Gene annotation
Transcriptome id Sobic.003G157000.1
Synonym Sb03g013680
Functional annotation expressed protein
UniProt C5XJU3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g23990.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G092350 - -
2 Sobic.010G178000 - -
3 Sobic.010G223200 OsFtsH2 FtsH protease, homologue of AtFtsH2/8, expressed K03798: ftsH, cell division protease FtsH
4 Sobic.005G167000 - -
5 Sobic.010G207100 methyltransferase domain containing protein, putative, expressed -
6 Sobic.003G129600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
7 Sobic.006G036300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@flowering promoting factor-like 1, putative, expressed -
8 Sobic.002G275200 PPR repeat containing protein, expressed -
9 Sobic.003G154400 OsSCP3 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
10 Sobic.009G040400 WD domain, G-beta repeat domain containing protein, expressed K11801: DDB1- and CUL4-associated factor 11
11 Sobic.007G112450 - -
12 Sobic.001G434000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.010G272800 OsFtsH1 FtsH protease, homologue of AtFtsH1/5, expressed K03798: ftsH, cell division protease FtsH
14 Sobic.009G180550 - -
15 Sobic.006G145700 Probable inactive beta-glucosidase 14 (Precursor)(PubMedID : 26186930)@Os4bglu14 - monolignol beta-glucoside homologue without catalytic acid/base, expressed K05350: beta-glucosidase
16 Sobic.004G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CPuORF19 - conserved peptide uORF-containing transcript, expressed -
17 Sobic.006G020300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
18 Sobic.002G060800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf45, putative, expressed -
19 Sobic.001G250000 - -
20 Sobic.002G072100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic003G157000 Sobic003G157000 Sobic010G092350 Sobic010G092350 Sobic003G157000--Sobic010G092350 Sobic010G178000 Sobic010G178000 Sobic003G157000--Sobic010G178000 Sobic010G223200 Sobic010G223200 Sobic003G157000--Sobic010G223200 Sobic005G167000 Sobic005G167000 Sobic003G157000--Sobic005G167000 Sobic010G207100 Sobic010G207100 Sobic003G157000--Sobic010G207100 Sobic003G129600 Sobic003G129600 Sobic003G157000--Sobic003G129600 Sobic006G036300 Sobic006G036300 Sobic003G157000--Sobic006G036300 Sobic002G275200 Sobic002G275200 Sobic003G157000--Sobic002G275200 Sobic003G154400 Sobic003G154400 Sobic003G157000--Sobic003G154400 Sobic010G092350--Sobic010G223200 Sobic009G040400 Sobic009G040400 Sobic010G092350--Sobic009G040400 Sobic010G092350--Sobic010G207100 Sobic004G300100 Sobic004G300100 Sobic010G092350--Sobic004G300100 Sobic002G356900 Sobic002G356900 Sobic010G092350--Sobic002G356900 Sobic004G271600 Sobic004G271600 Sobic010G092350--Sobic004G271600 Sobic003G029500 Sobic003G029500 Sobic010G092350--Sobic003G029500 Sobic002G060800 Sobic002G060800 Sobic010G092350--Sobic002G060800 Sobic002G291800 Sobic002G291800 Sobic010G092350--Sobic002G291800 Sobic010G178000--Sobic006G036300 Sobic010G178000--Sobic003G154400 Sobic010G178000--Sobic010G207100 Sobic002G108500 Sobic002G108500 Sobic010G178000--Sobic002G108500 Sobic001G434000 Sobic001G434000 Sobic010G178000--Sobic001G434000 Sobic006G145700 Sobic006G145700 Sobic010G178000--Sobic006G145700 Sobic005G002400 Sobic005G002400 Sobic010G178000--Sobic005G002400 