Gene annotation
Transcriptome id Sobic.010G045100.1,Sobic.010G045100.2
Synonym Sb10g003940, FT, FLOWERING LOCUS T , FT;SbCN15
Functional annotation - (PubMedID : 21930910)
- (PubMedID : 24884377)
osFTL2 FT-Like2 homologous to Flowering Locus T gene
contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed
UniProt C5Z4E6
Pfam PF01161
Panther DB PTHR11362 PTHR11362:SF9
NCBI CDD KOG3346; Phosphatidylethanolamine binding protein
KEGG Orthology K16223; protein FLOWERING LOCUS T
Gene Ontology GO:0009909; regulation of flower development GO:0008429phosphatidylethanolamine binding


Orthologs (automatic annotation)
TAIR AT1G65480 : PEBP (phosphatidylethanolamine-binding protein) family protein
RAP-DB (Rice) LOC_Os06g06320.1 : osFTL2 FT-Like2 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed
MaizeGDB (Corn) Zm00025a041582 , Zm00025a022987
Brachypodium KQK19531
Barley HORVU3Hr1G027590.8 , HORVU3Hr1G027590.9 , HORVU3Hr1G027590.1 , HORVU3Hr1G027590.2 , HORVU3Hr1G027590.3 , HORVU3Hr1G027590.4 , HORVU3Hr1G027590.5 , HORVU3Hr1G027590.6 , HORVU3Hr1G027590.7 , HORVU3Hr1G027590.12 , HORVU3Hr1G027590.13 , HORVU3Hr1G027590.10 , HORVU3Hr1G027590.11 , HORVU3Hr1G027590.14 , HORVU3Hr1G027590.15 , HORVU7Hr1G024610.2 , HORVU7Hr1G024610.1 , HORVU3Hr1G087100.1
Wheat TraesCS7B02G013100 , TraesCS3B02G162000 , TraesCS3B02G162000 , TraesCS3A02G143100 , TraesCS7A02G115400 , TraesCS3D02G144500 , TraesCS7D02G111600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G044700 SAM dependent carboxyl methyltransferase, putative, expressed -
2 Sobic.001G250000 - -
3 Sobic.005G167000 - -
4 Sobic.006G025600 - -
5 Sobic.006G177900 - -
6 Sobic.006G276100 protein kinase family protein, putative, expressed -
7 Sobic.010G126200 - -
8 Sobic.004G235750 - -
9 Sobic.006G036300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@flowering promoting factor-like 1, putative, expressed -
10 Sobic.007G149700 TKL_IRAK_DUF26-lh.11 - DUF26 kinases have homology to DUF26 containing loci, expressed -
11 Sobic.004G089200 ABC transporter, ATP-binding protein, putative, expressed -
12 Sobic.003G090900 seven in absentia protein family domain containing protein, expressed -
13 Sobic.005G093800 NB-ARC domain containing protein, expressed K13457: RPM1, disease resistance protein RPM1
14 Sobic.008G157100 "BZIP transcription factor family protein, predicted target of novel-mir-617 expressed in the stems of sweet sorghum"(PubMedID : 26117170)@down-regulated TF in developmental senescence(PubMedID : 27586543)@bZIP transcription factor domain containing protein, expressed -
15 Sobic.010G207100 methyltransferase domain containing protein, putative, expressed -
16 Sobic.004G223400 OsWAK14 - OsWAK receptor-like protein kinase, expressed -
17 Sobic.009G235500 homeodomain-related, putative, expressed -
18 Sobic.010G178000 - -
19 Sobic.002G077400 receptor-like protein kinase precursor, putative, expressed -
20 Sobic.005G156400 phytosulfokine receptor precursor, putative, expressed -


