Gene annotation
Transcriptome id Sobic.007G043100.1
Synonym CAS1
Functional annotation cycloartenol synthase, putative, expressed
UniProt C5YGW6
Pfam PF00432
Panther DB PTHR11764 PTHR11764:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT2G07050 : cycloartenol synthase 1
RAP-DB (Rice) LOC_Os11g18194.1 : cycloartenol synthase, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK14662
Barley -
Wheat TraesCS4A02G498200 , TraesCS4A02G498200 , TraesCS4A02G498200 , TraesCS4A02G498200 , TraesCS4A02G498200 , TraesCS7D02G233100 , TraesCS7D02G233100 , TraesCS7D02G233100 , TraesCS7D02G173600 , TraesCS4B02G390900 , TraesCS7A02G001700 , TraesCS4B02G390800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G071350 - -
2 Sobic.002G071350 - -
3 Sobic.002G071350 - -
4 Sobic.002G071350 - -
5 Sobic.010G126200 - -
6 Sobic.002G428501 - -
7 Sobic.002G190200 ZOS9-05 - C2H2 zinc finger protein, expressed -
8 Sobic.001G283900 CAMK_CAMK_like.27 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
9 Sobic.002G044700 SAM dependent carboxyl methyltransferase, putative, expressed -
10 Sobic.001G130800 PB1 domain containing protein, expressed -
11 Sobic.006G025600 - -
12 Sobic.006G008650 - -
13 Sobic.004G235750 - -
14 Sobic.005G210200 TKL_IRAK_DUF26-lh.6 - DUF26 kinases have homology to DUF26 containing loci, expressed K04730: interleukin-1 receptor-associated kinase 1
15 Sobic.002G059932 - -
16 Sobic.006G276100 protein kinase family protein, putative, expressed -
17 Sobic.001G337701 - -
18 Sobic.004G235801 - K08272: CAB39, calcium binding protein 39
19 Sobic.005G103200 - -
20 Sobic.004G089200 ABC transporter, ATP-binding protein, putative, expressed -


Gene co-expression network
sample Sobic007G043100 Sobic007G043100 Sobic002G071350 Sobic002G071350 Sobic007G043100--Sobic002G071350 Sobic010G126200 Sobic010G126200 Sobic007G043100--Sobic010G126200 Sobic002G428501 Sobic002G428501 Sobic007G043100--Sobic002G428501 Sobic002G190200 Sobic002G190200 Sobic007G043100--Sobic002G190200 Sobic001G283900 Sobic001G283900 Sobic007G043100--Sobic001G283900 Sobic002G044700 Sobic002G044700 Sobic007G043100--Sobic002G044700 Sobic002G071350--Sobic002G071350 Sobic002G071350--Sobic010G126200 Sobic002G071350--Sobic002G428501 Sobic002G071350--Sobic007G043100 Sobic002G071350--Sobic002G190200 Sobic002G071350--Sobic001G283900 Sobic001G130800 Sobic001G130800 Sobic002G071350--Sobic001G130800 Sobic010G126200--Sobic002G071350 Sobic010G126200--Sobic002G044700 Sobic010G126200--Sobic007G043100 Sobic010G126200--Sobic002G428501 Sobic010G126200--Sobic002G190200 Sobic006G025600 Sobic006G025600 Sobic010G126200--Sobic006G025600 Sobic002G428501--Sobic001G130800 Sobic002G428501--Sobic002G071350 Sobic002G428501--Sobic010G126200 Sobic002G428501--Sobic007G043100 Sobic002G428501--Sobic002G190200 Sobic002G428501--Sobic001G283900 Sobic002G190200--Sobic002G071350 Sobic002G190200--Sobic010G126200 Sobic002G190200--Sobic002G428501 Sobic002G190200--Sobic007G043100 Sobic002G059932 Sobic002G059932 Sobic002G190200--Sobic002G059932 Sobic002G190200--Sobic001G283900 Sobic001G283900--Sobic002G071350 Sobic001G283900--Sobic002G428501 Sobic001G283900--Sobic007G043100 Sobic001G283900--Sobic010G126200 Sobic001G283900--Sobic002G190200 Sobic001G283900--Sobic001G130800 Sobic002G044700--Sobic006G025600 Sobic010G045100 Sobic010G045100 Sobic002G044700--Sobic010G045100 Sobic001G250000 Sobic001G250000 Sobic002G044700--Sobic001G250000 Sobic006G177900 Sobic006G177900 Sobic002G044700--Sobic006G177900 Sobic002G044700--Sobic010G126200 Sobic006G276100 Sobic006G276100 Sobic002G044700--Sobic006G276100 Sobic004G089200 Sobic004G089200 Sobic002G044700--Sobic004G089200 Sobic007G149700 Sobic007G149700 Sobic002G044700--Sobic007G149700 Sobic004G235750 Sobic004G235750 Sobic002G044700--Sobic004G235750
Octagon: transcription factors


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