Gene annotation
| Transcriptome id | Sobic.002G190200.1 |
|---|---|
| Synonym | |
| Functional annotation | ZOS9-05 - C2H2 zinc finger protein, expressed |
| UniProt | A0A1B6QCC5 |
| Pfam | PF02892 |
| Panther DB | PTHR23272 PTHR23272:SF38 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0003677; DNA binding |
Orthologs (automatic annotation)
| TAIR | AT3G42170 : BED zinc finger ;hAT family dimerisation domain |
|---|---|
| RAP-DB (Rice) | LOC_Os09g21420.1 : transposon protein, putative, unclassified, expressed |
| MaizeGDB (Corn) | - |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.002G071350 | - | - |
| 2 | Sobic.002G071350 | - | - |
| 3 | Sobic.002G071350 | - | - |
| 4 | Sobic.002G071350 | - | - |
| 5 | Sobic.010G126200 | - | - |
| 6 | Sobic.002G428501 | - | - |
| 7 | Sobic.007G043100 | cycloartenol synthase, putative, expressed | - |
| 8 | Sobic.002G059932 | - | - |
| 9 | Sobic.001G283900 | CAMK_CAMK_like.27 - CAMK includes calcium/calmodulin depedent protein kinases, expressed | - |
| 10 | Sobic.002G044700 | SAM dependent carboxyl methyltransferase, putative, expressed | - |
| 11 | Sobic.001G130800 | PB1 domain containing protein, expressed | - |
| 12 | Sobic.004G235750 | - | - |
| 13 | Sobic.006G008650 | - | - |
| 14 | Sobic.004G235801 | - | K08272: CAB39, calcium binding protein 39 |
| 15 | Sobic.001G337701 | - | - |
| 16 | Sobic.005G103200 | - | - |
| 17 | Sobic.006G276100 | protein kinase family protein, putative, expressed | - |
| 18 | Sobic.005G156400 | phytosulfokine receptor precursor, putative, expressed | - |
| 19 | Sobic.006G025600 | - | - |
| 20 | Sobic.007G149700 | TKL_IRAK_DUF26-lh.11 - DUF26 kinases have homology to DUF26 containing loci, expressed | - |
Gene co-expression network
Octagon: transcription factors
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