Gene annotation
Transcriptome id Sobic.004G235801.1
Synonym -
Functional annotation -
UniProt C6JSI0 , A0A109NDT0
Pfam PF08569
Panther DB PTHR10182 PTHR10182:SF16
NCBI CDD KOG1566; Conserved protein Mo25
KEGG Orthology K08272; CAB39, calcium binding protein 39
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47540 : Mo25 family protein
RAP-DB (Rice) LOC_Os03g07600.1 : calcium-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a000867
Brachypodium KQK23393 , PNT78077
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G235750 - -
2 Sobic.002G071350 - -
3 Sobic.002G071350 - -
4 Sobic.002G071350 - -
5 Sobic.002G071350 - -
6 Sobic.010G126200 - -
7 Sobic.002G044700 SAM dependent carboxyl methyltransferase, putative, expressed -
8 Sobic.007G043100 cycloartenol synthase, putative, expressed -
9 Sobic.002G190200 ZOS9-05 - C2H2 zinc finger protein, expressed -
10 Sobic.002G428501 - -
11 Sobic.004G089300 ABC transporter, ATP-binding protein, putative, expressed -
12 Sobic.006G276100 protein kinase family protein, putative, expressed -
13 Sobic.001G126400 - K13179: DDX18, ATP-dependent RNA helicase DDX18/HAS1
14 Sobic.006G025600 - -
15 Sobic.010G045100 -(PubMedID : 21930910)@-(PubMedID : 24884377)@osFTL2 FT-Like2 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
16 Sobic.007G149700 TKL_IRAK_DUF26-lh.11 - DUF26 kinases have homology to DUF26 containing loci, expressed -
17 Sobic.001G283900 CAMK_CAMK_like.27 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
18 Sobic.001G250000 - -
19 Sobic.004G089200 ABC transporter, ATP-binding protein, putative, expressed -
20 Sobic.001G130800 PB1 domain containing protein, expressed -


Gene co-expression network
sample Sobic004G235801 Sobic004G235801 Sobic004G235750 Sobic004G235750 Sobic004G235801--Sobic004G235750 Sobic002G071350 Sobic002G071350 Sobic004G235801--Sobic002G071350 Sobic010G126200 Sobic010G126200 Sobic004G235801--Sobic010G126200 Sobic002G044700 Sobic002G044700 Sobic004G235801--Sobic002G044700 Sobic007G043100 Sobic007G043100 Sobic004G235801--Sobic007G043100 Sobic002G190200 Sobic002G190200 Sobic004G235801--Sobic002G190200 Sobic004G235750--Sobic004G235801 Sobic004G235750--Sobic002G044700 Sobic004G235750--Sobic010G126200 Sobic004G235750--Sobic002G071350 Sobic006G276100 Sobic006G276100 Sobic004G235750--Sobic006G276100 Sobic006G025600 Sobic006G025600 Sobic004G235750--Sobic006G025600 Sobic002G071350--Sobic002G071350 Sobic002G071350--Sobic010G126200 Sobic002G428501 Sobic002G428501 Sobic002G071350--Sobic002G428501 Sobic002G071350--Sobic007G043100 Sobic002G071350--Sobic002G190200 Sobic001G283900 Sobic001G283900 Sobic002G071350--Sobic001G283900 Sobic001G130800 Sobic001G130800 Sobic002G071350--Sobic001G130800 Sobic010G126200--Sobic002G071350 Sobic010G126200--Sobic002G044700 Sobic010G126200--Sobic007G043100 Sobic010G126200--Sobic002G428501 Sobic010G126200--Sobic002G190200 Sobic010G126200--Sobic006G025600 Sobic002G044700--Sobic006G025600 Sobic010G045100 Sobic010G045100 Sobic002G044700--Sobic010G045100 Sobic001G250000 Sobic001G250000 Sobic002G044700--Sobic001G250000 Sobic006G177900 Sobic006G177900 Sobic002G044700--Sobic006G177900 Sobic002G044700--Sobic010G126200 Sobic002G044700--Sobic006G276100 Sobic004G089200 Sobic004G089200 Sobic002G044700--Sobic004G089200 Sobic007G149700 Sobic007G149700 Sobic002G044700--Sobic007G149700 Sobic002G044700--Sobic004G235750 Sobic007G043100--Sobic002G071350 Sobic007G043100--Sobic010G126200 Sobic007G043100--Sobic002G428501 Sobic007G043100--Sobic002G190200 Sobic007G043100--Sobic001G283900 Sobic007G043100--Sobic002G044700 Sobic002G190200--Sobic002G071350 Sobic002G190200--Sobic010G126200 Sobic002G190200--Sobic002G428501 Sobic002G190200--Sobic007G043100 Sobic002G059932 Sobic002G059932 Sobic002G190200--Sobic002G059932 Sobic002G190200--Sobic001G283900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.