Gene annotation
Transcriptome id Sobic.001G470300.1
Synonym
Functional annotation -
UniProt A0A1B6QPX1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G090100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K09919: uncharacterized protein
2 Sobic.001G180200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
3 Sobic.002G060800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf45, putative, expressed -
4 Sobic.004G271600 region found in RelA/SpoT proteins containing protein, expressed -
5 Sobic.002G132400 -(PubMedID : 26465154)@expressed protein -
6 Sobic.009G073900 thioredoxin, putative, expressed -
7 Sobic.006G235400 ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
8 Sobic.010G100900 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase
9 Sobic.009G038701 - -
10 Sobic.004G128900 GTP-binding protein typA/bipA, putative, expressed K06207: typA, GTP-binding protein
11 Sobic.002G408000 KIP1, putative, expressed -
12 Sobic.001G077300 thioredoxin, putative, expressed -
13 Sobic.009G250400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA polymerase sigma factor, putative, expressed K03093: RNA polymerase sigma factor
14 Sobic.006G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
15 Sobic.003G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.003G380200 SNARE associated Golgi protein, putative, expressed -
17 Sobic.007G135800 ATP-dependent Clp protease adaptor protein ClpS containing protein, expressed K06891: ATP-dependent Clp protease adaptor protein ClpS
18 Sobic.001G263100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
19 Sobic.003G073800 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
20 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -


Gene co-expression network
sample Sobic001G470300 Sobic001G470300 Sobic006G090100 Sobic006G090100 Sobic001G470300--Sobic006G090100 Sobic001G180200 Sobic001G180200 Sobic001G470300--Sobic001G180200 Sobic002G060800 Sobic002G060800 Sobic001G470300--Sobic002G060800 Sobic004G271600 Sobic004G271600 Sobic001G470300--Sobic004G271600 Sobic002G132400 Sobic002G132400 Sobic001G470300--Sobic002G132400 Sobic009G073900 Sobic009G073900 Sobic001G470300--Sobic009G073900 Sobic006G235400 Sobic006G235400 Sobic001G470300--Sobic006G235400 Sobic010G100900 Sobic010G100900 Sobic001G470300--Sobic010G100900 Sobic009G038701 Sobic009G038701 Sobic001G470300--Sobic009G038701 Sobic001G207800 Sobic001G207800 Sobic006G090100--Sobic001G207800 Sobic001G283100 Sobic001G283100 Sobic006G090100--Sobic001G283100 Sobic001G077300 Sobic001G077300 Sobic006G090100--Sobic001G077300 Sobic001G509200 Sobic001G509200 Sobic006G090100--Sobic001G509200 Sobic006G090100--Sobic009G073900 Sobic002G382700 Sobic002G382700 Sobic006G090100--Sobic002G382700 Sobic003G341300 Sobic003G341300 Sobic006G090100--Sobic003G341300 Sobic001G046000 Sobic001G046000 Sobic006G090100--Sobic001G046000 Sobic002G081400 Sobic002G081400 Sobic006G090100--Sobic002G081400 Sobic001G180200--Sobic003G341300 Sobic002G206300 Sobic002G206300 Sobic001G180200--Sobic002G206300 Sobic007G135800 Sobic007G135800 Sobic001G180200--Sobic007G135800 Sobic001G180200--Sobic009G038701 Sobic009G207900 Sobic009G207900 Sobic001G180200--Sobic009G207900 Sobic003G094100 Sobic003G094100 