Gene annotation
Transcriptome id Sobic.006G036300.1
Synonym FPF1, ATFPF1, Sb06g005000
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
flowering promoting factor-like 1, putative, expressed
UniProt C5YDP9
Pfam -
Panther DB PTHR33433 PTHR33433:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G24860 : flowering promoting factor 1
RAP-DB (Rice) LOC_Os04g21350.2 : flowering promoting factor-like 1, putative, expressed
MaizeGDB (Corn) Zm00025a055711 , Zm00025a012084
Brachypodium -
Barley HORVU6Hr1G005060.1 , HORVU6Hr1G005060.2
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.006G036300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G178000 - -
2 Sobic.006G145700 Probable inactive beta-glucosidase 14 (Precursor)(PubMedID : 26186930)@Os4bglu14 - monolignol beta-glucoside homologue without catalytic acid/base, expressed K05350: beta-glucosidase
3 Sobic.010G207100 methyltransferase domain containing protein, putative, expressed -
4 Sobic.001G434000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.002G132400 -(PubMedID : 26465154)@expressed protein -
6 Sobic.002G408000 KIP1, putative, expressed -
7 Sobic.001G492600 VQ domain containing protein, putative, expressed -
8 Sobic.004G271600 region found in RelA/SpoT proteins containing protein, expressed -
9 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
10 Sobic.002G213400 expressed protein -
11 Sobic.001G411100 expressed protein -
12 Sobic.010G100900 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase
13 Sobic.007G124500 methyltransferase, putative, expressed -
14 Sobic.002G072500 expressed protein -
15 Sobic.004G267700 hydrolase, alpha/beta fold family domain containing protein, expressed -
16 Sobic.002G108500 cytochrome P450, putative, expressed -
17 Sobic.001G250000 - -
18 Sobic.004G223400 OsWAK14 - OsWAK receptor-like protein kinase, expressed -
19 Sobic.007G016600 expressed protein -
20 Sobic.006G243800 OsWAK55 - OsWAK receptor-like protein kinase, expressed -


Gene co-expression network
sample Sobic006G036300 Sobic006G036300 Sobic010G178000 Sobic010G178000 Sobic006G036300--Sobic010G178000 Sobic006G145700 Sobic006G145700 Sobic006G036300--Sobic006G145700 Sobic010G207100 Sobic010G207100 Sobic006G036300--Sobic010G207100 Sobic001G434000 Sobic001G434000 Sobic006G036300--Sobic001G434000 Sobic002G132400 Sobic002G132400 Sobic006G036300--Sobic002G132400 Sobic002G408000 Sobic002G408000 Sobic006G036300--Sobic002G408000 Sobic001G492600 Sobic001G492600 Sobic006G036300--Sobic001G492600 Sobic004G271600 Sobic004G271600 Sobic006G036300--Sobic004G271600 Sobic002G351200 Sobic002G351200 Sobic006G036300--Sobic002G351200 Sobic010G178000--Sobic006G036300 Sobic003G154400 Sobic003G154400 Sobic010G178000--Sobic003G154400 Sobic010G178000--Sobic010G207100 Sobic002G108500 Sobic002G108500 Sobic010G178000--Sobic002G108500 Sobic010G178000--Sobic001G434000 Sobic010G178000--Sobic006G145700 Sobic005G002400 Sobic005G002400 Sobic010G178000--Sobic005G002400 Sobic006G020300 Sobic006G020300 Sobic010G178000--Sobic006G020300 Sobic004G190100 Sobic004G190100 Sobic010G178000--Sobic004G190100 Sobic006G145700--Sobic006G036300 Sobic006G145700--Sobic010G178000 Sobic002G213400 Sobic002G213400 Sobic006G145700--Sobic002G213400 Sobic010G177800 