Gene annotation
Transcriptome id Sobic.009G130000.1
Synonym Sb09g019650
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
endo-1,3
1,4-beta-D-glucanase precursor, putative, expressed
UniProt C5YXM3
Pfam PF12695
Panther DB PTHR17630 PTHR17630:SF53
NCBI CDD KOG3043; Predicted hydrolase related to dienelactone hydrolase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G23600 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os05g33110.1 : endo-1,3;1,4-beta-D-glucanase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a037033
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G093800 NB-ARC domain containing protein, expressed K13457: RPM1, disease resistance protein RPM1
2 Sobic.005G156400 phytosulfokine receptor precursor, putative, expressed -
3 Sobic.006G276100 protein kinase family protein, putative, expressed -
4 Sobic.001G227900 -(PubMedID : 21930910)@-(PubMedID : 24884377)@two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
5 Sobic.002G115050 - -
6 Sobic.005G075100 rp3 protein, putative, expressed -
7 Sobic.003G129600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
8 Sobic.002G059932 - -
9 Sobic.003G190100 vacuolar-processing enzyme precursor, putative, expressed K01369: legumain
10 Sobic.008G081900 ATP-dependent Clp protease ATP-binding subunit clpA homolog,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
11 Sobic.010G121200 - -
12 Sobic.003G080700 Ser/Thr protein kinase, putative, expressed -
13 Sobic.008G166550 - -
14 Sobic.006G177900 - -
15 Sobic.002G173100 Leucine Rich Repeat family protein, expressed -
16 Sobic.002G044700 SAM dependent carboxyl methyltransferase, putative, expressed -
17 Sobic.002G345700 insulin-degrading enzyme, putative, expressed K01408: IDE, insulysin
18 Sobic.002G115075 - -
19 Sobic.003G190000 PPR repeat domain containing protein, putative, expressed -
20 Sobic.008G081800 expressed protein -


Gene co-expression network
sample Sobic009G130000 Sobic009G130000 Sobic005G093800 Sobic005G093800 Sobic009G130000--Sobic005G093800 Sobic005G156400 Sobic005G156400 Sobic009G130000--Sobic005G156400 Sobic006G276100 Sobic006G276100 Sobic009G130000--Sobic006G276100 Sobic001G227900 Sobic001G227900 Sobic009G130000--Sobic001G227900 Sobic002G115050 Sobic002G115050 Sobic009G130000--Sobic002G115050 Sobic005G075100 Sobic005G075100 Sobic009G130000--Sobic005G075100 Sobic003G129600 Sobic003G129600 Sobic009G130000--Sobic003G129600 Sobic002G059932 Sobic002G059932 Sobic009G130000--Sobic002G059932 Sobic003G190100 Sobic003G190100 Sobic009G130000--Sobic003G190100 Sobic005G093800--Sobic003G190100 Sobic006G177900 Sobic006G177900 Sobic005G093800--Sobic006G177900 Sobic004G271600 Sobic004G271600 Sobic005G093800--Sobic004G271600 Sobic002G173100 Sobic002G173100 Sobic005G093800--Sobic002G173100 Sobic002G077400 Sobic002G077400 Sobic005G093800--Sobic002G077400 Sobic010G121200 Sobic010G121200 Sobic005G093800--Sobic010G121200 Sobic005G093800--Sobic002G115050 Sobic008G166550 Sobic008G166550 Sobic005G093800--Sobic008G166550 Sobic001G492600 Sobic001G492600 Sobic005G093800--Sobic001G492600 Sobic005G156400--Sobic002G059932 Sobic005G156400--Sobic005G093800 Sobic005G156400--Sobic009G130000 Sobic002G044700 Sobic002G044700 Sobic005G156400--Sobic002G044700 Sobic005G156400--Sobic001G227900 