Gene annotation
Transcriptome id Sobic.001G250000.2,Sobic.001G250000.3
Synonym
Functional annotation -
UniProt A0A1B6QKV5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G177900 - -
2 Sobic.002G044700 SAM dependent carboxyl methyltransferase, putative, expressed -
3 Sobic.006G025600 - -
4 Sobic.010G045100 -(PubMedID : 21930910)@-(PubMedID : 24884377)@osFTL2 FT-Like2 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
5 Sobic.010G207100 methyltransferase domain containing protein, putative, expressed -
6 Sobic.005G167000 - -
7 Sobic.004G252500 OsProtIV1 - Putative Protease IV homologue@ Domain 2 is a SPH, expressed K04773: protease IV
8 Sobic.006G276100 protein kinase family protein, putative, expressed -
9 Sobic.006G036300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@flowering promoting factor-like 1, putative, expressed -
10 Sobic.005G093800 NB-ARC domain containing protein, expressed K13457: RPM1, disease resistance protein RPM1
11 Sobic.004G165900 SOUL heme-binding protein, putative, expressed -
12 Sobic.004G271600 region found in RelA/SpoT proteins containing protein, expressed -
13 Sobic.007G124500 methyltransferase, putative, expressed -
14 Sobic.003G108900 -(PubMedID : 26465154)@peptidase, putative, expressed -
15 Sobic.002G213400 expressed protein -
16 Sobic.002G077400 receptor-like protein kinase precursor, putative, expressed -
17 Sobic.004G089200 ABC transporter, ATP-binding protein, putative, expressed -
18 Sobic.010G178401 - -
19 Sobic.009G004100 -(PubMedID : 26976818)@uncharacterized kinase mug58, putative, expressed K15918: D-glycerate 3-kinase
20 Sobic.001G411100 expressed protein -


Gene co-expression network
sample Sobic001G250000 Sobic001G250000 Sobic006G177900 Sobic006G177900 Sobic001G250000--Sobic006G177900 Sobic002G044700 Sobic002G044700 Sobic001G250000--Sobic002G044700 Sobic006G025600 Sobic006G025600 Sobic001G250000--Sobic006G025600 Sobic010G045100 Sobic010G045100 Sobic001G250000--Sobic010G045100 Sobic010G207100 Sobic010G207100 Sobic001G250000--Sobic010G207100 Sobic005G167000 Sobic005G167000 Sobic001G250000--Sobic005G167000 Sobic004G252500 Sobic004G252500 Sobic001G250000--Sobic004G252500 Sobic006G276100 Sobic006G276100 Sobic001G250000--Sobic006G276100 Sobic006G036300 Sobic006G036300 Sobic001G250000--Sobic006G036300 Sobic006G177900--Sobic001G250000 Sobic006G177900--Sobic002G044700 Sobic002G077400 Sobic002G077400 Sobic006G177900--Sobic002G077400 Sobic005G093800 Sobic005G093800 Sobic006G177900--Sobic005G093800 Sobic006G177900--Sobic006G025600 Sobic006G177900--Sobic004G252500 Sobic006G177900--Sobic006G276100 Sobic003G190100 Sobic003G190100 Sobic006G177900--Sobic003G190100 Sobic004G165900 Sobic004G165900 Sobic006G177900--Sobic004G165900 Sobic002G044700--Sobic006G025600 Sobic002G044700--Sobic010G045100 Sobic002G044700--Sobic001G250000 Sobic002G044700--Sobic006G177900 Sobic010G126200 Sobic010G126200 Sobic002G044700--Sobic010G126200 Sobic002G044700--Sobic006G276100 Sobic004G089200 Sobic004G089200 Sobic002G044700--Sobic004G089200 Sobic007G149700 Sobic007G149700 Sobic002G044700--Sobic007G149700 Sobic004G235750 Sobic004G235750 