Sobic006G020300 Sobic006G020300 Sobic010G178000--Sobic006G020300 Sobic004G190100 Sobic004G190100 Sobic010G178000--Sobic004G190100 Sobic010G223200--Sobic002G060800 Sobic010G223200--Sobic002G291800 Sobic007G006200 Sobic007G006200 Sobic010G223200--Sobic007G006200 Sobic002G351200 Sobic002G351200 Sobic010G223200--Sobic002G351200 Sobic010G223200--Sobic004G271600 Sobic004G317700 Sobic004G317700 Sobic010G223200--Sobic004G317700 Sobic002G275100 Sobic002G275100 Sobic010G223200--Sobic002G275100 Sobic010G223200--Sobic010G207100 Sobic002G132400 Sobic002G132400 Sobic010G223200--Sobic002G132400 Sobic005G167000--Sobic010G178000 Sobic010G045100 Sobic010G045100 Sobic005G167000--Sobic010G045100 Sobic001G250000 Sobic001G250000 Sobic005G167000--Sobic001G250000 Sobic005G167000--Sobic010G207100 Sobic005G167000--Sobic001G434000 Sobic005G167000--Sobic003G154400 Sobic005G167000--Sobic006G036300 Sobic009G180550 Sobic009G180550 Sobic005G167000--Sobic009G180550 Sobic005G167000--Sobic003G157000 Sobic007G016600 Sobic007G016600 Sobic010G207100--Sobic007G016600 Sobic002G213400 Sobic002G213400 Sobic010G207100--Sobic002G213400 Sobic010G207100--Sobic002G351200 Sobic001G018000 Sobic001G018000 Sobic010G207100--Sobic001G018000 Sobic001G411100 Sobic001G411100 Sobic010G207100--Sobic001G411100 Sobic007G124500 Sobic007G124500 Sobic010G207100--Sobic007G124500 Sobic004G268400 Sobic004G268400 Sobic010G207100--Sobic004G268400 Sobic010G100900 Sobic010G100900 Sobic010G207100--Sobic010G100900 Sobic010G207100--Sobic002G356900 Sobic003G129600--Sobic003G157000 Sobic002G072100 Sobic002G072100 Sobic003G129600--Sobic002G072100 Sobic005G093800 Sobic005G093800 Sobic003G129600--Sobic005G093800 Sobic009G130000 Sobic009G130000 Sobic003G129600--Sobic009G130000 Sobic006G177900 Sobic006G177900 Sobic003G129600--Sobic006G177900 Sobic003G129600--Sobic010G223200 Sobic003G129600--Sobic010G092350 Sobic006G051800 Sobic006G051800 Sobic003G129600--Sobic006G051800 Sobic006G276100 Sobic006G276100 Sobic003G129600--Sobic006G276100 Sobic006G036300--Sobic010G178000 Sobic006G036300--Sobic006G145700 Sobic006G036300--Sobic010G207100 Sobic006G036300--Sobic001G434000 Sobic006G036300--Sobic002G132400 Sobic002G408000 Sobic002G408000 Sobic006G036300--Sobic002G408000 Sobic001G492600 Sobic001G492600 Sobic006G036300--Sobic001G492600 Sobic006G036300--Sobic004G271600 Sobic006G036300--Sobic002G351200 Sobic002G275200--Sobic009G040400 Sobic008G002400 Sobic008G002400 Sobic002G275200--Sobic008G002400 Sobic009G259100 Sobic009G259100 Sobic002G275200--Sobic009G259100 Sobic002G275200--Sobic002G275100 Sobic002G275200--Sobic005G002400 Sobic005G132000 Sobic005G132000 Sobic002G275200--Sobic005G132000 Sobic002G275200--Sobic010G178000 Sobic002G275200--Sobic002G356900 Sobic002G275200--Sobic003G029500 Sobic002G052100 Sobic002G052100 Sobic003G154400--Sobic002G052100 Sobic003G154400--Sobic005G002400 Sobic003G154400--Sobic006G020300 Sobic003G154400--Sobic007G016600 Sobic003G175800 Sobic003G175800 Sobic003G154400--Sobic003G175800 Sobic002G052000 Sobic002G052000 Sobic003G154400--Sobic002G052000 Sobic003G154400--Sobic008G002400 Sobic001G181100 Sobic001G181100 Sobic003G154400--Sobic001G181100 Sobic004G214800 Sobic004G214800 Sobic003G154400--Sobic004G214800
Octagon: transcription factors


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