Gene annotation
Transcriptome id Sobic.003G090900.2
Synonym
Functional annotation seven in absentia protein family domain containing protein, expressed
UniProt A0A1W0VWE8
Pfam PF13920 PF03145
Panther DB PTHR10315 PTHR10315:SF30
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0007275; multicellular organism development GO:0006511ubiquitin-dependent protein catabolic process GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT5G37870 : Protein with RING/U-box and TRAF-like domains
RAP-DB (Rice) LOC_Os01g03290.1 : seven in absentia protein family domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G167000 - -
2 Sobic.010G045100 -(PubMedID : 21930910)@-(PubMedID : 24884377)@osFTL2 FT-Like2 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
3 Sobic.010G207100 methyltransferase domain containing protein, putative, expressed -
4 Sobic.003G080300 expressed protein -
5 Sobic.003G295300 -(PubMedID : 21930910)@-(PubMedID : 24884377)@osFTL9 FT-Like9 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein K16223: protein FLOWERING LOCUS T
6 Sobic.010G178000 - -
7 Sobic.001G250000 - -
8 Sobic.009G180550 - -
9 Sobic.002G213400 expressed protein -
10 Sobic.006G036300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@flowering promoting factor-like 1, putative, expressed -
11 Sobic.005G073800 OsFBX411 - F-box domain containing protein, expressed -
12 Sobic.001G434000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.003G129600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
14 Sobic.005G093800 NB-ARC domain containing protein, expressed K13457: RPM1, disease resistance protein RPM1
15 Sobic.002G431500 - -
16 Sobic.006G177900 - -
17 Sobic.010G092350 - -
18 Sobic.004G271600 region found in RelA/SpoT proteins containing protein, expressed -
19 Sobic.004G223400 OsWAK14 - OsWAK receptor-like protein kinase, expressed -
20 Sobic.003G157000 expressed protein -


Gene co-expression network
sample Sobic003G090900 Sobic003G090900 Sobic005G167000 Sobic005G167000 Sobic003G090900--Sobic005G167000 Sobic010G045100 Sobic010G045100 Sobic003G090900--Sobic010G045100 Sobic010G207100 Sobic010G207100 Sobic003G090900--Sobic010G207100 Sobic003G080300 Sobic003G080300 Sobic003G090900--Sobic003G080300 Sobic003G295300 Sobic003G295300 Sobic003G090900--Sobic003G295300 Sobic010G178000 Sobic010G178000 Sobic003G090900--Sobic010G178000 Sobic001G250000 Sobic001G250000 Sobic003G090900--Sobic001G250000 Sobic009G180550 Sobic009G180550 Sobic003G090900--Sobic009G180550 Sobic002G213400 Sobic002G213400 Sobic003G090900--Sobic002G213400 Sobic005G167000--Sobic010G178000 Sobic005G167000--Sobic010G045100 Sobic005G167000--Sobic001G250000 Sobic005G167000--Sobic010G207100 Sobic001G434000 Sobic001G434000 Sobic005G167000--Sobic001G434000 Sobic003G154400 Sobic003G154400 Sobic005G167000--Sobic003G154400 Sobic006G036300 Sobic006G036300 Sobic005G167000--Sobic006G036300 Sobic005G167000--Sobic009G180550 Sobic003G157000 Sobic003G157000 Sobic005G167000--Sobic003G157000 Sobic002G044700 Sobic002G044700 Sobic010G045100--Sobic002G044700 Sobic010G045100--Sobic001G250000 Sobic010G045100--Sobic005G167000 Sobic006G025600 Sobic006G025600 Sobic010G045100--Sobic006G025600 Sobic006G177900 Sobic006G177900 Sobic010G045100--Sobic006G177900 Sobic006G276100 Sobic006G276100 Sobic010G045100--Sobic006G276100 Sobic010G126200 Sobic010G126200 Sobic010G045100--Sobic010G126200 Sobic004G235750 Sobic004G235750 Sobic010G045100--Sobic004G235750 Sobic010G045100--Sobic006G036300 