Gene annotation
Transcriptome id Sobic.010G149200.1
Synonym Sb10g020020
Functional annotation CAAX amino terminal protease family protein, putative, expressed
UniProt C5Z3I5
Pfam PF02517
Panther DB PTHR10794 PTHR10794:SF58
NCBI CDD -
KEGG Orthology K07052; uncharacterized protein
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT5G60750 : CAAX amino terminal protease family protein
RAP-DB (Rice) LOC_Os06g30910.1 : CAAX amino terminal protease family protein, putative, expressed
MaizeGDB (Corn) Zm00025a004753
Brachypodium KQK18229
Barley HORVU7Hr1G112300.2 , HORVU7Hr1G112300.3 , HORVU7Hr1G112300.1 , HORVU6Hr1G020400.2 , HORVU6Hr1G020400.3 , HORVU6Hr1G020400.1
Wheat TraesCS6B02G141500 , TraesCS7D02G336100 , TraesCS7B02G239600 , TraesCS7B02G239600 , TraesCS6A02G112700 , TraesCS7A02G343500 , TraesCS7A02G343500
Populus -


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cDNA sequences
Sobic.010G149200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G145200 expressed protein -
2 Sobic.010G243900 OsFBO9 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
3 Sobic.010G021500 WD domain, G-beta repeat domain containing protein, expressed -
4 Sobic.001G126100 OsFBO16 - F-box and other domain containing protein, expressed -
5 Sobic.004G164400 expressed protein -
6 Sobic.003G340600 VHS and GAT domain containing protein, expressed -
7 Sobic.004G042200 OsFBO8 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
8 Sobic.010G143800 expressed protein -
9 Sobic.003G221900 helix-loop-helix DNA-binding domain containing protein, expressed -
10 Sobic.007G023200 OsFBX178 - F-box domain containing protein, expressed -
11 Sobic.001G046200 - -
12 Sobic.001G191600 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
13 Sobic.003G398700 expressed protein K15210: snRNA-activating protein complex subunit 3
14 Sobic.003G355900 prenylated rab acceptor, putative, expressed -
15 Sobic.003G222900 OsFtsH9 FtsH protease, homologue of AtFtsH11, expressed K08955: ATP-dependent metalloprotease
16 Sobic.001G389100 DUF630/DUF632 domains containing protein, putative, expressed -
17 Sobic.006G105400 expressed protein -
18 Sobic.002G252800 OsFBX332 - F-box domain containing protein, expressed -
19 Sobic.003G217700 - -
20 Sobic.002G104100 FYVE zinc finger domain containing protein, expressed -


