Gene annotation
Transcriptome id Sobic.002G408000.2,Sobic.002G408000.5,Sobic.002G408000.3,Sobic.002G408000.1,Sobic.002G408000.4
Synonym Sb02g042180
Functional annotation KIP1, putative, expressed
UniProt A0A1B6QG42
Pfam PF07765
Panther DB PTHR32258
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G03470 : Kinase interacting (KIP1-like) family protein
RAP-DB (Rice) LOC_Os07g47090.1,LOC_Os07g47090.2 : KIP1, putative, expressed
MaizeGDB (Corn) Zm00025a015378
Brachypodium KQK14734 , KQK14735 , KQK14732 , KQK14733 , KQK14731 , PNT74590
Barley HORVU2Hr1G021090.2 , HORVU2Hr1G021090.3 , HORVU2Hr1G021090.1
Wheat TraesCS2A02G121100 , TraesCS2B02G142000 , TraesCS2D02G123200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G132400 -(PubMedID : 26465154)@expressed protein -
2 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
3 Sobic.010G100900 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase
4 Sobic.004G267700 hydrolase, alpha/beta fold family domain containing protein, expressed -
5 Sobic.006G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
6 Sobic.009G246400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyprenyl synthetase, putative, expressed K05356: SPS, all-trans-nonaprenyl-diphosphate synthase
7 Sobic.003G380200 SNARE associated Golgi protein, putative, expressed -
8 Sobic.003G304300 expressed protein -
9 Sobic.004G268400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
10 Sobic.004G271600 region found in RelA/SpoT proteins containing protein, expressed -
11 Sobic.002G060800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf45, putative, expressed -
12 Sobic.001G470300 - -
13 Sobic.004G128900 GTP-binding protein typA/bipA, putative, expressed K06207: typA, GTP-binding protein
14 Sobic.006G090100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K09919: uncharacterized protein
15 Sobic.006G213700 oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed K13237: peroxisomal 2,4-dienoyl-CoA reductase
16 Sobic.004G344600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
17 Sobic.009G250400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA polymerase sigma factor, putative, expressed K03093: RNA polymerase sigma factor
18 Sobic.002G161400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
19 Sobic.001G434000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.001G509200 "similar to 9,10-9',10' carotenoid cleavage dioxygenase 1"(PubMedID : 29862293)@carotenoid cleavage dioxygenase, putative, expressed K11159: carotenoid cleavage oxygenase


Gene co-expression network
sample Sobic002G408000 Sobic002G408000 Sobic002G132400 Sobic002G132400 Sobic002G408000--Sobic002G132400 Sobic002G351200 Sobic002G351200 Sobic002G408000--Sobic002G351200 Sobic010G100900 Sobic010G100900 Sobic002G408000--Sobic010G100900 Sobic004G267700 Sobic004G267700 Sobic002G408000--Sobic004G267700 Sobic006G191500 Sobic006G191500 Sobic002G408000--Sobic006G191500 Sobic009G246400 Sobic009G246400 Sobic002G408000--Sobic009G246400 Sobic003G380200 Sobic003G380200 Sobic002G408000--Sobic003G380200 Sobic003G304300 Sobic003G304300 Sobic002G408000--Sobic003G304300 Sobic004G268400 Sobic004G268400 Sobic002G408000--Sobic004G268400 Sobic004G271600 Sobic004G271600 Sobic002G132400--Sobic004G271600 Sobic002G132400--Sobic010G100900 