Gene co-expression network
sample Sobic010G045100 Sobic010G045100 Sobic002G044700 Sobic002G044700 Sobic010G045100--Sobic002G044700 Sobic001G250000 Sobic001G250000 Sobic010G045100--Sobic001G250000 Sobic005G167000 Sobic005G167000 Sobic010G045100--Sobic005G167000 Sobic006G025600 Sobic006G025600 Sobic010G045100--Sobic006G025600 Sobic006G177900 Sobic006G177900 Sobic010G045100--Sobic006G177900 Sobic006G276100 Sobic006G276100 Sobic010G045100--Sobic006G276100 Sobic010G126200 Sobic010G126200 Sobic010G045100--Sobic010G126200 Sobic004G235750 Sobic004G235750 Sobic010G045100--Sobic004G235750 Sobic006G036300 Sobic006G036300 Sobic010G045100--Sobic006G036300 Sobic002G044700--Sobic006G025600 Sobic002G044700--Sobic010G045100 Sobic002G044700--Sobic001G250000 Sobic002G044700--Sobic006G177900 Sobic002G044700--Sobic010G126200 Sobic002G044700--Sobic006G276100 Sobic004G089200 Sobic004G089200 Sobic002G044700--Sobic004G089200 Sobic007G149700 Sobic007G149700 Sobic002G044700--Sobic007G149700 Sobic002G044700--Sobic004G235750 Sobic001G250000--Sobic006G177900 Sobic001G250000--Sobic002G044700 Sobic001G250000--Sobic006G025600 Sobic001G250000--Sobic010G045100 Sobic010G207100 Sobic010G207100 Sobic001G250000--Sobic010G207100 Sobic001G250000--Sobic005G167000 Sobic004G252500 Sobic004G252500 Sobic001G250000--Sobic004G252500 Sobic001G250000--Sobic006G276100 Sobic001G250000--Sobic006G036300 Sobic010G178000 Sobic010G178000 Sobic005G167000--Sobic010G178000 Sobic005G167000--Sobic010G045100 Sobic005G167000--Sobic001G250000 Sobic005G167000--Sobic010G207100 Sobic001G434000 Sobic001G434000 Sobic005G167000--Sobic001G434000 Sobic003G154400 Sobic003G154400 Sobic005G167000--Sobic003G154400 Sobic005G167000--Sobic006G036300 Sobic009G180550 Sobic009G180550 Sobic005G167000--Sobic009G180550 Sobic003G157000 Sobic003G157000 Sobic005G167000--Sobic003G157000 Sobic006G025600--Sobic002G044700 Sobic006G025600--Sobic004G089200 Sobic006G025600--Sobic006G276100 Sobic006G025600--Sobic001G250000 Sobic006G025500 Sobic006G025500 Sobic006G025600--Sobic006G025500 Sobic006G025600--Sobic006G177900 Sobic006G025600--Sobic004G252500 Sobic006G025600--Sobic010G126200 Sobic006G025600--Sobic007G149700 Sobic006G177900--Sobic001G250000 Sobic006G177900--Sobic002G044700 Sobic002G077400 Sobic002G077400 Sobic006G177900--Sobic002G077400 Sobic005G093800 Sobic005G093800 Sobic006G177900--Sobic005G093800 Sobic006G177900--Sobic006G025600 Sobic006G177900--Sobic004G252500 Sobic006G177900--Sobic006G276100 Sobic003G190100 Sobic003G190100 Sobic006G177900--Sobic003G190100 Sobic004G165900 Sobic004G165900 Sobic006G177900--Sobic004G165900 Sobic006G276100--Sobic006G025600 Sobic006G276100--Sobic002G044700 Sobic006G276100--Sobic006G177900 Sobic006G276100--Sobic004G089200 Sobic006G276100--Sobic001G250000 Sobic006G276100--Sobic004G252500 Sobic003G108900 Sobic003G108900 Sobic006G276100--Sobic003G108900 Sobic002G173100 Sobic002G173100 Sobic006G276100--Sobic002G173100 Sobic003G190000 Sobic003G190000 Sobic006G276100--Sobic003G190000 Sobic002G071350 Sobic002G071350 Sobic010G126200--Sobic002G071350 Sobic010G126200--Sobic002G044700 Sobic007G043100 Sobic007G043100 Sobic010G126200--Sobic007G043100 Sobic002G428501 Sobic002G428501 Sobic010G126200--Sobic002G428501 Sobic002G190200 Sobic002G190200 Sobic010G126200--Sobic002G190200 Sobic010G126200--Sobic006G025600 Sobic004G235801 Sobic004G235801 Sobic004G235750--Sobic004G235801 Sobic004G235750--Sobic002G044700 Sobic004G235750--Sobic010G126200 Sobic004G235750--Sobic002G071350 Sobic004G235750--Sobic006G276100 Sobic004G235750--Sobic006G025600 Sobic006G036300--Sobic010G178000 Sobic006G145700 Sobic006G145700 Sobic006G036300--Sobic006G145700 Sobic006G036300--Sobic010G207100 Sobic006G036300--Sobic001G434000 Sobic002G132400 Sobic002G132400 Sobic006G036300--Sobic002G132400 Sobic002G408000 Sobic002G408000 Sobic006G036300--Sobic002G408000 Sobic001G492600 Sobic001G492600 Sobic006G036300--Sobic001G492600 Sobic004G271600 Sobic004G271600 Sobic006G036300--Sobic004G271600 Sobic002G351200 Sobic002G351200 Sobic006G036300--Sobic002G351200
Octagon: transcription factors


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