Gene annotation
Transcriptome id Sobic.006G025600.1
Synonym
Functional annotation -
UniProt A0A1B6PJP8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a012459
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G044700 SAM dependent carboxyl methyltransferase, putative, expressed -
2 Sobic.004G089200 ABC transporter, ATP-binding protein, putative, expressed -
3 Sobic.006G276100 protein kinase family protein, putative, expressed -
4 Sobic.001G250000 - -
5 Sobic.006G025500 - -
6 Sobic.006G177900 - -
7 Sobic.004G252500 OsProtIV1 - Putative Protease IV homologue@ Domain 2 is a SPH, expressed K04773: protease IV
8 Sobic.010G126200 - -
9 Sobic.007G149700 TKL_IRAK_DUF26-lh.11 - DUF26 kinases have homology to DUF26 containing loci, expressed -
10 Sobic.006G025400 - -
11 Sobic.004G165900 SOUL heme-binding protein, putative, expressed -
12 Sobic.008G157100 "BZIP transcription factor family protein, predicted target of novel-mir-617 expressed in the stems of sweet sorghum"(PubMedID : 26117170)@down-regulated TF in developmental senescence(PubMedID : 27586543)@bZIP transcription factor domain containing protein, expressed -
13 Sobic.010G045100 -(PubMedID : 21930910)@-(PubMedID : 24884377)@osFTL2 FT-Like2 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
14 Sobic.002G025700 lectin-like receptor kinase, putative, expressed -
15 Sobic.003G108900 -(PubMedID : 26465154)@peptidase, putative, expressed -
16 Sobic.010G208800 kinase, putative, expressed -
17 Sobic.005G005400 MATE efflux family protein(PubMedID : 26465154)@MATE efflux protein, putative, expressed -
18 Sobic.001G368600 NAD dependent epimerase/dehydratase family protein, putative, expressed -
19 Sobic.005G138600 - -
20 Sobic.002G173100 Leucine Rich Repeat family protein, expressed -


Gene co-expression network
sample Sobic006G025600 Sobic006G025600 Sobic002G044700 Sobic002G044700 Sobic006G025600--Sobic002G044700 Sobic004G089200 Sobic004G089200 Sobic006G025600--Sobic004G089200 Sobic006G276100 Sobic006G276100 Sobic006G025600--Sobic006G276100 Sobic001G250000 Sobic001G250000 Sobic006G025600--Sobic001G250000 Sobic006G025500 Sobic006G025500 Sobic006G025600--Sobic006G025500 Sobic006G177900 Sobic006G177900 Sobic006G025600--Sobic006G177900 Sobic004G252500 Sobic004G252500 Sobic006G025600--Sobic004G252500 Sobic010G126200 Sobic010G126200 Sobic006G025600--Sobic010G126200 Sobic007G149700 Sobic007G149700 Sobic006G025600--Sobic007G149700 Sobic002G044700--Sobic006G025600 Sobic010G045100 Sobic010G045100 Sobic002G044700--Sobic010G045100 Sobic002G044700--Sobic001G250000 Sobic002G044700--Sobic006G177900 Sobic002G044700--Sobic010G126200 Sobic002G044700--Sobic006G276100 Sobic002G044700--Sobic004G089200 Sobic002G044700--Sobic007G149700 Sobic004G235750 Sobic004G235750 Sobic002G044700--Sobic004G235750 Sobic002G025700 Sobic002G025700 Sobic004G089200--Sobic002G025700 Sobic008G157100 Sobic008G157100 Sobic004G089200--Sobic008G157100 Sobic004G089200--Sobic007G149700 Sobic004G089200--Sobic006G025600 Sobic004G089200--Sobic002G044700 Sobic004G089200--Sobic006G276100 Sobic010G205700 Sobic010G205700 Sobic004G089200--Sobic010G205700 Sobic004G300000 