Sobic001G180200--Sobic003G094100 Sobic001G504400 Sobic001G504400 Sobic001G180200--Sobic001G504400 Sobic001G263100 Sobic001G263100 Sobic001G180200--Sobic001G263100 Sobic002G162400 Sobic002G162400 Sobic001G180200--Sobic002G162400 Sobic002G351200 Sobic002G351200 Sobic002G060800--Sobic002G351200 Sobic009G225600 Sobic009G225600 Sobic002G060800--Sobic009G225600 Sobic010G223200 Sobic010G223200 Sobic002G060800--Sobic010G223200 Sobic003G103300 Sobic003G103300 Sobic002G060800--Sobic003G103300 Sobic002G060800--Sobic001G046000 Sobic002G060800--Sobic006G090100 Sobic010G101000 Sobic010G101000 Sobic002G060800--Sobic010G101000 Sobic004G317700 Sobic004G317700 Sobic002G060800--Sobic004G317700 Sobic002G060800--Sobic004G271600 Sobic004G271600--Sobic002G132400 Sobic004G271600--Sobic002G081400 Sobic004G271600--Sobic010G100900 Sobic004G271600--Sobic002G351200 Sobic007G124500 Sobic007G124500 Sobic004G271600--Sobic007G124500 Sobic002G072500 Sobic002G072500 Sobic004G271600--Sobic002G072500 Sobic004G271600--Sobic006G090100 Sobic004G271600--Sobic001G509200 Sobic004G271600--Sobic002G060800 Sobic002G132400--Sobic004G271600 Sobic002G132400--Sobic010G100900 Sobic002G132400--Sobic002G351200 Sobic002G132400--Sobic001G509200 Sobic002G132400--Sobic007G135800 Sobic003G380200 Sobic003G380200 Sobic002G132400--Sobic003G380200 Sobic002G132400--Sobic007G124500 Sobic004G268400 Sobic004G268400 Sobic002G132400--Sobic004G268400 Sobic002G408000 Sobic002G408000 Sobic002G132400--Sobic002G408000 Sobic009G073900--Sobic001G077300 Sobic003G003450 Sobic003G003450 Sobic009G073900--Sobic003G003450 Sobic009G073900--Sobic006G090100 Sobic009G073900--Sobic001G509200 Sobic007G087100 Sobic007G087100 Sobic009G073900--Sobic007G087100 Sobic009G073900--Sobic003G094100 Sobic009G073900--Sobic002G081400 Sobic009G073900--Sobic007G135800 Sobic006G213700 Sobic006G213700 Sobic009G073900--Sobic006G213700 Sobic010G231300 Sobic010G231300 Sobic006G235400--Sobic010G231300 Sobic006G235400--Sobic001G077300 Sobic004G128900 Sobic004G128900 Sobic006G235400--Sobic004G128900 Sobic006G235400--Sobic003G341300 Sobic003G409700 Sobic003G409700 Sobic006G235400--Sobic003G409700 Sobic008G129900 Sobic008G129900 Sobic006G235400--Sobic008G129900 Sobic006G161500 Sobic006G161500 Sobic006G235400--Sobic006G161500 Sobic006G235400--Sobic003G380200 Sobic006G235400--Sobic001G180200 Sobic010G100900--Sobic002G351200 Sobic010G100900--Sobic003G380200 Sobic010G100900--Sobic002G132400 Sobic010G100900--Sobic004G268400 Sobic003G304300 Sobic003G304300 Sobic010G100900--Sobic003G304300 Sobic004G267700 Sobic004G267700 Sobic010G100900--Sobic004G267700 Sobic010G100900--Sobic004G271600 Sobic002G356900 Sobic002G356900 Sobic010G100900--Sobic002G356900 Sobic010G100900--Sobic004G128900 Sobic009G038701--Sobic002G206300 Sobic010G125833 Sobic010G125833 Sobic009G038701--Sobic010G125833 Sobic009G038701--Sobic001G504400 Sobic009G038701--Sobic001G180200 Sobic001G258200 Sobic001G258200 Sobic009G038701--Sobic001G258200 Sobic003G185900 Sobic003G185900 Sobic009G038701--Sobic003G185900 Sobic009G038701--Sobic008G129900 Sobic008G033000 Sobic008G033000 Sobic009G038701--Sobic008G033000 Sobic009G038701--Sobic009G207900
Octagon: transcription factors


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