Gene annotation
Transcriptome id Sobic.003G129600.1
Synonym Sb03g011030
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
-
UniProt A0A1B6Q2U5
Pfam -
Panther DB PTHR36893
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a035216
Brachypodium KQK03880 , KQK03881 , KQK03882 , KQK03883
Barley HORVU3Hr1G038870.10 , HORVU3Hr1G038870.22 , HORVU3Hr1G038870.23 , HORVU3Hr1G038870.20 , HORVU3Hr1G038870.21 , HORVU3Hr1G038870.26 , HORVU3Hr1G038870.27 , HORVU3Hr1G038870.24 , HORVU3Hr1G038870.25 , HORVU3Hr1G038870.28 , HORVU3Hr1G038870.29 , HORVU3Hr1G038870.32 , HORVU3Hr1G038870.13 , HORVU3Hr1G038870.12 , HORVU3Hr1G038870.37 , HORVU3Hr1G038870.19 , HORVU3Hr1G038870.18 , HORVU3Hr1G038870.39 , HORVU3Hr1G038870.38 , HORVU3Hr1G038870.35 , HORVU3Hr1G038870.34 , HORVU3Hr1G038870.11 , HORVU3Hr1G038870.36 , HORVU3Hr1G038870.17 , HORVU3Hr1G038870.16 , HORVU3Hr1G038870.33 , HORVU3Hr1G038870.14 , HORVU3Hr1G038870.15 , HORVU3Hr1G038870.31 , HORVU3Hr1G038870.9 , HORVU3Hr1G038870.8 , HORVU3Hr1G038870.3 , HORVU3Hr1G038870.2 , HORVU3Hr1G038870.1 , HORVU3Hr1G038870.6 , HORVU3Hr1G038870.5 , HORVU3Hr1G038870.4 , HORVU3Hr1G038870.30 , HORVU3Hr1G038870.40
Wheat TraesCS3A02G188000 , TraesCS3D02G191700 , TraesCS3D02G191700 , TraesCS3B02G217400 , TraesCS3D02G191700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G157000 expressed protein -
2 Sobic.002G072100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.005G093800 NB-ARC domain containing protein, expressed K13457: RPM1, disease resistance protein RPM1
4 Sobic.009G130000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endo-1,3@1,4-beta-D-glucanase precursor, putative, expressed -
5 Sobic.006G177900 - -
6 Sobic.010G223200 OsFtsH2 FtsH protease, homologue of AtFtsH2/8, expressed K03798: ftsH, cell division protease FtsH
7 Sobic.010G092350 - -
8 Sobic.006G051800 calmodulin-binding transcription activator 4, putative, expressed -
9 Sobic.006G276100 protein kinase family protein, putative, expressed -
10 Sobic.005G156400 phytosulfokine receptor precursor, putative, expressed -
11 Sobic.010G121200 - -
12 Sobic.010G272800 OsFtsH1 FtsH protease, homologue of AtFtsH1/5, expressed K03798: ftsH, cell division protease FtsH
13 Sobic.002G173100 Leucine Rich Repeat family protein, expressed -
14 Sobic.002G169400 Leucine Rich Repeat family protein, expressed -
15 Sobic.002G431500 - -
16 Sobic.005G075100 rp3 protein, putative, expressed -
17 Sobic.008G081900 ATP-dependent Clp protease ATP-binding subunit clpA homolog,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
18 Sobic.004G271600 region found in RelA/SpoT proteins containing protein, expressed -
19 Sobic.010G207100 methyltransferase domain containing protein, putative, expressed -
20 Sobic.001G250000 - -


Gene co-expression network
sample Sobic003G129600 Sobic003G129600 Sobic003G157000 Sobic003G157000 Sobic003G129600--Sobic003G157000 Sobic002G072100 Sobic002G072100 Sobic003G129600--Sobic002G072100 Sobic005G093800 Sobic005G093800 Sobic003G129600--Sobic005G093800 Sobic009G130000 Sobic009G130000 Sobic003G129600--Sobic009G130000 Sobic006G177900 Sobic006G177900 Sobic003G129600--Sobic006G177900 Sobic010G223200 Sobic010G223200 Sobic003G129600--Sobic010G223200 Sobic010G092350 Sobic010G092350 Sobic003G129600--Sobic010G092350 Sobic006G051800 Sobic006G051800 Sobic003G129600--Sobic006G051800 Sobic006G276100 Sobic006G276100 Sobic003G129600--Sobic006G276100 Sobic003G157000--Sobic010G092350 Sobic010G178000 Sobic010G178000 Sobic003G157000--Sobic010G178000 Sobic003G157000--Sobic010G223200 Sobic005G167000 Sobic005G167000 Sobic003G157000--Sobic005G167000 Sobic010G207100 Sobic010G207100 Sobic003G157000--Sobic010G207100 Sobic003G157000--Sobic003G129600 Sobic006G036300 Sobic006G036300 Sobic003G157000--Sobic006G036300 Sobic002G275200 Sobic002G275200 Sobic003G157000--Sobic002G275200 Sobic003G154400 Sobic003G154400 Sobic003G157000--Sobic003G154400 Sobic001G029200 Sobic001G029200 