Gene annotation
Transcriptome id Sobic.004G135300.1,Sobic.004G135300.3,Sobic.004G135300.2
Synonym
Functional annotation -
UniProt A0A194YPJ9 , A0A194YPG4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G084900 expressed protein -
2 Sobic.001G222250 - -
3 Sobic.006G042200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
4 Sobic.001G409600 KH domain containing protein, putative, expressed K13095: splicing factor 1
5 Sobic.006G273200 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@protein kinase family protein, putative, expressed K14500: BR-signaling kinase
6 Sobic.003G088700 - -
7 Sobic.005G128400 NLI interacting factor-like phosphatase, putative, expressed K18999: RNA polymerase II C-terminal domain phosphatase-like 3/4
8 Sobic.007G009400 bromodomain domain containing protein, expressed -
9 Sobic.001G267900 - -
10 Sobic.009G178800 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
11 Sobic.003G285000 OsFBX85 - F-box domain containing protein, expressed -
12 Sobic.001G284800 histone H3, putative, expressed K11253: histone H3
13 Sobic.007G096000 expressed protein -
14 Sobic.001G241200 protein kinase domain containing protein, expressed -
15 Sobic.006G183800 KH domain containing protein, putative, expressed K13095: splicing factor 1
16 Sobic.010G101800 dynamin, putative, expressed K01528: dynamin 1/3
17 Sobic.010G028800 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
18 Sobic.010G056000 GAGA-binding protein, putative, expressed -
19 Sobic.002G040800 CAMK_CAMK_like.31 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
20 Sobic.001G016000 expressed protein K07759: poly(ADP-ribose) glycohydrolase


Gene co-expression network
sample Sobic004G135300 Sobic004G135300 Sobic003G084900 Sobic003G084900 Sobic004G135300--Sobic003G084900 Sobic001G222250 Sobic001G222250 Sobic004G135300--Sobic001G222250 Sobic006G042200 Sobic006G042200 Sobic004G135300--Sobic006G042200 Sobic001G409600 Sobic001G409600 Sobic004G135300--Sobic001G409600 Sobic006G273200 Sobic006G273200 Sobic004G135300--Sobic006G273200 Sobic003G088700 Sobic003G088700 Sobic004G135300--Sobic003G088700 Sobic005G128400 Sobic005G128400 Sobic004G135300--Sobic005G128400 Sobic007G009400 Sobic007G009400 Sobic004G135300--Sobic007G009400 Sobic001G267900 Sobic001G267900 Sobic004G135300--Sobic001G267900 Sobic010G056000 Sobic010G056000 Sobic003G084900--Sobic010G056000 Sobic007G096000 Sobic007G096000 Sobic003G084900--Sobic007G096000 Sobic010G028800 Sobic010G028800 Sobic003G084900--Sobic010G028800 Sobic008G173900 Sobic008G173900 Sobic003G084900--Sobic008G173900 Sobic008G054500 Sobic008G054500 Sobic003G084900--Sobic008G054500 Sobic006G165000 Sobic006G165000 Sobic003G084900--Sobic006G165000 Sobic002G144933 Sobic002G144933 Sobic003G084900--Sobic002G144933 Sobic001G111900 Sobic001G111900 Sobic003G084900--Sobic001G111900 Sobic003G268300 Sobic003G268300 Sobic003G084900--Sobic003G268300 Sobic010G143800 Sobic010G143800 Sobic001G222250--Sobic010G143800 Sobic005G027400 Sobic005G027400 Sobic001G222250--Sobic005G027400 Sobic010G079900 Sobic010G079900 Sobic001G222250--Sobic010G079900 Sobic001G222250--Sobic004G135300 Sobic001G191600 Sobic001G191600 Sobic001G222250--Sobic001G191600 Sobic003G109700 Sobic003G109700 Sobic001G222250--Sobic003G109700 Sobic001G081200 Sobic001G081200 Sobic001G222250--Sobic001G081200 Sobic001G298600 Sobic001G298600 Sobic001G222250--Sobic001G298600 Sobic001G362200 Sobic001G362200 Sobic001G222250--Sobic001G362200 Sobic006G042200--Sobic004G135300 Sobic007G054100 Sobic007G054100 Sobic006G042200--Sobic007G054100 