Gene annotation
Transcriptome id Sobic.010G143800.2,Sobic.010G143800.3,Sobic.010G143800.4
Synonym Sb10g018040
Functional annotation expressed protein
UniProt C5Z323
Pfam -
Panther DB PTHR38530 PTHR38530:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g27370.1 : expressed protein
MaizeGDB (Corn) Zm00025a050742
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G143800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G027400 RNA recognition motif containing protein, expressed K13161: heterogeneous nuclear ribonucleoprotein R
2 Sobic.001G081200 TATA binding protein-associated factor, putative, expressed K03131: transcription initiation factor TFIID subunit 6
3 Sobic.007G161000 RecF/RecN/SMC N terminal domain containing protein, expressed K06636: structural maintenance of chromosome 1
4 Sobic.004G006900 OsFBX49 - F-box domain containing protein, expressed -
5 Sobic.001G529600 1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
6 Sobic.001G365900 PWWP domain containing protein, expressed -
7 Sobic.002G294800 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
8 Sobic.010G021500 WD domain, G-beta repeat domain containing protein, expressed -
9 Sobic.003G398700 expressed protein K15210: snRNA-activating protein complex subunit 3
10 Sobic.003G139900 "Highest expression level in embryo, up-regulation in roots in response to exogenous ABA and PEG"(PubMedID : 27501690)@OsSPL1 - SBP-box gene family member, expressed -
11 Sobic.008G044100 expressed protein -
12 Sobic.004G263600 - K03655: ATP-dependent DNA helicase RecG
13 Sobic.001G222250 - -
14 Sobic.004G174200 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
15 Sobic.010G247800 zinc finger, C3HC4 type domain containing protein, expressed K10696: E3 ubiquitin-protein ligase BRE1
16 Sobic.010G262000 tRNA-dihydrouridine synthase, putative, expressed K05542: tRNA-dihydrouridine synthase 1
17 Sobic.001G289800 BAH domain containing protein, putative, expressed -
18 Sobic.002G031400 OsFBL39 - F-box domain and LRR containing protein, expressed -
19 Sobic.001G241100 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
20 Sobic.001G191600 TMS membrane protein/tumour differentially expressed protein, putative, expressed -


Gene co-expression network
sample Sobic010G143800 Sobic010G143800 Sobic005G027400 Sobic005G027400 Sobic010G143800--Sobic005G027400 Sobic001G081200 Sobic001G081200 Sobic010G143800--Sobic001G081200 Sobic007G161000 Sobic007G161000 Sobic010G143800--Sobic007G161000 Sobic004G006900 Sobic004G006900 Sobic010G143800--Sobic004G006900 Sobic001G529600 Sobic001G529600 Sobic010G143800--Sobic001G529600 Sobic001G365900 Sobic001G365900 Sobic010G143800--Sobic001G365900 Sobic002G294800 Sobic002G294800 Sobic010G143800--Sobic002G294800 Sobic010G021500 Sobic010G021500 Sobic010G143800--Sobic010G021500 Sobic003G398700 Sobic003G398700 Sobic010G143800--Sobic003G398700 Sobic002G309600 Sobic002G309600 Sobic005G027400--Sobic002G309600 Sobic004G065100 Sobic004G065100 Sobic005G027400--Sobic004G065100 Sobic001G451400 Sobic001G451400 Sobic005G027400--Sobic001G451400 Sobic009G132700 Sobic009G132700 Sobic005G027400--Sobic009G132700 Sobic007G117400 Sobic007G117400 Sobic005G027400--Sobic007G117400 Sobic001G219600 Sobic001G219600 Sobic005G027400--Sobic001G219600 Sobic001G289800 Sobic001G289800 Sobic005G027400--Sobic001G289800 Sobic008G047800 Sobic008G047800 Sobic005G027400--Sobic008G047800 Sobic005G027400--Sobic004G006900 Sobic001G081200--Sobic010G143800 Sobic004G178500 Sobic004G178500 Sobic001G081200--Sobic004G178500 Sobic002G064750 Sobic002G064750 Sobic001G081200--Sobic002G064750 Sobic001G191600 Sobic001G191600 Sobic001G081200--Sobic001G191600 Sobic001G222250 Sobic001G222250 Sobic001G081200--Sobic001G222250 Sobic002G031400 Sobic002G031400 Sobic001G081200--Sobic002G031400 Sobic004G181700 Sobic004G181700 Sobic001G081200--Sobic004G181700 Sobic006G145200 Sobic006G145200 