Gene annotation
Transcriptome id Sobic.004G164400.1,Sobic.004G164400.2
Synonym Sb04g021600, CRL
Functional annotation expressed protein
UniProt A0A1Z5RNA0 , C5XTE1
Pfam PF06206
Panther DB PTHR35137 PTHR35137:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0017009; protein-phycocyanobilin linkage


Orthologs (automatic annotation)
TAIR AT5G51020 : crumpled leaf
RAP-DB (Rice) LOC_Os11g32160.1 : expressed protein
MaizeGDB (Corn) Zm00025a029828
Brachypodium KQJ88387
Barley HORVU4Hr1G041320.4 , HORVU4Hr1G041320.1 , HORVU4Hr1G041320.2 , HORVU4Hr1G041320.3
Wheat TraesCS4B02G157300 , TraesCS4A02G156900
Populus -


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cDNA sequences
Sobic.004G164400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G228500 coiled-coil domain-containing protein, putative, expressed K13115: coiled-coil domain-containing protein 130
2 Sobic.007G108500 lipid phosphatase protein, putative, expressed K18693: DPP1, DPPL, diacylglycerol diphosphate phosphatase / phosphatidate phosphatase
3 Sobic.004G174400 ZOS2-09 - C2H2 zinc finger protein, expressed -
4 Sobic.002G006600 -(PubMedID : 26976818)@aminotransferase, classes I and II, domain containing protein, expressed K14272: glutamate--glyoxylate aminotransferase
5 Sobic.002G104100 FYVE zinc finger domain containing protein, expressed -
6 Sobic.006G105400 expressed protein -
7 Sobic.001G318432 - -
8 Sobic.006G274600 exo70 exocyst complex subunit, putative, expressed K07195: EXOC7, exocyst complex component 7
9 Sobic.001G126100 OsFBO16 - F-box and other domain containing protein, expressed -
10 Sobic.001G375700 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
11 Sobic.010G243900 OsFBO9 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
12 Sobic.003G029700 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
13 Sobic.010G149200 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
14 Sobic.001G198100 PAP fibrillin family domain containing protein, expressed -
15 Sobic.004G121100 expressed protein -
16 Sobic.004G258700 PHD-finger family protein, expressed -
17 Sobic.010G176550 - -
18 Sobic.001G298600 ribosomal L18p/L5e family protein, expressed -
19 Sobic.001G107500 cyclin-dependent kinase, putative, expressed K08819: cyclin-dependent kinase 12/13
20 Sobic.001G214300 expressed protein -


