Gene annotation
Transcriptome id Sobic.003G080300.2
Synonym
Functional annotation expressed protein
UniProt A0A1W0VW58
Pfam PF13947
Panther DB PTHR33138 PTHR33138:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g04470.1 : expressed protein
MaizeGDB (Corn) Zm00025a023548
Brachypodium KQK02584 , PNT69894 , KQK02575
Barley HORVU3Hr1G007720.6
Wheat TraesCS3B02G058700 , TraesCS6D02G003900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G344600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
2 Sobic.009G246400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyprenyl synthetase, putative, expressed K05356: SPS, all-trans-nonaprenyl-diphosphate synthase
3 Sobic.010G178401 - -
4 Sobic.005G208200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
5 Sobic.009G259100 CCT motif family protein, expressed -
6 Sobic.002G161400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
7 Sobic.001G112900 expressed protein -
8 Sobic.004G223400 OsWAK14 - OsWAK receptor-like protein kinase, expressed -
9 Sobic.003G340300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nodulin, putative, expressed -
10 Sobic.010G100900 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase
11 Sobic.004G128900 GTP-binding protein typA/bipA, putative, expressed K06207: typA, GTP-binding protein
12 Sobic.003G304300 expressed protein -
13 Sobic.003G339200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.007G016600 expressed protein -
15 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
16 Sobic.003G380200 SNARE associated Golgi protein, putative, expressed -
17 Sobic.005G073800 OsFBX411 - F-box domain containing protein, expressed -
18 Sobic.006G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
19 Sobic.006G235300 expressed protein -
20 Sobic.010G178000 - -


Gene co-expression network
sample Sobic003G080300 Sobic003G080300 Sobic004G344600 Sobic004G344600 Sobic003G080300--Sobic004G344600 Sobic009G246400 Sobic009G246400 Sobic003G080300--Sobic009G246400 Sobic010G178401 Sobic010G178401 Sobic003G080300--Sobic010G178401 Sobic005G208200 Sobic005G208200 Sobic003G080300--Sobic005G208200 Sobic009G259100 Sobic009G259100 Sobic003G080300--Sobic009G259100 Sobic002G161400 Sobic002G161400 Sobic003G080300--Sobic002G161400 Sobic001G112900 Sobic001G112900 Sobic003G080300--Sobic001G112900 Sobic004G223400 Sobic004G223400 Sobic003G080300--Sobic004G223400 Sobic003G340300 Sobic003G340300 Sobic003G080300--Sobic003G340300 Sobic004G344600--Sobic002G161400 Sobic004G344600--Sobic001G112900 Sobic003G339200 Sobic003G339200 Sobic004G344600--Sobic003G339200 Sobic003G304300 Sobic003G304300 Sobic004G344600--Sobic003G304300 Sobic006G191500 Sobic006G191500 Sobic004G344600--Sobic006G191500 Sobic010G104700 Sobic010G104700 Sobic004G344600--Sobic010G104700 Sobic001G485100 Sobic001G485100 Sobic004G344600--Sobic001G485100 Sobic004G128900 Sobic004G128900 Sobic004G344600--Sobic004G128900 Sobic004G344600--Sobic009G246400 Sobic009G246400--Sobic002G161400 Sobic009G246400--Sobic004G344600 Sobic009G246400--Sobic003G304300 Sobic009G246400--Sobic003G339200 Sobic009G246400--Sobic004G128900 Sobic009G246400--Sobic001G112900 Sobic009G246400--Sobic006G191500 Sobic010G113200 Sobic010G113200 