Sobic001G081200--Sobic006G145200 Sobic003G217700 Sobic003G217700 Sobic001G081200--Sobic003G217700 Sobic004G039200 Sobic004G039200 Sobic007G161000--Sobic004G039200 Sobic007G161000--Sobic007G117400 Sobic009G024000 Sobic009G024000 Sobic007G161000--Sobic009G024000 Sobic010G139000 Sobic010G139000 Sobic007G161000--Sobic010G139000 Sobic006G182900 Sobic006G182900 Sobic007G161000--Sobic006G182900 Sobic007G161000--Sobic002G309600 Sobic004G314000 Sobic004G314000 Sobic007G161000--Sobic004G314000 Sobic002G134200 Sobic002G134200 Sobic007G161000--Sobic002G134200 Sobic008G028700 Sobic008G028700 Sobic007G161000--Sobic008G028700 Sobic004G006900--Sobic005G027400 Sobic001G441400 Sobic001G441400 Sobic004G006900--Sobic001G441400 Sobic004G006900--Sobic002G309600 Sobic004G006900--Sobic010G143800 Sobic004G263600 Sobic004G263600 Sobic004G006900--Sobic004G263600 Sobic002G299700 Sobic002G299700 Sobic004G006900--Sobic002G299700 Sobic002G275600 Sobic002G275600 Sobic004G006900--Sobic002G275600 Sobic004G006900--Sobic001G451400 Sobic006G252900 Sobic006G252900 Sobic004G006900--Sobic006G252900 Sobic002G316600 Sobic002G316600 Sobic001G529600--Sobic002G316600 Sobic010G079500 Sobic010G079500 Sobic001G529600--Sobic010G079500 Sobic003G166750 Sobic003G166750 Sobic001G529600--Sobic003G166750 Sobic009G109200 Sobic009G109200 Sobic001G529600--Sobic009G109200 Sobic001G542500 Sobic001G542500 Sobic001G529600--Sobic001G542500 Sobic001G529600--Sobic001G289800 Sobic007G063000 Sobic007G063000 Sobic001G529600--Sobic007G063000 Sobic005G008800 Sobic005G008800 Sobic001G529600--Sobic005G008800 Sobic005G122700 Sobic005G122700 Sobic001G529600--Sobic005G122700 Sobic010G206900 Sobic010G206900 Sobic001G365900--Sobic010G206900 Sobic001G534700 Sobic001G534700 Sobic001G365900--Sobic001G534700 Sobic001G289600 Sobic001G289600 Sobic001G365900--Sobic001G289600 Sobic008G130100 Sobic008G130100 Sobic001G365900--Sobic008G130100 Sobic002G411600 Sobic002G411600 Sobic001G365900--Sobic002G411600 Sobic002G008900 Sobic002G008900 Sobic001G365900--Sobic002G008900 Sobic009G191000 Sobic009G191000 Sobic001G365900--Sobic009G191000 Sobic004G034900 Sobic004G034900 Sobic001G365900--Sobic004G034900 Sobic001G540400 Sobic001G540400 Sobic001G365900--Sobic001G540400 Sobic002G294800--Sobic005G027400 Sobic001G241100 Sobic001G241100 Sobic002G294800--Sobic001G241100 Sobic003G355900 Sobic003G355900 Sobic002G294800--Sobic003G355900 Sobic002G211800 Sobic002G211800 Sobic002G294800--Sobic002G211800 Sobic005G059800 Sobic005G059800 Sobic002G294800--Sobic005G059800 Sobic001G261501 Sobic001G261501 Sobic002G294800--Sobic001G261501 Sobic010G032900 Sobic010G032900 Sobic002G294800--Sobic010G032900 Sobic001G389100 Sobic001G389100 Sobic002G294800--Sobic001G389100 Sobic010G013200 Sobic010G013200 Sobic002G294800--Sobic010G013200 Sobic010G021500--Sobic003G398700 Sobic010G167900 Sobic010G167900 Sobic010G021500--Sobic010G167900 Sobic008G113100 Sobic008G113100 Sobic010G021500--Sobic008G113100 Sobic006G096900 Sobic006G096900 Sobic010G021500--Sobic006G096900 Sobic001G456900 Sobic001G456900 Sobic010G021500--Sobic001G456900 Sobic010G149200 Sobic010G149200 Sobic010G021500--Sobic010G149200 Sobic010G021500--Sobic005G027400 Sobic005G100700 Sobic005G100700 Sobic010G021500--Sobic005G100700 Sobic003G221900 Sobic003G221900 Sobic010G021500--Sobic003G221900 Sobic002G257750 Sobic002G257750 Sobic003G398700--Sobic002G257750 Sobic003G398700--Sobic001G456900 Sobic008G044100 Sobic008G044100 Sobic003G398700--Sobic008G044100 Sobic003G398700--Sobic010G021500 Sobic007G136800 Sobic007G136800 Sobic003G398700--Sobic007G136800 Sobic004G185800 Sobic004G185800 Sobic003G398700--Sobic004G185800 Sobic003G168100 Sobic003G168100 Sobic003G398700--Sobic003G168100 Sobic003G398700--Sobic008G113100 Sobic010G126000 Sobic010G126000 Sobic003G398700--Sobic010G126000
Octagon: transcription factors


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