Sobic006G042200--Sobic001G222250 Sobic004G174900 Sobic004G174900 Sobic006G042200--Sobic004G174900 Sobic008G125600 Sobic008G125600 Sobic006G042200--Sobic008G125600 Sobic004G010101 Sobic004G010101 Sobic006G042200--Sobic004G010101 Sobic009G008100 Sobic009G008100 Sobic006G042200--Sobic009G008100 Sobic002G073900 Sobic002G073900 Sobic006G042200--Sobic002G073900 Sobic002G040800 Sobic002G040800 Sobic006G042200--Sobic002G040800 Sobic003G397800 Sobic003G397800 Sobic001G409600--Sobic003G397800 Sobic010G101800 Sobic010G101800 Sobic001G409600--Sobic010G101800 Sobic002G297200 Sobic002G297200 Sobic001G409600--Sobic002G297200 Sobic001G109800 Sobic001G109800 Sobic001G409600--Sobic001G109800 Sobic001G125200 Sobic001G125200 Sobic001G409600--Sobic001G125200 Sobic001G409600--Sobic007G096000 Sobic009G249200 Sobic009G249200 Sobic001G409600--Sobic009G249200 Sobic003G187400 Sobic003G187400 Sobic001G409600--Sobic003G187400 Sobic001G016000 Sobic001G016000 Sobic001G409600--Sobic001G016000 Sobic001G497300 Sobic001G497300 Sobic006G273200--Sobic001G497300 Sobic009G065100 Sobic009G065100 Sobic006G273200--Sobic009G065100 Sobic004G205600 Sobic004G205600 Sobic006G273200--Sobic004G205600 Sobic006G273200--Sobic007G096000 Sobic009G233300 Sobic009G233300 Sobic006G273200--Sobic009G233300 Sobic008G062000 Sobic008G062000 Sobic006G273200--Sobic008G062000 Sobic006G237400 Sobic006G237400 Sobic006G273200--Sobic006G237400 Sobic007G205800 Sobic007G205800 Sobic006G273200--Sobic007G205800 Sobic003G176600 Sobic003G176600 Sobic006G273200--Sobic003G176600 Sobic003G088700--Sobic010G056000 Sobic003G205801 Sobic003G205801 Sobic003G088700--Sobic003G205801 Sobic003G088700--Sobic001G111900 Sobic009G178800 Sobic009G178800 Sobic003G088700--Sobic009G178800 Sobic003G088700--Sobic003G084900 Sobic009G127900 Sobic009G127900 Sobic003G088700--Sobic009G127900 Sobic003G088700--Sobic008G125600 Sobic004G039700 Sobic004G039700 Sobic003G088700--Sobic004G039700 Sobic006G183800 Sobic006G183800 Sobic003G088700--Sobic006G183800 Sobic003G293200 Sobic003G293200 Sobic005G128400--Sobic003G293200 Sobic003G266001 Sobic003G266001 Sobic005G128400--Sobic003G266001 Sobic001G154900 Sobic001G154900 Sobic005G128400--Sobic001G154900 Sobic001G016600 Sobic001G016600 Sobic005G128400--Sobic001G016600 Sobic001G241200 Sobic001G241200 Sobic005G128400--Sobic001G241200 Sobic007G105100 Sobic007G105100 Sobic005G128400--Sobic007G105100 Sobic010G069100 Sobic010G069100 Sobic005G128400--Sobic010G069100 Sobic001G540400 Sobic001G540400 Sobic005G128400--Sobic001G540400 Sobic005G008800 Sobic005G008800 Sobic005G128400--Sobic005G008800 Sobic003G241200 Sobic003G241200 Sobic007G009400--Sobic003G241200 Sobic003G401100 Sobic003G401100 Sobic007G009400--Sobic003G401100 Sobic007G009400--Sobic004G205600 Sobic007G009400--Sobic010G101800 Sobic007G104800 Sobic007G104800 Sobic007G009400--Sobic007G104800 Sobic004G325400 Sobic004G325400 Sobic007G009400--Sobic004G325400 Sobic002G388200 Sobic002G388200 Sobic007G009400--Sobic002G388200 Sobic007G009400--Sobic001G409600 Sobic003G081000 Sobic003G081000 Sobic007G009400--Sobic003G081000 Sobic001G267900--Sobic010G056000 Sobic001G267900--Sobic006G165000 Sobic001G267900--Sobic003G084900 Sobic001G267900--Sobic010G028800 Sobic001G518400 Sobic001G518400 Sobic001G267900--Sobic001G518400 Sobic001G267900--Sobic003G241200 Sobic001G094000 Sobic001G094000 Sobic001G267900--Sobic001G094000 Sobic006G222300 Sobic006G222300 Sobic001G267900--Sobic006G222300 Sobic001G267900--Sobic001G362200
Octagon: transcription factors


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