Sobic009G246400--Sobic010G113200 Sobic010G100900 Sobic010G100900 Sobic009G246400--Sobic010G100900 Sobic010G178401--Sobic003G080300 Sobic010G178000 Sobic010G178000 Sobic010G178401--Sobic010G178000 Sobic005G211600 Sobic005G211600 Sobic010G178401--Sobic005G211600 Sobic010G178401--Sobic010G100900 Sobic007G016600 Sobic007G016600 Sobic010G178401--Sobic007G016600 Sobic010G207100 Sobic010G207100 Sobic010G178401--Sobic010G207100 Sobic010G178401--Sobic004G223400 Sobic006G177900 Sobic006G177900 Sobic010G178401--Sobic006G177900 Sobic010G178401--Sobic009G259100 Sobic005G223600 Sobic005G223600 Sobic005G208200--Sobic005G223600 Sobic005G208200--Sobic003G080300 Sobic008G012100 Sobic008G012100 Sobic005G208200--Sobic008G012100 Sobic005G205200 Sobic005G205200 Sobic005G208200--Sobic005G205200 Sobic005G223925 Sobic005G223925 Sobic005G208200--Sobic005G223925 Sobic005G073800 Sobic005G073800 Sobic005G208200--Sobic005G073800 Sobic010G208750 Sobic010G208750 Sobic005G208200--Sobic010G208750 Sobic007G006200 Sobic007G006200 Sobic005G208200--Sobic007G006200 Sobic005G208200--Sobic004G344600 Sobic002G275100 Sobic002G275100 Sobic009G259100--Sobic002G275100 Sobic003G380200 Sobic003G380200 Sobic009G259100--Sobic003G380200 Sobic009G259100--Sobic004G344600 Sobic004G267700 Sobic004G267700 Sobic009G259100--Sobic004G267700 Sobic009G259100--Sobic010G100900 Sobic009G259100--Sobic003G304300 Sobic007G121300 Sobic007G121300 Sobic009G259100--Sobic007G121300 Sobic002G351200 Sobic002G351200 Sobic009G259100--Sobic002G351200 Sobic009G259100--Sobic002G161400 Sobic002G161400--Sobic006G191500 Sobic002G161400--Sobic004G344600 Sobic002G161400--Sobic004G128900 Sobic002G161400--Sobic003G304300 Sobic002G161400--Sobic001G485100 Sobic004G153900 Sobic004G153900 Sobic002G161400--Sobic004G153900 Sobic002G161400--Sobic003G339200 Sobic002G161400--Sobic003G380200 Sobic002G161400--Sobic001G112900 Sobic001G112900--Sobic003G339200 Sobic001G112900--Sobic004G344600 Sobic001G112900--Sobic003G304300 Sobic001G112900--Sobic002G161400 Sobic001G112900--Sobic010G113200 Sobic005G002400 Sobic005G002400 Sobic001G112900--Sobic005G002400 Sobic001G112900--Sobic006G191500 Sobic003G162400 Sobic003G162400 Sobic001G112900--Sobic003G162400 Sobic001G112900--Sobic010G104700 Sobic010G138800 Sobic010G138800 Sobic004G223400--Sobic010G138800 Sobic004G223400--Sobic003G080300 Sobic002G030900 Sobic002G030900 Sobic004G223400--Sobic002G030900 Sobic002G072500 Sobic002G072500 Sobic004G223400--Sobic002G072500 Sobic008G115700 Sobic008G115700 Sobic004G223400--Sobic008G115700 Sobic004G223400--Sobic010G100900 Sobic006G243800 Sobic006G243800 Sobic004G223400--Sobic006G243800 Sobic003G295300 Sobic003G295300 Sobic004G223400--Sobic003G295300 Sobic001G434000 Sobic001G434000 Sobic004G223400--Sobic001G434000 Sobic004G035100 Sobic004G035100 Sobic003G340300--Sobic004G035100 Sobic003G340300--Sobic004G344600 Sobic003G340300--Sobic002G161400 Sobic003G340300--Sobic004G128900 Sobic003G340300--Sobic003G339200 Sobic003G340300--Sobic007G121300 Sobic003G340300--Sobic009G246400 Sobic007G065600 Sobic007G065600 Sobic003G340300--Sobic007G065600 Sobic003G340300--Sobic006G191500
Octagon: transcription factors


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