Sobic007G016600 Sobic007G016600 Sobic010G207100--Sobic007G016600 Sobic010G207100--Sobic002G213400 Sobic002G351200 Sobic002G351200 Sobic010G207100--Sobic002G351200 Sobic001G018000 Sobic001G018000 Sobic010G207100--Sobic001G018000 Sobic001G411100 Sobic001G411100 Sobic010G207100--Sobic001G411100 Sobic007G124500 Sobic007G124500 Sobic010G207100--Sobic007G124500 Sobic004G268400 Sobic004G268400 Sobic010G207100--Sobic004G268400 Sobic010G100900 Sobic010G100900 Sobic010G207100--Sobic010G100900 Sobic002G356900 Sobic002G356900 Sobic010G207100--Sobic002G356900 Sobic004G344600 Sobic004G344600 Sobic003G080300--Sobic004G344600 Sobic009G246400 Sobic009G246400 Sobic003G080300--Sobic009G246400 Sobic010G178401 Sobic010G178401 Sobic003G080300--Sobic010G178401 Sobic005G208200 Sobic005G208200 Sobic003G080300--Sobic005G208200 Sobic009G259100 Sobic009G259100 Sobic003G080300--Sobic009G259100 Sobic002G161400 Sobic002G161400 Sobic003G080300--Sobic002G161400 Sobic001G112900 Sobic001G112900 Sobic003G080300--Sobic001G112900 Sobic004G223400 Sobic004G223400 Sobic003G080300--Sobic004G223400 Sobic003G340300 Sobic003G340300 Sobic003G080300--Sobic003G340300 Sobic005G193300 Sobic005G193300 Sobic003G295300--Sobic005G193300 Sobic003G295300--Sobic004G223400 Sobic002G324400 Sobic002G324400 Sobic003G295300--Sobic002G324400 Sobic003G295300--Sobic003G080300 Sobic004G271600 Sobic004G271600 Sobic003G295300--Sobic004G271600 Sobic010G138800 Sobic010G138800 Sobic003G295300--Sobic010G138800 Sobic005G179300 Sobic005G179300 Sobic003G295300--Sobic005G179300 Sobic002G408000 Sobic002G408000 Sobic003G295300--Sobic002G408000 Sobic005G005400 Sobic005G005400 Sobic003G295300--Sobic005G005400 Sobic010G178000--Sobic006G036300 Sobic010G178000--Sobic003G154400 Sobic010G178000--Sobic010G207100 Sobic002G108500 Sobic002G108500 Sobic010G178000--Sobic002G108500 Sobic010G178000--Sobic001G434000 Sobic006G145700 Sobic006G145700 Sobic010G178000--Sobic006G145700 Sobic005G002400 Sobic005G002400 Sobic010G178000--Sobic005G002400 Sobic006G020300 Sobic006G020300 Sobic010G178000--Sobic006G020300 Sobic004G190100 Sobic004G190100 Sobic010G178000--Sobic004G190100 Sobic001G250000--Sobic006G177900 Sobic001G250000--Sobic002G044700 Sobic001G250000--Sobic006G025600 Sobic001G250000--Sobic010G045100 Sobic001G250000--Sobic010G207100 Sobic001G250000--Sobic005G167000 Sobic004G252500 Sobic004G252500 Sobic001G250000--Sobic004G252500 Sobic001G250000--Sobic006G276100 Sobic001G250000--Sobic006G036300 Sobic007G163433 Sobic007G163433 Sobic009G180550--Sobic007G163433 Sobic002G021900 Sobic002G021900 Sobic009G180550--Sobic002G021900 Sobic003G340350 Sobic003G340350 Sobic009G180550--Sobic003G340350 Sobic004G206800 Sobic004G206800 Sobic009G180550--Sobic004G206800 Sobic008G012100 Sobic008G012100 Sobic009G180550--Sobic008G012100 Sobic002G052100 Sobic002G052100 Sobic009G180550--Sobic002G052100 Sobic008G012150 Sobic008G012150 Sobic009G180550--Sobic008G012150 Sobic005G073800 Sobic005G073800 Sobic009G180550--Sobic005G073800 Sobic002G052000 Sobic002G052000 Sobic009G180550--Sobic002G052000 Sobic002G213400--Sobic002G351200 Sobic002G213400--Sobic010G207100 Sobic002G213400--Sobic001G018000 Sobic002G213400--Sobic007G016600 Sobic002G213400--Sobic001G434000 Sobic002G213400--Sobic010G100900 Sobic002G213400--Sobic004G268400 Sobic002G213400--Sobic007G124500 Sobic003G304300 Sobic003G304300 Sobic002G213400--Sobic003G304300
Octagon: transcription factors


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