Gene annotation
Transcriptome id Sobic.001G222250.1
Synonym -
Functional annotation -
UniProt A0A1Z5S6U7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G143800 expressed protein -
2 Sobic.005G027400 RNA recognition motif containing protein, expressed K13161: heterogeneous nuclear ribonucleoprotein R
3 Sobic.010G079900 AT hook-containing DNA-binding protein, putative, expressed -
4 Sobic.004G135300 - -
5 Sobic.001G191600 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
6 Sobic.003G109700 expressed protein -
7 Sobic.001G081200 TATA binding protein-associated factor, putative, expressed K03131: transcription initiation factor TFIID subunit 6
8 Sobic.001G298600 ribosomal L18p/L5e family protein, expressed -
9 Sobic.001G362200 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
10 Sobic.006G042200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
11 Sobic.003G139900 "Highest expression level in embryo, up-regulation in roots in response to exogenous ABA and PEG"(PubMedID : 27501690)@OsSPL1 - SBP-box gene family member, expressed -
12 Sobic.010G028800 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
13 Sobic.009G132700 - -
14 Sobic.002G134600 nucleic acid binding protein, putative, expressed -
15 Sobic.004G006900 OsFBX49 - F-box domain containing protein, expressed -
16 Sobic.009G024400 ZOS5-03 - C2H2 zinc finger protein, expressed K09191: general transcription factor IIIA
17 Sobic.004G276300 - -
18 Sobic.002G294800 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
19 Sobic.008G080200 leucine-rich repeat family protein, putative, expressed -
20 Sobic.003G266001 - -


Gene co-expression network
sample Sobic001G222250 Sobic001G222250 Sobic010G143800 Sobic010G143800 Sobic001G222250--Sobic010G143800 Sobic005G027400 Sobic005G027400 Sobic001G222250--Sobic005G027400 Sobic010G079900 Sobic010G079900 Sobic001G222250--Sobic010G079900 Sobic004G135300 Sobic004G135300 Sobic001G222250--Sobic004G135300 Sobic001G191600 Sobic001G191600 Sobic001G222250--Sobic001G191600 Sobic003G109700 Sobic003G109700 Sobic001G222250--Sobic003G109700 Sobic001G081200 Sobic001G081200 Sobic001G222250--Sobic001G081200 Sobic001G298600 Sobic001G298600 Sobic001G222250--Sobic001G298600 Sobic001G362200 Sobic001G362200 Sobic001G222250--Sobic001G362200 Sobic010G143800--Sobic005G027400 Sobic010G143800--Sobic001G081200 Sobic007G161000 Sobic007G161000 Sobic010G143800--Sobic007G161000 Sobic004G006900 Sobic004G006900 Sobic010G143800--Sobic004G006900 Sobic001G529600 Sobic001G529600 Sobic010G143800--Sobic001G529600 Sobic001G365900 Sobic001G365900 Sobic010G143800--Sobic001G365900 Sobic002G294800 Sobic002G294800 Sobic010G143800--Sobic002G294800 Sobic010G021500 Sobic010G021500 Sobic010G143800--Sobic010G021500 Sobic003G398700 Sobic003G398700 Sobic010G143800--Sobic003G398700 Sobic002G309600 Sobic002G309600 Sobic005G027400--Sobic002G309600 Sobic004G065100 Sobic004G065100 Sobic005G027400--Sobic004G065100 Sobic001G451400 Sobic001G451400 Sobic005G027400--Sobic001G451400 Sobic009G132700 Sobic009G132700 Sobic005G027400--Sobic009G132700 Sobic007G117400 Sobic007G117400 Sobic005G027400--Sobic007G117400 Sobic001G219600 Sobic001G219600 Sobic005G027400--Sobic001G219600 Sobic001G289800 Sobic001G289800 Sobic005G027400--Sobic001G289800 Sobic008G047800 Sobic008G047800 Sobic005G027400--Sobic008G047800 Sobic005G027400--Sobic004G006900 Sobic010G079900--Sobic005G027400 Sobic001G309400 Sobic001G309400 Sobic010G079900--Sobic001G309400 Sobic001G260400 Sobic001G260400 Sobic010G079900--Sobic001G260400 Sobic006G199200 Sobic006G199200 