Gene co-expression network
sample Sobic010G149200 Sobic010G149200 Sobic006G145200 Sobic006G145200 Sobic010G149200--Sobic006G145200 Sobic010G243900 Sobic010G243900 Sobic010G149200--Sobic010G243900 Sobic010G021500 Sobic010G021500 Sobic010G149200--Sobic010G021500 Sobic001G126100 Sobic001G126100 Sobic010G149200--Sobic001G126100 Sobic004G164400 Sobic004G164400 Sobic010G149200--Sobic004G164400 Sobic003G340600 Sobic003G340600 Sobic010G149200--Sobic003G340600 Sobic004G042200 Sobic004G042200 Sobic010G149200--Sobic004G042200 Sobic010G143800 Sobic010G143800 Sobic010G149200--Sobic010G143800 Sobic003G221900 Sobic003G221900 Sobic010G149200--Sobic003G221900 Sobic006G145200--Sobic010G149200 Sobic006G145200--Sobic010G243900 Sobic002G064750 Sobic002G064750 Sobic006G145200--Sobic002G064750 Sobic006G145200--Sobic010G143800 Sobic007G023200 Sobic007G023200 Sobic006G145200--Sobic007G023200 Sobic001G035900 Sobic001G035900 Sobic006G145200--Sobic001G035900 Sobic001G191600 Sobic001G191600 Sobic006G145200--Sobic001G191600 Sobic006G145200--Sobic004G164400 Sobic001G198100 Sobic001G198100 Sobic006G145200--Sobic001G198100 Sobic001G046200 Sobic001G046200 Sobic010G243900--Sobic001G046200 Sobic010G243900--Sobic004G042200 Sobic010G243900--Sobic010G149200 Sobic001G161800 Sobic001G161800 Sobic010G243900--Sobic001G161800 Sobic003G398700 Sobic003G398700 Sobic010G243900--Sobic003G398700 Sobic008G113100 Sobic008G113100 Sobic010G243900--Sobic008G113100 Sobic010G243900--Sobic010G021500 Sobic002G029900 Sobic002G029900 Sobic010G243900--Sobic002G029900 Sobic002G042800 Sobic002G042800 Sobic010G243900--Sobic002G042800 Sobic010G021500--Sobic003G398700 Sobic010G167900 Sobic010G167900 Sobic010G021500--Sobic010G167900 Sobic010G021500--Sobic008G113100 Sobic006G096900 Sobic006G096900 Sobic010G021500--Sobic006G096900 Sobic001G456900 Sobic001G456900 Sobic010G021500--Sobic001G456900 Sobic010G021500--Sobic010G149200 Sobic005G027400 Sobic005G027400 Sobic010G021500--Sobic005G027400 Sobic005G100700 Sobic005G100700 Sobic010G021500--Sobic005G100700 Sobic010G021500--Sobic003G221900 Sobic001G126100--Sobic010G149200 Sobic001G126100--Sobic004G164400 Sobic001G126100--Sobic003G221900 Sobic002G104100 Sobic002G104100 Sobic001G126100--Sobic002G104100 Sobic001G169900 Sobic001G169900 Sobic001G126100--Sobic001G169900 Sobic001G297500 Sobic001G297500 Sobic001G126100--Sobic001G297500 Sobic001G126100--Sobic010G243900 Sobic001G126100--Sobic004G042200 Sobic006G105400 Sobic006G105400 Sobic001G126100--Sobic006G105400 Sobic006G228500 Sobic006G228500 Sobic004G164400--Sobic006G228500 Sobic007G108500 Sobic007G108500 Sobic004G164400--Sobic007G108500 Sobic004G174400 Sobic004G174400 Sobic004G164400--Sobic004G174400 Sobic002G006600 Sobic002G006600 Sobic004G164400--Sobic002G006600 Sobic004G164400--Sobic002G104100 Sobic004G164400--Sobic006G105400 Sobic001G318432 Sobic001G318432 Sobic004G164400--Sobic001G318432 Sobic006G274600 Sobic006G274600 Sobic004G164400--Sobic006G274600 Sobic004G164400--Sobic001G126100 Sobic008G172300 Sobic008G172300 Sobic003G340600--Sobic008G172300 Sobic003G340600--Sobic003G221900 Sobic002G167500 Sobic002G167500 Sobic003G340600--Sobic002G167500 Sobic010G092300 Sobic010G092300 Sobic003G340600--Sobic010G092300 Sobic003G340600--Sobic003G398700 Sobic009G162600 Sobic009G162600 Sobic003G340600--Sobic009G162600 Sobic004G181600 Sobic004G181600 Sobic003G340600--Sobic004G181600 Sobic010G013200 Sobic010G013200 Sobic003G340600--Sobic010G013200 Sobic006G086500 Sobic006G086500 Sobic003G340600--Sobic006G086500 Sobic009G038900 Sobic009G038900 Sobic004G042200--Sobic009G038900 Sobic010G002700 Sobic010G002700 Sobic004G042200--Sobic010G002700 Sobic003G191700 Sobic003G191700 Sobic004G042200--Sobic003G191700 Sobic006G050700 Sobic006G050700 Sobic004G042200--Sobic006G050700 Sobic003G220100 Sobic003G220100 Sobic004G042200--Sobic003G220100 Sobic003G155100 Sobic003G155100 Sobic004G042200--Sobic003G155100 Sobic004G042200--Sobic010G243900 Sobic005G106600 Sobic005G106600 Sobic004G042200--Sobic005G106600 Sobic006G133900 Sobic006G133900 Sobic004G042200--Sobic006G133900 Sobic010G143800--Sobic005G027400 Sobic001G081200 Sobic001G081200 Sobic010G143800--Sobic001G081200 Sobic007G161000 Sobic007G161000 Sobic010G143800--Sobic007G161000 Sobic004G006900 Sobic004G006900 Sobic010G143800--Sobic004G006900 Sobic001G529600 Sobic001G529600 Sobic010G143800--Sobic001G529600 Sobic001G365900 Sobic001G365900 Sobic010G143800--Sobic001G365900 Sobic002G294800 Sobic002G294800 Sobic010G143800--Sobic002G294800 Sobic010G143800--Sobic010G021500 Sobic010G143800--Sobic003G398700 Sobic001G122832 Sobic001G122832 Sobic003G221900--Sobic001G122832 Sobic003G316500 Sobic003G316500 Sobic003G221900--Sobic003G316500 Sobic003G221900--Sobic003G340600 Sobic001G389100 Sobic001G389100 Sobic003G221900--Sobic001G389100 Sobic003G221900--Sobic010G021500 Sobic003G221900--Sobic006G133900 Sobic010G147100 Sobic010G147100 Sobic003G221900--Sobic010G147100 Sobic001G332500 Sobic001G332500 Sobic003G221900--Sobic001G332500 Sobic003G029700 Sobic003G029700 Sobic003G221900--Sobic003G029700
Octagon: transcription factors


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