Gene annotation
Transcriptome id Sobic.004G235750.1
Synonym -
Functional annotation -
UniProt A0A1Z5RNY5
Pfam PF08569
Panther DB PTHR10182 PTHR10182:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47540 : Mo25 family protein
RAP-DB (Rice) LOC_Os03g07600.1 : calcium-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a000867
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G235801 - K08272: CAB39, calcium binding protein 39
2 Sobic.002G044700 SAM dependent carboxyl methyltransferase, putative, expressed -
3 Sobic.010G126200 - -
4 Sobic.002G071350 - -
5 Sobic.002G071350 - -
6 Sobic.002G071350 - -
7 Sobic.002G071350 - -
8 Sobic.006G276100 protein kinase family protein, putative, expressed -
9 Sobic.006G025600 - -
10 Sobic.010G045100 -(PubMedID : 21930910)@-(PubMedID : 24884377)@osFTL2 FT-Like2 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
11 Sobic.002G190200 ZOS9-05 - C2H2 zinc finger protein, expressed -
12 Sobic.007G043100 cycloartenol synthase, putative, expressed -
13 Sobic.001G250000 - -
14 Sobic.002G428501 - -
15 Sobic.001G126400 - K13179: DDX18, ATP-dependent RNA helicase DDX18/HAS1
16 Sobic.007G149700 TKL_IRAK_DUF26-lh.11 - DUF26 kinases have homology to DUF26 containing loci, expressed -
17 Sobic.004G089200 ABC transporter, ATP-binding protein, putative, expressed -
18 Sobic.006G177900 - -
19 Sobic.004G089300 ABC transporter, ATP-binding protein, putative, expressed -
20 Sobic.008G157100 "BZIP transcription factor family protein, predicted target of novel-mir-617 expressed in the stems of sweet sorghum"(PubMedID : 26117170)@down-regulated TF in developmental senescence(PubMedID : 27586543)@bZIP transcription factor domain containing protein, expressed -


Gene co-expression network
sample Sobic004G235750 Sobic004G235750 Sobic004G235801 Sobic004G235801 Sobic004G235750--Sobic004G235801 Sobic002G044700 Sobic002G044700 Sobic004G235750--Sobic002G044700 Sobic010G126200 Sobic010G126200 Sobic004G235750--Sobic010G126200 Sobic002G071350 Sobic002G071350 Sobic004G235750--Sobic002G071350 Sobic006G276100 Sobic006G276100 Sobic004G235750--Sobic006G276100 Sobic006G025600 Sobic006G025600 Sobic004G235750--Sobic006G025600 Sobic004G235801--Sobic004G235750 Sobic004G235801--Sobic002G071350 Sobic004G235801--Sobic010G126200 Sobic004G235801--Sobic002G044700 Sobic007G043100 Sobic007G043100 Sobic004G235801--Sobic007G043100 Sobic002G190200 Sobic002G190200 Sobic004G235801--Sobic002G190200 Sobic002G044700--Sobic006G025600 Sobic010G045100 Sobic010G045100 Sobic002G044700--Sobic010G045100 Sobic001G250000 Sobic001G250000 Sobic002G044700--Sobic001G250000 Sobic006G177900 Sobic006G177900 Sobic002G044700--Sobic006G177900 Sobic002G044700--Sobic010G126200 Sobic002G044700--Sobic006G276100 Sobic004G089200 Sobic004G089200 Sobic002G044700--Sobic004G089200 Sobic007G149700 Sobic007G149700 Sobic002G044700--Sobic007G149700 Sobic002G044700--Sobic004G235750 Sobic010G126200--Sobic002G071350 Sobic010G126200--Sobic002G044700 Sobic010G126200--Sobic007G043100 Sobic002G428501 Sobic002G428501 Sobic010G126200--Sobic002G428501 Sobic010G126200--Sobic002G190200 Sobic010G126200--Sobic006G025600 Sobic002G071350--Sobic002G071350 Sobic002G071350--Sobic010G126200 Sobic002G071350--Sobic002G428501 Sobic002G071350--Sobic007G043100 Sobic002G071350--Sobic002G190200 Sobic001G283900 Sobic001G283900 Sobic002G071350--Sobic001G283900 Sobic001G130800 Sobic001G130800 Sobic002G071350--Sobic001G130800 Sobic006G276100--Sobic006G025600 Sobic006G276100--Sobic002G044700 Sobic006G276100--Sobic006G177900 Sobic006G276100--Sobic004G089200 Sobic006G276100--Sobic001G250000 Sobic004G252500 Sobic004G252500 Sobic006G276100--Sobic004G252500 Sobic003G108900 Sobic003G108900 Sobic006G276100--Sobic003G108900 Sobic002G173100 Sobic002G173100 Sobic006G276100--Sobic002G173100 Sobic003G190000 Sobic003G190000 Sobic006G276100--Sobic003G190000 Sobic006G025600--Sobic002G044700 Sobic006G025600--Sobic004G089200 Sobic006G025600--Sobic006G276100 Sobic006G025600--Sobic001G250000 Sobic006G025500 Sobic006G025500 Sobic006G025600--Sobic006G025500 Sobic006G025600--Sobic006G177900 Sobic006G025600--Sobic004G252500 Sobic006G025600--Sobic010G126200 Sobic006G025600--Sobic007G149700
Octagon: transcription factors


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