Sobic010G177800 Sobic006G145700--Sobic010G177800 Sobic001G411100 Sobic001G411100 Sobic006G145700--Sobic001G411100 Sobic001G104700 Sobic001G104700 Sobic006G145700--Sobic001G104700 Sobic006G145700--Sobic010G207100 Sobic006G145700--Sobic001G434000 Sobic006G041000 Sobic006G041000 Sobic006G145700--Sobic006G041000 Sobic007G016600 Sobic007G016600 Sobic010G207100--Sobic007G016600 Sobic010G207100--Sobic002G213400 Sobic010G207100--Sobic002G351200 Sobic001G018000 Sobic001G018000 Sobic010G207100--Sobic001G018000 Sobic010G207100--Sobic001G411100 Sobic007G124500 Sobic007G124500 Sobic010G207100--Sobic007G124500 Sobic004G268400 Sobic004G268400 Sobic010G207100--Sobic004G268400 Sobic010G100900 Sobic010G100900 Sobic010G207100--Sobic010G100900 Sobic002G356900 Sobic002G356900 Sobic010G207100--Sobic002G356900 Sobic001G434000--Sobic002G351200 Sobic001G434000--Sobic006G020300 Sobic001G434000--Sobic001G018000 Sobic002G030900 Sobic002G030900 Sobic001G434000--Sobic002G030900 Sobic001G434000--Sobic002G213400 Sobic010G101000 Sobic010G101000 Sobic001G434000--Sobic010G101000 Sobic010G104700 Sobic010G104700 Sobic001G434000--Sobic010G104700 Sobic004G267700 Sobic004G267700 Sobic001G434000--Sobic004G267700 Sobic001G434000--Sobic001G411100 Sobic002G132400--Sobic004G271600 Sobic002G132400--Sobic010G100900 Sobic002G132400--Sobic002G351200 Sobic001G509200 Sobic001G509200 Sobic002G132400--Sobic001G509200 Sobic007G135800 Sobic007G135800 Sobic002G132400--Sobic007G135800 Sobic003G380200 Sobic003G380200 Sobic002G132400--Sobic003G380200 Sobic002G132400--Sobic007G124500 Sobic002G132400--Sobic004G268400 Sobic002G132400--Sobic002G408000 Sobic002G408000--Sobic002G132400 Sobic002G408000--Sobic002G351200 Sobic002G408000--Sobic010G100900 Sobic002G408000--Sobic004G267700 Sobic006G191500 Sobic006G191500 Sobic002G408000--Sobic006G191500 Sobic009G246400 Sobic009G246400 Sobic002G408000--Sobic009G246400 Sobic002G408000--Sobic003G380200 Sobic003G304300 Sobic003G304300 Sobic002G408000--Sobic003G304300 Sobic002G408000--Sobic004G268400 Sobic003G080100 Sobic003G080100 Sobic001G492600--Sobic003G080100 Sobic001G492600--Sobic006G036300 Sobic001G492600--Sobic004G271600 Sobic003G012400 Sobic003G012400 Sobic001G492600--Sobic003G012400 Sobic001G492600--Sobic002G132400 Sobic006G120301 Sobic006G120301 Sobic001G492600--Sobic006G120301 Sobic001G492600--Sobic002G213400 Sobic001G492600--Sobic002G351200 Sobic005G093800 Sobic005G093800 Sobic001G492600--Sobic005G093800 Sobic004G271600--Sobic002G132400 Sobic002G081400 Sobic002G081400 Sobic004G271600--Sobic002G081400 Sobic004G271600--Sobic010G100900 Sobic004G271600--Sobic002G351200 Sobic004G271600--Sobic007G124500 Sobic002G072500 Sobic002G072500 Sobic004G271600--Sobic002G072500 Sobic006G090100 Sobic006G090100 Sobic004G271600--Sobic006G090100 Sobic004G271600--Sobic001G509200 Sobic002G060800 Sobic002G060800 Sobic004G271600--Sobic002G060800 Sobic002G351200--Sobic010G100900 Sobic002G351200--Sobic001G018000 Sobic002G351200--Sobic003G304300 Sobic002G351200--Sobic004G268400 Sobic002G351200--Sobic004G267700 Sobic002G351200--Sobic010G101000 Sobic002G351200--Sobic002G132400 Sobic003G186800 Sobic003G186800 Sobic002G351200--Sobic003G186800 Sobic002G351200--Sobic002G213400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.