Sobic002G072100--Sobic001G029200 Sobic001G413000 Sobic001G413000 Sobic002G072100--Sobic001G413000 Sobic010G035500 Sobic010G035500 Sobic002G072100--Sobic010G035500 Sobic010G272800 Sobic010G272800 Sobic002G072100--Sobic010G272800 Sobic006G259600 Sobic006G259600 Sobic002G072100--Sobic006G259600 Sobic008G081900 Sobic008G081900 Sobic002G072100--Sobic008G081900 Sobic008G027200 Sobic008G027200 Sobic002G072100--Sobic008G027200 Sobic001G086800 Sobic001G086800 Sobic002G072100--Sobic001G086800 Sobic002G072100--Sobic003G129600 Sobic003G190100 Sobic003G190100 Sobic005G093800--Sobic003G190100 Sobic005G093800--Sobic006G177900 Sobic004G271600 Sobic004G271600 Sobic005G093800--Sobic004G271600 Sobic002G173100 Sobic002G173100 Sobic005G093800--Sobic002G173100 Sobic002G077400 Sobic002G077400 Sobic005G093800--Sobic002G077400 Sobic010G121200 Sobic010G121200 Sobic005G093800--Sobic010G121200 Sobic002G115050 Sobic002G115050 Sobic005G093800--Sobic002G115050 Sobic008G166550 Sobic008G166550 Sobic005G093800--Sobic008G166550 Sobic001G492600 Sobic001G492600 Sobic005G093800--Sobic001G492600 Sobic009G130000--Sobic005G093800 Sobic005G156400 Sobic005G156400 Sobic009G130000--Sobic005G156400 Sobic009G130000--Sobic006G276100 Sobic001G227900 Sobic001G227900 Sobic009G130000--Sobic001G227900 Sobic009G130000--Sobic002G115050 Sobic005G075100 Sobic005G075100 Sobic009G130000--Sobic005G075100 Sobic009G130000--Sobic003G129600 Sobic002G059932 Sobic002G059932 Sobic009G130000--Sobic002G059932 Sobic009G130000--Sobic003G190100 Sobic001G250000 Sobic001G250000 Sobic006G177900--Sobic001G250000 Sobic002G044700 Sobic002G044700 Sobic006G177900--Sobic002G044700 Sobic006G177900--Sobic002G077400 Sobic006G177900--Sobic005G093800 Sobic006G025600 Sobic006G025600 Sobic006G177900--Sobic006G025600 Sobic004G252500 Sobic004G252500 Sobic006G177900--Sobic004G252500 Sobic006G177900--Sobic006G276100 Sobic006G177900--Sobic003G190100 Sobic004G165900 Sobic004G165900 Sobic006G177900--Sobic004G165900 Sobic002G060800 Sobic002G060800 Sobic010G223200--Sobic002G060800 Sobic002G291800 Sobic002G291800 Sobic010G223200--Sobic002G291800 Sobic007G006200 Sobic007G006200 Sobic010G223200--Sobic007G006200 Sobic002G351200 Sobic002G351200 Sobic010G223200--Sobic002G351200 Sobic010G223200--Sobic004G271600 Sobic004G317700 Sobic004G317700 Sobic010G223200--Sobic004G317700 Sobic002G275100 Sobic002G275100 Sobic010G223200--Sobic002G275100 Sobic010G223200--Sobic010G207100 Sobic002G132400 Sobic002G132400 Sobic010G223200--Sobic002G132400 Sobic010G092350--Sobic010G223200 Sobic009G040400 Sobic009G040400 Sobic010G092350--Sobic009G040400 Sobic010G092350--Sobic010G207100 Sobic004G300100 Sobic004G300100 Sobic010G092350--Sobic004G300100 Sobic002G356900 Sobic002G356900 Sobic010G092350--Sobic002G356900 Sobic010G092350--Sobic004G271600 Sobic003G029500 Sobic003G029500 Sobic010G092350--Sobic003G029500 Sobic010G092350--Sobic002G060800 Sobic010G092350--Sobic002G291800 Sobic006G051800--Sobic003G029500 Sobic009G074400 Sobic009G074400 Sobic006G051800--Sobic009G074400 Sobic004G231900 Sobic004G231900 Sobic006G051800--Sobic004G231900 Sobic002G383600 Sobic002G383600 Sobic006G051800--Sobic002G383600 Sobic006G219600 Sobic006G219600 Sobic006G051800--Sobic006G219600 Sobic004G189200 Sobic004G189200 Sobic006G051800--Sobic004G189200 Sobic006G257800 Sobic006G257800 Sobic006G051800--Sobic006G257800 Sobic005G201000 Sobic005G201000 Sobic006G051800--Sobic005G201000 Sobic008G167600 Sobic008G167600 Sobic006G051800--Sobic008G167600 Sobic006G276100--Sobic006G025600 Sobic006G276100--Sobic002G044700 Sobic006G276100--Sobic006G177900 Sobic004G089200 Sobic004G089200 Sobic006G276100--Sobic004G089200 Sobic006G276100--Sobic001G250000 Sobic006G276100--Sobic004G252500 Sobic003G108900 Sobic003G108900 Sobic006G276100--Sobic003G108900 Sobic006G276100--Sobic002G173100 Sobic003G190000 Sobic003G190000 Sobic006G276100--Sobic003G190000
Octagon: transcription factors


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