Gene annotation
Transcriptome id Sobic.005G208200.1
Synonym Sb05g026187
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
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UniProt A0A1B6PTT5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.005G208200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G223600 stripe rust resistance protein Yr10, putative, expressed -
2 Sobic.003G080300 expressed protein -
3 Sobic.008G012100 csAtPR5, putative, expressed -
4 Sobic.005G205200 - -
5 Sobic.005G223925 - -
6 Sobic.005G073800 OsFBX411 - F-box domain containing protein, expressed -
7 Sobic.010G208750 - K02887: RP-L20, MRPL20, large subunit ribosomal protein L20
8 Sobic.007G006200 NBS-LRR disease resistance protein, putative, expressed -
9 Sobic.004G344600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
10 Sobic.003G340300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nodulin, putative, expressed -
11 Sobic.002G161400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
12 Sobic.006G235300 expressed protein -
13 Sobic.008G012150 - -
14 Sobic.010G178401 - -
15 Sobic.007G065600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carotenoid synthesis regulator CarF, putative, expressed K10704: ubiquitin-conjugating enzyme E2 variant
16 Sobic.003G339200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.009G259100 CCT motif family protein, expressed -
18 Sobic.001G112900 expressed protein -
19 Sobic.002G052100 early light-induced protein, chloroplast precursor, putative, expressed -
20 Sobic.005G217000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os11bglu36 SFR2 homologue, expressed -


Gene co-expression network
sample Sobic005G208200 Sobic005G208200 Sobic005G223600 Sobic005G223600 Sobic005G208200--Sobic005G223600 Sobic003G080300 Sobic003G080300 Sobic005G208200--Sobic003G080300 Sobic008G012100 Sobic008G012100 Sobic005G208200--Sobic008G012100 Sobic005G205200 Sobic005G205200 Sobic005G208200--Sobic005G205200 Sobic005G223925 Sobic005G223925 Sobic005G208200--Sobic005G223925 Sobic005G073800 Sobic005G073800 Sobic005G208200--Sobic005G073800 Sobic010G208750 Sobic010G208750 Sobic005G208200--Sobic010G208750 Sobic007G006200 Sobic007G006200 Sobic005G208200--Sobic007G006200 Sobic004G344600 Sobic004G344600 Sobic005G208200--Sobic004G344600 Sobic005G223600--Sobic005G223925 Sobic005G223600--Sobic005G208200 Sobic005G221900 Sobic005G221900 Sobic005G223600--Sobic005G221900 Sobic005G223600--Sobic005G205200 Sobic010G024200 Sobic010G024200 Sobic005G223600--Sobic010G024200 Sobic005G223600--Sobic008G012100 Sobic007G005900 Sobic007G005900 Sobic005G223600--Sobic007G005900 Sobic008G003800 Sobic008G003800 Sobic005G223600--Sobic008G003800 Sobic005G223600--Sobic010G208750 Sobic003G080300--Sobic004G344600 Sobic009G246400 Sobic009G246400 Sobic003G080300--Sobic009G246400 Sobic010G178401 Sobic010G178401 Sobic003G080300--Sobic010G178401 Sobic003G080300--Sobic005G208200 Sobic009G259100 Sobic009G259100 Sobic003G080300--Sobic009G259100 Sobic002G161400 Sobic002G161400 Sobic003G080300--Sobic002G161400 Sobic001G112900 Sobic001G112900 Sobic003G080300--Sobic001G112900 Sobic004G223400 Sobic004G223400 Sobic003G080300--Sobic004G223400 Sobic003G340300 Sobic003G340300 Sobic003G080300--Sobic003G340300 Sobic008G012150 Sobic008G012150 Sobic008G012100--Sobic008G012150 Sobic007G163433 Sobic007G163433 Sobic008G012100--Sobic007G163433 Sobic002G021900 Sobic002G021900 Sobic008G012100--Sobic002G021900 Sobic003G340350 Sobic003G340350 Sobic008G012100--Sobic003G340350 Sobic004G206800 Sobic004G206800 Sobic008G012100--Sobic004G206800 Sobic008G012100--Sobic010G208750 Sobic002G109200 Sobic002G109200 Sobic008G012100--Sobic002G109200 Sobic002G052100 Sobic002G052100 Sobic008G012100--Sobic002G052100 Sobic008G012100--Sobic005G208200 Sobic005G205200--Sobic005G208200 Sobic005G205200--Sobic005G223600 Sobic005G205200--Sobic005G223925 Sobic005G205200--Sobic010G024200 Sobic005G205200--Sobic005G221900 Sobic005G205200--Sobic008G003800 Sobic006G036700 Sobic006G036700 Sobic005G205200--Sobic006G036700 Sobic003G348000 Sobic003G348000 Sobic005G205200--Sobic003G348000 Sobic010G060800 Sobic010G060800 Sobic005G205200--Sobic010G060800 Sobic005G223925--Sobic005G223600 Sobic005G223925--Sobic005G221900 Sobic005G223925--Sobic005G208200 Sobic005G223925--Sobic005G205200 Sobic005G223925--Sobic010G024200 Sobic005G223925--Sobic008G003800 Sobic005G223925--Sobic007G005900 Sobic005G223925--Sobic008G012100 Sobic008G010000 Sobic008G010000 Sobic005G223925--Sobic008G010000 Sobic005G073800--Sobic005G208200 Sobic005G073800--Sobic003G080300 Sobic009G180550 Sobic009G180550 Sobic005G073800--Sobic009G180550 Sobic005G073800--Sobic008G012100 Sobic005G073800--Sobic004G223400 Sobic005G073800--Sobic010G208750 Sobic005G073800--Sobic008G012150 Sobic005G073800--Sobic002G021900 Sobic005G167000 Sobic005G167000 Sobic005G073800--Sobic005G167000 Sobic010G208750--Sobic008G012100 Sobic010G208750--Sobic002G021900 Sobic010G208750--Sobic007G163433 Sobic010G208750--Sobic003G340350 Sobic010G208750--Sobic004G206800 Sobic010G208750--Sobic008G012150 Sobic010G208750--Sobic002G109200 Sobic010G208750--Sobic005G208200 Sobic010G208750--Sobic002G052100 Sobic006G191500 Sobic006G191500 Sobic007G006200--Sobic006G191500 Sobic007G006200--Sobic002G161400 Sobic004G127800 Sobic004G127800 Sobic007G006200--Sobic004G127800 Sobic010G223200 Sobic010G223200 Sobic007G006200--Sobic010G223200 Sobic006G235300 Sobic006G235300 Sobic007G006200--Sobic006G235300 Sobic003G380200 Sobic003G380200 Sobic007G006200--Sobic003G380200 Sobic006G090100 Sobic006G090100 Sobic007G006200--Sobic006G090100 Sobic001G077300 Sobic001G077300 Sobic007G006200--Sobic001G077300 Sobic002G119100 Sobic002G119100 Sobic007G006200--Sobic002G119100 Sobic004G344600--Sobic002G161400 Sobic004G344600--Sobic001G112900 Sobic003G339200 Sobic003G339200 Sobic004G344600--Sobic003G339200 Sobic003G304300 Sobic003G304300 Sobic004G344600--Sobic003G304300 Sobic004G344600--Sobic006G191500 Sobic010G104700 Sobic010G104700 Sobic004G344600--Sobic010G104700 Sobic001G485100 Sobic001G485100 Sobic004G344600--Sobic001G485100 Sobic004G128900 Sobic004G128900 Sobic004G344600--Sobic004G128900 Sobic004G344600--Sobic009G246400
Octagon: transcription factors


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