Sobic010G079900--Sobic006G199200 Sobic003G086900 Sobic003G086900 Sobic010G079900--Sobic003G086900 Sobic003G184699 Sobic003G184699 Sobic010G079900--Sobic003G184699 Sobic004G142900 Sobic004G142900 Sobic010G079900--Sobic004G142900 Sobic003G139900 Sobic003G139900 Sobic010G079900--Sobic003G139900 Sobic010G079900--Sobic001G222250 Sobic003G084900 Sobic003G084900 Sobic004G135300--Sobic003G084900 Sobic004G135300--Sobic001G222250 Sobic006G042200 Sobic006G042200 Sobic004G135300--Sobic006G042200 Sobic001G409600 Sobic001G409600 Sobic004G135300--Sobic001G409600 Sobic006G273200 Sobic006G273200 Sobic004G135300--Sobic006G273200 Sobic003G088700 Sobic003G088700 Sobic004G135300--Sobic003G088700 Sobic005G128400 Sobic005G128400 Sobic004G135300--Sobic005G128400 Sobic007G009400 Sobic007G009400 Sobic004G135300--Sobic007G009400 Sobic001G267900 Sobic001G267900 Sobic004G135300--Sobic001G267900 Sobic006G086500 Sobic006G086500 Sobic001G191600--Sobic006G086500 Sobic003G029700 Sobic003G029700 Sobic001G191600--Sobic003G029700 Sobic006G142775 Sobic006G142775 Sobic001G191600--Sobic006G142775 Sobic004G205800 Sobic004G205800 Sobic001G191600--Sobic004G205800 Sobic001G318432 Sobic001G318432 Sobic001G191600--Sobic001G318432 Sobic001G191600--Sobic001G365900 Sobic001G191600--Sobic002G294800 Sobic010G076300 Sobic010G076300 Sobic001G191600--Sobic010G076300 Sobic002G173000 Sobic002G173000 Sobic001G191600--Sobic002G173000 Sobic003G109700--Sobic001G362200 Sobic010G056000 Sobic010G056000 Sobic003G109700--Sobic010G056000 Sobic006G032900 Sobic006G032900 Sobic003G109700--Sobic006G032900 Sobic008G125501 Sobic008G125501 Sobic003G109700--Sobic008G125501 Sobic003G372800 Sobic003G372800 Sobic003G109700--Sobic003G372800 Sobic010G028800 Sobic010G028800 Sobic003G109700--Sobic010G028800 Sobic003G109700--Sobic001G222250 Sobic003G109700--Sobic001G267900 Sobic009G103600 Sobic009G103600 Sobic003G109700--Sobic009G103600 Sobic001G081200--Sobic010G143800 Sobic004G178500 Sobic004G178500 Sobic001G081200--Sobic004G178500 Sobic002G064750 Sobic002G064750 Sobic001G081200--Sobic002G064750 Sobic001G081200--Sobic001G191600 Sobic001G081200--Sobic001G222250 Sobic002G031400 Sobic002G031400 Sobic001G081200--Sobic002G031400 Sobic004G181700 Sobic004G181700 Sobic001G081200--Sobic004G181700 Sobic006G145200 Sobic006G145200 Sobic001G081200--Sobic006G145200 Sobic003G217700 Sobic003G217700 Sobic001G081200--Sobic003G217700 Sobic007G132400 Sobic007G132400 Sobic001G298600--Sobic007G132400 Sobic006G228500 Sobic006G228500 Sobic001G298600--Sobic006G228500 Sobic004G121100 Sobic004G121100 Sobic001G298600--Sobic004G121100 Sobic001G107500 Sobic001G107500 Sobic001G298600--Sobic001G107500 Sobic002G310200 Sobic002G310200 Sobic001G298600--Sobic002G310200 Sobic001G298600--Sobic006G273200 Sobic009G215800 Sobic009G215800 Sobic001G298600--Sobic009G215800 Sobic003G176600 Sobic003G176600 Sobic001G298600--Sobic003G176600 Sobic001G281600 Sobic001G281600 Sobic001G298600--Sobic001G281600 Sobic003G332500 Sobic003G332500 Sobic001G362200--Sobic003G332500 Sobic001G362200--Sobic003G109700 Sobic001G362200--Sobic006G032900 Sobic001G102700 Sobic001G102700 Sobic001G362200--Sobic001G102700 Sobic001G515000 Sobic001G515000 Sobic001G362200--Sobic001G515000 Sobic004G192200 Sobic004G192200 Sobic001G362200--Sobic004G192200 Sobic004G072100 Sobic004G072100 Sobic001G362200--Sobic004G072100 Sobic002G134600 Sobic002G134600 Sobic001G362200--Sobic002G134600 Sobic007G183900 Sobic007G183900 Sobic001G362200--Sobic007G183900
Octagon: transcription factors


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