Gene co-expression network
sample Sobic004G164400 Sobic004G164400 Sobic006G228500 Sobic006G228500 Sobic004G164400--Sobic006G228500 Sobic007G108500 Sobic007G108500 Sobic004G164400--Sobic007G108500 Sobic004G174400 Sobic004G174400 Sobic004G164400--Sobic004G174400 Sobic002G006600 Sobic002G006600 Sobic004G164400--Sobic002G006600 Sobic002G104100 Sobic002G104100 Sobic004G164400--Sobic002G104100 Sobic006G105400 Sobic006G105400 Sobic004G164400--Sobic006G105400 Sobic001G318432 Sobic001G318432 Sobic004G164400--Sobic001G318432 Sobic006G274600 Sobic006G274600 Sobic004G164400--Sobic006G274600 Sobic001G126100 Sobic001G126100 Sobic004G164400--Sobic001G126100 Sobic006G228500--Sobic004G164400 Sobic004G121100 Sobic004G121100 Sobic006G228500--Sobic004G121100 Sobic006G228500--Sobic007G108500 Sobic006G228500--Sobic001G318432 Sobic001G107500 Sobic001G107500 Sobic006G228500--Sobic001G107500 Sobic001G298600 Sobic001G298600 Sobic006G228500--Sobic001G298600 Sobic010G056200 Sobic010G056200 Sobic006G228500--Sobic010G056200 Sobic009G065100 Sobic009G065100 Sobic006G228500--Sobic009G065100 Sobic002G031400 Sobic002G031400 Sobic006G228500--Sobic002G031400 Sobic007G108500--Sobic006G228500 Sobic007G108500--Sobic004G164400 Sobic007G108500--Sobic004G174400 Sobic007G108500--Sobic010G056200 Sobic004G083700 Sobic004G083700 Sobic007G108500--Sobic004G083700 Sobic007G108500--Sobic009G065100 Sobic007G108500--Sobic001G107500 Sobic009G215800 Sobic009G215800 Sobic007G108500--Sobic009G215800 Sobic001G375700 Sobic001G375700 Sobic007G108500--Sobic001G375700 Sobic004G174400--Sobic007G108500 Sobic004G174400--Sobic004G164400 Sobic004G174400--Sobic006G228500 Sobic007G136800 Sobic007G136800 Sobic004G174400--Sobic007G136800 Sobic004G174400--Sobic001G375700 Sobic001G035900 Sobic001G035900 Sobic004G174400--Sobic001G035900 Sobic004G174400--Sobic002G031400 Sobic010G176550 Sobic010G176550 Sobic004G174400--Sobic010G176550 Sobic010G005600 Sobic010G005600 Sobic004G174400--Sobic010G005600 Sobic003G017100 Sobic003G017100 Sobic002G006600--Sobic003G017100 Sobic001G198100 Sobic001G198100 Sobic002G006600--Sobic001G198100 Sobic010G002700 Sobic010G002700 Sobic002G006600--Sobic010G002700 Sobic001G169900 Sobic001G169900 Sobic002G006600--Sobic001G169900 Sobic003G429650 Sobic003G429650 Sobic002G006600--Sobic003G429650 Sobic002G006600--Sobic004G164400 Sobic006G182900 Sobic006G182900 Sobic002G006600--Sobic006G182900 Sobic009G209300 Sobic009G209300 Sobic002G006600--Sobic009G209300 Sobic002G006600--Sobic006G105400 Sobic004G181600 Sobic004G181600 Sobic002G104100--Sobic004G181600 Sobic006G133900 Sobic006G133900 Sobic002G104100--Sobic006G133900 Sobic006G065600 Sobic006G065600 Sobic002G104100--Sobic006G065600 Sobic002G104100--Sobic004G164400 Sobic003G370700 Sobic003G370700 Sobic002G104100--Sobic003G370700 Sobic002G104100--Sobic001G169900 Sobic010G248700 Sobic010G248700 Sobic002G104100--Sobic010G248700 Sobic001G365900 Sobic001G365900 Sobic002G104100--Sobic001G365900 Sobic002G104100--Sobic006G182900 Sobic001G214300 Sobic001G214300 Sobic006G105400--Sobic001G214300 Sobic006G048600 Sobic006G048600 Sobic006G105400--Sobic006G048600 Sobic006G048500 Sobic006G048500 Sobic006G105400--Sobic006G048500 Sobic006G105400--Sobic006G182900 Sobic004G007100 Sobic004G007100 Sobic006G105400--Sobic004G007100 Sobic007G161000 Sobic007G161000 Sobic006G105400--Sobic007G161000 Sobic006G105400--Sobic001G365900 Sobic010G255700 Sobic010G255700 Sobic006G105400--Sobic010G255700 Sobic004G341900 Sobic004G341900 Sobic006G105400--Sobic004G341900 Sobic001G318432--Sobic001G214300 Sobic001G318432--Sobic006G048600 Sobic003G029700 Sobic003G029700 Sobic001G318432--Sobic003G029700 Sobic001G318432--Sobic006G228500 Sobic001G318432--Sobic004G341900 Sobic001G318432--Sobic006G048500 Sobic001G318432--Sobic003G429650 Sobic002G006900 Sobic002G006900 Sobic001G318432--Sobic002G006900 Sobic001G318432--Sobic006G182900 Sobic008G067600 Sobic008G067600 Sobic006G274600--Sobic008G067600 Sobic006G274600--Sobic009G065100 Sobic006G274600--Sobic004G164400 Sobic006G274600--Sobic010G255700 Sobic004G039200 Sobic004G039200 Sobic006G274600--Sobic004G039200 Sobic004G084300 Sobic004G084300 Sobic006G274600--Sobic004G084300 Sobic006G274600--Sobic007G161000 Sobic006G274600--Sobic006G105400 Sobic002G320500 Sobic002G320500 Sobic006G274600--Sobic002G320500 Sobic010G149200 Sobic010G149200 Sobic001G126100--Sobic010G149200 Sobic001G126100--Sobic004G164400 Sobic003G221900 Sobic003G221900 Sobic001G126100--Sobic003G221900 Sobic001G126100--Sobic002G104100 Sobic001G126100--Sobic001G169900 Sobic001G297500 Sobic001G297500 Sobic001G126100--Sobic001G297500 Sobic010G243900 Sobic010G243900 Sobic001G126100--Sobic010G243900 Sobic004G042200 Sobic004G042200 Sobic001G126100--Sobic004G042200 Sobic001G126100--Sobic006G105400
Octagon: transcription factors


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