Sobic002G132400--Sobic002G351200 Sobic001G509200 Sobic001G509200 Sobic002G132400--Sobic001G509200 Sobic007G135800 Sobic007G135800 Sobic002G132400--Sobic007G135800 Sobic002G132400--Sobic003G380200 Sobic007G124500 Sobic007G124500 Sobic002G132400--Sobic007G124500 Sobic002G132400--Sobic004G268400 Sobic002G132400--Sobic002G408000 Sobic002G351200--Sobic010G100900 Sobic001G018000 Sobic001G018000 Sobic002G351200--Sobic001G018000 Sobic002G351200--Sobic003G304300 Sobic002G351200--Sobic004G268400 Sobic002G351200--Sobic004G267700 Sobic010G101000 Sobic010G101000 Sobic002G351200--Sobic010G101000 Sobic002G351200--Sobic002G132400 Sobic003G186800 Sobic003G186800 Sobic002G351200--Sobic003G186800 Sobic002G213400 Sobic002G213400 Sobic002G351200--Sobic002G213400 Sobic010G100900--Sobic002G351200 Sobic010G100900--Sobic003G380200 Sobic010G100900--Sobic002G132400 Sobic010G100900--Sobic004G268400 Sobic010G100900--Sobic003G304300 Sobic010G100900--Sobic004G267700 Sobic010G100900--Sobic004G271600 Sobic002G356900 Sobic002G356900 Sobic010G100900--Sobic002G356900 Sobic004G128900 Sobic004G128900 Sobic010G100900--Sobic004G128900 Sobic004G267700--Sobic004G268400 Sobic004G267700--Sobic003G304300 Sobic004G267700--Sobic010G101000 Sobic007G016600 Sobic007G016600 Sobic004G267700--Sobic007G016600 Sobic004G267700--Sobic003G380200 Sobic004G267700--Sobic002G351200 Sobic004G267700--Sobic001G018000 Sobic004G267700--Sobic003G186800 Sobic004G267700--Sobic010G100900 Sobic002G161400 Sobic002G161400 Sobic006G191500--Sobic002G161400 Sobic006G191500--Sobic003G380200 Sobic001G485100 Sobic001G485100 Sobic006G191500--Sobic001G485100 Sobic006G191500--Sobic003G304300 Sobic006G191500--Sobic004G128900 Sobic004G344600 Sobic004G344600 Sobic006G191500--Sobic004G344600 Sobic006G191500--Sobic003G186800 Sobic006G191500--Sobic010G100900 Sobic001G046000 Sobic001G046000 Sobic006G191500--Sobic001G046000 Sobic009G246400--Sobic002G161400 Sobic009G246400--Sobic004G344600 Sobic009G246400--Sobic003G304300 Sobic003G339200 Sobic003G339200 Sobic009G246400--Sobic003G339200 Sobic009G246400--Sobic004G128900 Sobic001G112900 Sobic001G112900 Sobic009G246400--Sobic001G112900 Sobic009G246400--Sobic006G191500 Sobic010G113200 Sobic010G113200 Sobic009G246400--Sobic010G113200 Sobic009G246400--Sobic010G100900 Sobic003G380200--Sobic006G191500 Sobic003G380200--Sobic003G186800 Sobic003G380200--Sobic010G100900 Sobic003G380200--Sobic003G304300 Sobic003G380200--Sobic004G267700 Sobic003G380200--Sobic001G485100 Sobic007G087100 Sobic007G087100 Sobic003G380200--Sobic007G087100 Sobic003G380200--Sobic002G161400 Sobic003G380200--Sobic004G268400 Sobic003G304300--Sobic004G267700 Sobic003G304300--Sobic006G191500 Sobic003G304300--Sobic002G351200 Sobic003G304300--Sobic002G161400 Sobic003G304300--Sobic004G344600 Sobic003G304300--Sobic001G112900 Sobic003G304300--Sobic003G186800 Sobic003G304300--Sobic003G380200 Sobic003G304300--Sobic004G268400 Sobic004G268400--Sobic004G267700 Sobic004G268400--Sobic007G016600 Sobic004G268400--Sobic001G018000 Sobic004G268400--Sobic002G351200 Sobic004G268400--Sobic003G304300 Sobic004G268400--Sobic003G186800 Sobic004G268400--Sobic010G100900 Sobic004G268400--Sobic010G101000 Sobic004G268400--Sobic003G380200
Octagon: transcription factors


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