Sobic004G300000 Sobic004G089200--Sobic004G300000 Sobic002G354600 Sobic002G354600 Sobic004G089200--Sobic002G354600 Sobic006G276100--Sobic006G025600 Sobic006G276100--Sobic002G044700 Sobic006G276100--Sobic006G177900 Sobic006G276100--Sobic004G089200 Sobic006G276100--Sobic001G250000 Sobic006G276100--Sobic004G252500 Sobic003G108900 Sobic003G108900 Sobic006G276100--Sobic003G108900 Sobic002G173100 Sobic002G173100 Sobic006G276100--Sobic002G173100 Sobic003G190000 Sobic003G190000 Sobic006G276100--Sobic003G190000 Sobic001G250000--Sobic006G177900 Sobic001G250000--Sobic002G044700 Sobic001G250000--Sobic006G025600 Sobic001G250000--Sobic010G045100 Sobic010G207100 Sobic010G207100 Sobic001G250000--Sobic010G207100 Sobic005G167000 Sobic005G167000 Sobic001G250000--Sobic005G167000 Sobic001G250000--Sobic004G252500 Sobic001G250000--Sobic006G276100 Sobic006G036300 Sobic006G036300 Sobic001G250000--Sobic006G036300 Sobic001G368600 Sobic001G368600 Sobic006G025500--Sobic001G368600 Sobic002G061900 Sobic002G061900 Sobic006G025500--Sobic002G061900 Sobic009G004100 Sobic009G004100 Sobic006G025500--Sobic009G004100 Sobic006G097500 Sobic006G097500 Sobic006G025500--Sobic006G097500 Sobic010G231500 Sobic010G231500 Sobic006G025500--Sobic010G231500 Sobic004G165900 Sobic004G165900 Sobic006G025500--Sobic004G165900 Sobic002G072500 Sobic002G072500 Sobic006G025500--Sobic002G072500 Sobic002G298800 Sobic002G298800 Sobic006G025500--Sobic002G298800 Sobic004G103300 Sobic004G103300 Sobic006G025500--Sobic004G103300 Sobic006G177900--Sobic001G250000 Sobic006G177900--Sobic002G044700 Sobic002G077400 Sobic002G077400 Sobic006G177900--Sobic002G077400 Sobic005G093800 Sobic005G093800 Sobic006G177900--Sobic005G093800 Sobic006G177900--Sobic006G025600 Sobic006G177900--Sobic004G252500 Sobic006G177900--Sobic006G276100 Sobic003G190100 Sobic003G190100 Sobic006G177900--Sobic003G190100 Sobic006G177900--Sobic004G165900 Sobic004G252500--Sobic004G165900 Sobic004G252500--Sobic003G108900 Sobic001G118400 Sobic001G118400 Sobic004G252500--Sobic001G118400 Sobic004G300100 Sobic004G300100 Sobic004G252500--Sobic004G300100 Sobic004G252500--Sobic010G231500 Sobic006G025400 Sobic006G025400 Sobic004G252500--Sobic006G025400 Sobic003G070900 Sobic003G070900 Sobic004G252500--Sobic003G070900 Sobic004G252500--Sobic009G004100 Sobic003G125900 Sobic003G125900 Sobic004G252500--Sobic003G125900 Sobic002G071350 Sobic002G071350 Sobic010G126200--Sobic002G071350 Sobic010G126200--Sobic002G044700 Sobic007G043100 Sobic007G043100 Sobic010G126200--Sobic007G043100 Sobic002G428501 Sobic002G428501 Sobic010G126200--Sobic002G428501 Sobic002G190200 Sobic002G190200 Sobic010G126200--Sobic002G190200 Sobic010G126200--Sobic006G025600 Sobic007G149700--Sobic004G089200 Sobic007G149700--Sobic008G157100 Sobic007G149700--Sobic006G025600 Sobic007G149700--Sobic002G077400 Sobic007G149700--Sobic002G044700 Sobic007G149700--Sobic006G177900 Sobic007G149700--Sobic003G190100 Sobic001G126400 Sobic001G126400 Sobic007G149700--Sobic001G126400 Sobic001G009000 Sobic001G009000 Sobic007G149700--Sobic001G009000
Octagon: transcription factors


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