Gene annotation
Transcriptome id Sobic.006G145200.1
Synonym Sb06g022380
Functional annotation expressed protein
UniProt C5YC08
Pfam -
Panther DB PTHR35745 PTHR35745:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G13200 : -
RAP-DB (Rice) LOC_Os04g43350.1 : expressed protein
MaizeGDB (Corn) Zm00025a056495
Brachypodium KQJ83559
Barley -
Wheat TraesCS2D02G381400 , TraesCS2B02G401700
Populus -


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cDNA sequences
Sobic.006G145200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G149200 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
2 Sobic.010G243900 OsFBO9 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
3 Sobic.002G064750 - -
4 Sobic.010G143800 expressed protein -
5 Sobic.007G023200 OsFBX178 - F-box domain containing protein, expressed -
6 Sobic.001G035900 expressed protein K13156: U11/U12 small nuclear ribonucleoprotein 48 kDa protein
7 Sobic.001G191600 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
8 Sobic.004G164400 expressed protein -
9 Sobic.001G198100 PAP fibrillin family domain containing protein, expressed -
10 Sobic.006G065600 expressed protein -
11 Sobic.002G000600 glycosyl transferase, group 1 domain containing protein, expressed K06119: sulfoquinovosyltransferase
12 Sobic.004G174400 ZOS2-09 - C2H2 zinc finger protein, expressed -
13 Sobic.001G126100 OsFBO16 - F-box and other domain containing protein, expressed -
14 Sobic.004G034800 OsFBX440 - F-box domain containing protein, expressed -
15 Sobic.001G081200 TATA binding protein-associated factor, putative, expressed K03131: transcription initiation factor TFIID subunit 6
16 Sobic.010G021500 WD domain, G-beta repeat domain containing protein, expressed -
17 Sobic.004G178500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor 7, putative, expressed K14486: K14486, auxin response factor
18 Sobic.003G217700 - -
19 Sobic.001G079700 casein kinase II subunit alpha-2, putative, expressed K03097: casein kinase II subunit alpha
20 Sobic.010G176550 - -