Sobic002G044700--Sobic004G235750 Sobic006G025600--Sobic002G044700 Sobic006G025600--Sobic004G089200 Sobic006G025600--Sobic006G276100 Sobic006G025600--Sobic001G250000 Sobic006G025500 Sobic006G025500 Sobic006G025600--Sobic006G025500 Sobic006G025600--Sobic006G177900 Sobic006G025600--Sobic004G252500 Sobic006G025600--Sobic010G126200 Sobic006G025600--Sobic007G149700 Sobic010G045100--Sobic002G044700 Sobic010G045100--Sobic001G250000 Sobic010G045100--Sobic005G167000 Sobic010G045100--Sobic006G025600 Sobic010G045100--Sobic006G177900 Sobic010G045100--Sobic006G276100 Sobic010G045100--Sobic010G126200 Sobic010G045100--Sobic004G235750 Sobic010G045100--Sobic006G036300 Sobic007G016600 Sobic007G016600 Sobic010G207100--Sobic007G016600 Sobic002G213400 Sobic002G213400 Sobic010G207100--Sobic002G213400 Sobic002G351200 Sobic002G351200 Sobic010G207100--Sobic002G351200 Sobic001G018000 Sobic001G018000 Sobic010G207100--Sobic001G018000 Sobic001G411100 Sobic001G411100 Sobic010G207100--Sobic001G411100 Sobic007G124500 Sobic007G124500 Sobic010G207100--Sobic007G124500 Sobic004G268400 Sobic004G268400 Sobic010G207100--Sobic004G268400 Sobic010G100900 Sobic010G100900 Sobic010G207100--Sobic010G100900 Sobic002G356900 Sobic002G356900 Sobic010G207100--Sobic002G356900 Sobic010G178000 Sobic010G178000 Sobic005G167000--Sobic010G178000 Sobic005G167000--Sobic010G045100 Sobic005G167000--Sobic001G250000 Sobic005G167000--Sobic010G207100 Sobic001G434000 Sobic001G434000 Sobic005G167000--Sobic001G434000 Sobic003G154400 Sobic003G154400 Sobic005G167000--Sobic003G154400 Sobic005G167000--Sobic006G036300 Sobic009G180550 Sobic009G180550 Sobic005G167000--Sobic009G180550 Sobic003G157000 Sobic003G157000 Sobic005G167000--Sobic003G157000 Sobic004G252500--Sobic004G165900 Sobic003G108900 Sobic003G108900 Sobic004G252500--Sobic003G108900 Sobic001G118400 Sobic001G118400 Sobic004G252500--Sobic001G118400 Sobic004G300100 Sobic004G300100 Sobic004G252500--Sobic004G300100 Sobic010G231500 Sobic010G231500 Sobic004G252500--Sobic010G231500 Sobic006G025400 Sobic006G025400 Sobic004G252500--Sobic006G025400 Sobic003G070900 Sobic003G070900 Sobic004G252500--Sobic003G070900 Sobic009G004100 Sobic009G004100 Sobic004G252500--Sobic009G004100 Sobic003G125900 Sobic003G125900 Sobic004G252500--Sobic003G125900 Sobic006G276100--Sobic006G025600 Sobic006G276100--Sobic002G044700 Sobic006G276100--Sobic006G177900 Sobic006G276100--Sobic004G089200 Sobic006G276100--Sobic001G250000 Sobic006G276100--Sobic004G252500 Sobic006G276100--Sobic003G108900 Sobic002G173100 Sobic002G173100 Sobic006G276100--Sobic002G173100 Sobic003G190000 Sobic003G190000 Sobic006G276100--Sobic003G190000 Sobic006G036300--Sobic010G178000 Sobic006G145700 Sobic006G145700 Sobic006G036300--Sobic006G145700 Sobic006G036300--Sobic010G207100 Sobic006G036300--Sobic001G434000 Sobic002G132400 Sobic002G132400 Sobic006G036300--Sobic002G132400 Sobic002G408000 Sobic002G408000 Sobic006G036300--Sobic002G408000 Sobic001G492600 Sobic001G492600 Sobic006G036300--Sobic001G492600 Sobic004G271600 Sobic004G271600 Sobic006G036300--Sobic004G271600 Sobic006G036300--Sobic002G351200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.