Sobic002G161400 Sobic003G012400--Sobic002G161400 Sobic006G161500 Sobic006G161500 Sobic003G012400--Sobic006G161500 Sobic001G263100 Sobic001G263100 Sobic003G012400--Sobic001G263100 Sobic004G035100 Sobic004G035100 Sobic003G012400--Sobic004G035100 Sobic006G235400 Sobic006G235400 Sobic003G012400--Sobic006G235400 Sobic009G246400 Sobic009G246400 Sobic003G012400--Sobic009G246400 Sobic001G331600 Sobic001G331600 Sobic003G012400--Sobic001G331600 Sobic002G132400--Sobic004G271600 Sobic002G132400--Sobic010G100900 Sobic002G132400--Sobic002G351200 Sobic002G132400--Sobic001G509200 Sobic007G135800 Sobic007G135800 Sobic002G132400--Sobic007G135800 Sobic003G380200 Sobic003G380200 Sobic002G132400--Sobic003G380200 Sobic002G132400--Sobic007G124500 Sobic004G268400 Sobic004G268400 Sobic002G132400--Sobic004G268400 Sobic002G132400--Sobic002G408000 Sobic006G120301--Sobic003G080100 Sobic006G120301--Sobic002G213400 Sobic010G113200 Sobic010G113200 Sobic006G120301--Sobic010G113200 Sobic006G120301--Sobic001G492600 Sobic006G120301--Sobic002G351200 Sobic003G426900 Sobic003G426900 Sobic006G120301--Sobic003G426900 Sobic006G120301--Sobic004G217500 Sobic006G120301--Sobic001G434000 Sobic006G120301--Sobic010G100900 Sobic002G213400--Sobic002G351200 Sobic002G213400--Sobic010G207100 Sobic001G018000 Sobic001G018000 Sobic002G213400--Sobic001G018000 Sobic007G016600 Sobic007G016600 Sobic002G213400--Sobic007G016600 Sobic002G213400--Sobic001G434000 Sobic002G213400--Sobic010G100900 Sobic002G213400--Sobic004G268400 Sobic002G213400--Sobic007G124500 Sobic003G304300 Sobic003G304300 Sobic002G213400--Sobic003G304300 Sobic002G351200--Sobic010G100900 Sobic002G351200--Sobic001G018000 Sobic002G351200--Sobic003G304300 Sobic002G351200--Sobic004G268400 Sobic004G267700 Sobic004G267700 Sobic002G351200--Sobic004G267700 Sobic010G101000 Sobic010G101000 Sobic002G351200--Sobic010G101000 Sobic002G351200--Sobic002G132400 Sobic003G186800 Sobic003G186800 Sobic002G351200--Sobic003G186800 Sobic002G351200--Sobic002G213400 Sobic003G190100 Sobic003G190100 Sobic005G093800--Sobic003G190100 Sobic006G177900 Sobic006G177900 Sobic005G093800--Sobic006G177900 Sobic005G093800--Sobic004G271600 Sobic002G173100 Sobic002G173100 Sobic005G093800--Sobic002G173100 Sobic002G077400 Sobic002G077400 Sobic005G093800--Sobic002G077400 Sobic010G121200 Sobic010G121200 Sobic005G093800--Sobic010G121200 Sobic002G115050 Sobic002G115050 Sobic005G093800--Sobic002G115050 Sobic008G166550 Sobic008G166550 Sobic005G093800--Sobic008G166550 Sobic005G093800--Sobic001G492600
Octagon: transcription factors


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