Gene co-expression network
sample Sobic006G145200 Sobic006G145200 Sobic010G149200 Sobic010G149200 Sobic006G145200--Sobic010G149200 Sobic010G243900 Sobic010G243900 Sobic006G145200--Sobic010G243900 Sobic002G064750 Sobic002G064750 Sobic006G145200--Sobic002G064750 Sobic010G143800 Sobic010G143800 Sobic006G145200--Sobic010G143800 Sobic007G023200 Sobic007G023200 Sobic006G145200--Sobic007G023200 Sobic001G035900 Sobic001G035900 Sobic006G145200--Sobic001G035900 Sobic001G191600 Sobic001G191600 Sobic006G145200--Sobic001G191600 Sobic004G164400 Sobic004G164400 Sobic006G145200--Sobic004G164400 Sobic001G198100 Sobic001G198100 Sobic006G145200--Sobic001G198100 Sobic010G149200--Sobic006G145200 Sobic010G149200--Sobic010G243900 Sobic010G021500 Sobic010G021500 Sobic010G149200--Sobic010G021500 Sobic001G126100 Sobic001G126100 Sobic010G149200--Sobic001G126100 Sobic010G149200--Sobic004G164400 Sobic003G340600 Sobic003G340600 Sobic010G149200--Sobic003G340600 Sobic004G042200 Sobic004G042200 Sobic010G149200--Sobic004G042200 Sobic010G149200--Sobic010G143800 Sobic003G221900 Sobic003G221900 Sobic010G149200--Sobic003G221900 Sobic001G046200 Sobic001G046200 Sobic010G243900--Sobic001G046200 Sobic010G243900--Sobic004G042200 Sobic010G243900--Sobic010G149200 Sobic001G161800 Sobic001G161800 Sobic010G243900--Sobic001G161800 Sobic003G398700 Sobic003G398700 Sobic010G243900--Sobic003G398700 Sobic008G113100 Sobic008G113100 Sobic010G243900--Sobic008G113100 Sobic010G243900--Sobic010G021500 Sobic002G029900 Sobic002G029900 Sobic010G243900--Sobic002G029900 Sobic002G042800 Sobic002G042800 Sobic010G243900--Sobic002G042800 Sobic002G064750--Sobic001G035900 Sobic003G254000 Sobic003G254000 Sobic002G064750--Sobic003G254000 Sobic003G429650 Sobic003G429650 Sobic002G064750--Sobic003G429650 Sobic007G099100 Sobic007G099100 Sobic002G064750--Sobic007G099100 Sobic001G274200 Sobic001G274200 Sobic002G064750--Sobic001G274200 Sobic002G031400 Sobic002G031400 Sobic002G064750--Sobic002G031400 Sobic002G064750--Sobic006G145200 Sobic006G182900 Sobic006G182900 Sobic002G064750--Sobic006G182900 Sobic004G178500 Sobic004G178500 Sobic002G064750--Sobic004G178500 Sobic005G027400 Sobic005G027400 Sobic010G143800--Sobic005G027400 Sobic001G081200 Sobic001G081200 Sobic010G143800--Sobic001G081200 Sobic007G161000 Sobic007G161000 Sobic010G143800--Sobic007G161000 Sobic004G006900 Sobic004G006900 Sobic010G143800--Sobic004G006900 Sobic001G529600 Sobic001G529600 Sobic010G143800--Sobic001G529600 Sobic001G365900 Sobic001G365900 Sobic010G143800--Sobic001G365900 Sobic002G294800 Sobic002G294800 Sobic010G143800--Sobic002G294800 Sobic010G143800--Sobic010G021500 Sobic010G143800--Sobic003G398700 Sobic004G238200 Sobic004G238200 Sobic007G023200--Sobic004G238200 Sobic003G217700 Sobic003G217700 Sobic007G023200--Sobic003G217700 Sobic004G163800 Sobic004G163800 Sobic007G023200--Sobic004G163800 Sobic003G234900 Sobic003G234900 Sobic007G023200--Sobic003G234900 Sobic002G168300 Sobic002G168300 Sobic007G023200--Sobic002G168300 Sobic005G059800 Sobic005G059800 Sobic007G023200--Sobic005G059800 Sobic007G185700 Sobic007G185700 Sobic007G023200--Sobic007G185700 Sobic008G062400 Sobic008G062400 Sobic007G023200--Sobic008G062400 Sobic010G176550 Sobic010G176550 Sobic007G023200--Sobic010G176550 Sobic001G035900--Sobic003G254000 Sobic001G035900--Sobic002G031400 Sobic001G035900--Sobic002G064750 Sobic001G035900--Sobic007G099100 Sobic001G035900--Sobic001G274200 Sobic001G035900--Sobic003G429650 Sobic001G035900--Sobic010G176550 Sobic001G035900--Sobic007G161000 Sobic009G024000 Sobic009G024000 Sobic001G035900--Sobic009G024000 Sobic006G086500 Sobic006G086500 Sobic001G191600--Sobic006G086500 Sobic003G029700 Sobic003G029700 Sobic001G191600--Sobic003G029700 Sobic006G142775 Sobic006G142775 Sobic001G191600--Sobic006G142775 Sobic004G205800 Sobic004G205800 Sobic001G191600--Sobic004G205800 Sobic001G318432 Sobic001G318432 Sobic001G191600--Sobic001G318432 Sobic001G191600--Sobic001G365900 Sobic001G191600--Sobic002G294800 Sobic010G076300 Sobic010G076300 Sobic001G191600--Sobic010G076300 Sobic002G173000 Sobic002G173000 Sobic001G191600--Sobic002G173000 Sobic006G228500 Sobic006G228500 Sobic004G164400--Sobic006G228500 Sobic007G108500 Sobic007G108500 Sobic004G164400--Sobic007G108500 Sobic004G174400 Sobic004G174400 Sobic004G164400--Sobic004G174400 Sobic002G006600 Sobic002G006600 Sobic004G164400--Sobic002G006600 Sobic002G104100 Sobic002G104100 Sobic004G164400--Sobic002G104100 Sobic006G105400 Sobic006G105400 Sobic004G164400--Sobic006G105400 Sobic004G164400--Sobic001G318432 Sobic006G274600 Sobic006G274600 Sobic004G164400--Sobic006G274600 Sobic004G164400--Sobic001G126100 Sobic003G017100 Sobic003G017100 Sobic001G198100--Sobic003G017100 Sobic003G247400 Sobic003G247400 Sobic001G198100--Sobic003G247400 Sobic001G169900 Sobic001G169900 Sobic001G198100--Sobic001G169900 Sobic010G002700 Sobic010G002700 Sobic001G198100--Sobic010G002700 Sobic001G198100--Sobic002G006600 Sobic010G043800 Sobic010G043800 Sobic001G198100--Sobic010G043800 Sobic009G121000 Sobic009G121000 Sobic001G198100--Sobic009G121000 Sobic003G276300 Sobic003G276300 Sobic001G198100--Sobic003G276300 Sobic006G142600 Sobic006G142600 Sobic001G198100--Sobic006G142600
Octagon: transcription factors


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