Sobic005G156400--Sobic003G190100 Sobic005G156400--Sobic006G177900 Sobic005G156400--Sobic003G129600 Sobic005G156400--Sobic006G276100 Sobic006G025600 Sobic006G025600 Sobic006G276100--Sobic006G025600 Sobic006G276100--Sobic002G044700 Sobic006G276100--Sobic006G177900 Sobic004G089200 Sobic004G089200 Sobic006G276100--Sobic004G089200 Sobic001G250000 Sobic001G250000 Sobic006G276100--Sobic001G250000 Sobic004G252500 Sobic004G252500 Sobic006G276100--Sobic004G252500 Sobic003G108900 Sobic003G108900 Sobic006G276100--Sobic003G108900 Sobic006G276100--Sobic002G173100 Sobic003G190000 Sobic003G190000 Sobic006G276100--Sobic003G190000 Sobic003G416000 Sobic003G416000 Sobic001G227900--Sobic003G416000 Sobic007G198400 Sobic007G198400 Sobic001G227900--Sobic007G198400 Sobic003G080700 Sobic003G080700 Sobic001G227900--Sobic003G080700 Sobic002G017500 Sobic002G017500 Sobic001G227900--Sobic002G017500 Sobic001G227900--Sobic005G093800 Sobic001G227900--Sobic008G166550 Sobic007G202300 Sobic007G202300 Sobic001G227900--Sobic007G202300 Sobic001G227900--Sobic009G130000 Sobic002G244200 Sobic002G244200 Sobic001G227900--Sobic002G244200 Sobic002G115050--Sobic005G075100 Sobic010G141966 Sobic010G141966 Sobic002G115050--Sobic010G141966 Sobic002G115050--Sobic005G093800 Sobic002G115050--Sobic008G166550 Sobic002G097700 Sobic002G097700 Sobic002G115050--Sobic002G097700 Sobic002G115075 Sobic002G115075 Sobic002G115050--Sobic002G115075 Sobic004G038800 Sobic004G038800 Sobic002G115050--Sobic004G038800 Sobic004G181600 Sobic004G181600 Sobic002G115050--Sobic004G181600 Sobic003G127001 Sobic003G127001 Sobic002G115050--Sobic003G127001 Sobic005G075100--Sobic002G115050 Sobic005G075100--Sobic004G181600 Sobic005G075100--Sobic002G173100 Sobic002G345700 Sobic002G345700 Sobic005G075100--Sobic002G345700 Sobic005G075100--Sobic003G190000 Sobic005G075100--Sobic010G141966 Sobic006G133900 Sobic006G133900 Sobic005G075100--Sobic006G133900 Sobic006G219600 Sobic006G219600 Sobic005G075100--Sobic006G219600 Sobic009G097200 Sobic009G097200 Sobic005G075100--Sobic009G097200 Sobic003G157000 Sobic003G157000 Sobic003G129600--Sobic003G157000 Sobic002G072100 Sobic002G072100 Sobic003G129600--Sobic002G072100 Sobic003G129600--Sobic005G093800 Sobic003G129600--Sobic009G130000 Sobic003G129600--Sobic006G177900 Sobic010G223200 Sobic010G223200 Sobic003G129600--Sobic010G223200 Sobic010G092350 Sobic010G092350 Sobic003G129600--Sobic010G092350 Sobic006G051800 Sobic006G051800 Sobic003G129600--Sobic006G051800 Sobic003G129600--Sobic006G276100 Sobic002G059932--Sobic005G156400 Sobic002G190200 Sobic002G190200 Sobic002G059932--Sobic002G190200 Sobic002G059932--Sobic009G130000 Sobic002G059932--Sobic002G044700 Sobic002G071350 Sobic002G071350 Sobic002G059932--Sobic002G071350 Sobic001G363900 Sobic001G363900 Sobic002G059932--Sobic001G363900 Sobic003G190100--Sobic002G173100 Sobic003G190100--Sobic005G093800 Sobic003G190100--Sobic002G077400 Sobic003G190100--Sobic002G244200 Sobic003G190100--Sobic004G271600 Sobic007G185300 Sobic007G185300 Sobic003G190100--Sobic007G185300 Sobic007G133000 Sobic007G133000 Sobic003G190100--Sobic007G133000 Sobic003G190100--Sobic006G177900 Sobic005G179300 Sobic005G179300 Sobic003G190100--Sobic005G179300
Octagon: transcription factors


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