Gene annotation
Transcriptome id Sobic.003G285000.2,Sobic.003G285000.1
Synonym Sb03g033621
Functional annotation OsFBX85 - F-box domain containing protein, expressed
UniProt A0A1W0VZC6 , C5XJ17
Pfam PF12937
Panther DB PTHR32133 PTHR32133:SF126
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G16210 : F-box family protein
RAP-DB (Rice) LOC_Os03g46140.1 : OsFBX101 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU7Hr1G017060.1
Wheat TraesCS4A02G372700 , TraesCS7B02G100900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G544500 expressed protein -
2 Sobic.004G135300 - -
3 Sobic.004G096400 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
4 Sobic.009G132700 - -
5 Sobic.001G222250 - -
6 Sobic.010G079900 AT hook-containing DNA-binding protein, putative, expressed -
7 Sobic.005G027400 RNA recognition motif containing protein, expressed K13161: heterogeneous nuclear ribonucleoprotein R
8 Sobic.010G228700 ATCPSF30/CPSF30, putative, expressed K14404: CPSF4, cleavage and polyadenylation specificity factor subunit 4
9 Sobic.001G261496 - -
10 Sobic.009G239200 - -
11 Sobic.003G332500 EAP30/Vps36 family domain containing protein, expressed K12190: VPS36, ESCRT-II complex subunit VPS36
12 Sobic.009G024400 ZOS5-03 - C2H2 zinc finger protein, expressed K09191: general transcription factor IIIA
13 Sobic.004G158400 AML1, putative, expressed -
14 Sobic.004G182201 - -
15 Sobic.003G168100 BZIP protein, putative, expressed -
16 Sobic.008G088875 - -
17 Sobic.008G051200 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
18 Sobic.004G006900 OsFBX49 - F-box domain containing protein, expressed -
19 Sobic.001G493200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
20 Sobic.003G184699 - -


Gene co-expression network
sample Sobic003G285000 Sobic003G285000 Sobic001G544500 Sobic001G544500 Sobic003G285000--Sobic001G544500 Sobic004G135300 Sobic004G135300 Sobic003G285000--Sobic004G135300 Sobic004G096400 Sobic004G096400 Sobic003G285000--Sobic004G096400 Sobic009G132700 Sobic009G132700 Sobic003G285000--Sobic009G132700 Sobic001G222250 Sobic001G222250 Sobic003G285000--Sobic001G222250 Sobic010G079900 Sobic010G079900 Sobic003G285000--Sobic010G079900 Sobic005G027400 Sobic005G027400 Sobic003G285000--Sobic005G027400 Sobic010G228700 Sobic010G228700 Sobic003G285000--Sobic010G228700 Sobic001G261496 Sobic001G261496 Sobic003G285000--Sobic001G261496 Sobic001G544500--Sobic010G228700 Sobic001G544500--Sobic003G285000 Sobic002G040800 Sobic002G040800 Sobic001G544500--Sobic002G040800 Sobic008G051200 Sobic008G051200 Sobic001G544500--Sobic008G051200 Sobic001G544500--Sobic001G222250 Sobic009G105200 Sobic009G105200 Sobic001G544500--Sobic009G105200 Sobic001G453400 Sobic001G453400 Sobic001G544500--Sobic001G453400 Sobic004G321700 Sobic004G321700 Sobic001G544500--Sobic004G321700 Sobic001G003500 Sobic001G003500 Sobic001G544500--Sobic001G003500 Sobic003G084900 Sobic003G084900 Sobic004G135300--Sobic003G084900 Sobic004G135300--Sobic001G222250 Sobic006G042200 Sobic006G042200 Sobic004G135300--Sobic006G042200 Sobic001G409600 Sobic001G409600 Sobic004G135300--Sobic001G409600 Sobic006G273200 Sobic006G273200 Sobic004G135300--Sobic006G273200 Sobic003G088700 Sobic003G088700 Sobic004G135300--Sobic003G088700 Sobic005G128400 Sobic005G128400 Sobic004G135300--Sobic005G128400 Sobic007G009400 Sobic007G009400 Sobic004G135300--Sobic007G009400 Sobic001G267900 Sobic001G267900 Sobic004G135300--Sobic001G267900 Sobic006G234700 Sobic006G234700 Sobic004G096400--Sobic006G234700 Sobic009G192300 Sobic009G192300 Sobic004G096400--Sobic009G192300 Sobic010G059500 Sobic010G059500 Sobic004G096400--Sobic010G059500 Sobic001G493200 Sobic001G493200 Sobic004G096400--Sobic001G493200 Sobic009G084900 Sobic009G084900 Sobic004G096400--Sobic009G084900 Sobic001G433800 Sobic001G433800 Sobic004G096400--Sobic001G433800 Sobic003G249600 Sobic003G249600 Sobic004G096400--Sobic003G249600 Sobic006G077200 Sobic006G077200 Sobic004G096400--Sobic006G077200 Sobic007G132100 Sobic007G132100 Sobic004G096400--Sobic007G132100 Sobic009G132700--Sobic005G027400 Sobic004G140600 Sobic004G140600 Sobic009G132700--Sobic004G140600 Sobic003G170900 Sobic003G170900 Sobic009G132700--Sobic003G170900 Sobic001G455600 Sobic001G455600 Sobic009G132700--Sobic001G455600 Sobic002G211800 Sobic002G211800 Sobic009G132700--Sobic002G211800 Sobic006G252900 Sobic006G252900 Sobic009G132700--Sobic006G252900 Sobic009G132700--Sobic001G433800 Sobic001G111850 Sobic001G111850 Sobic009G132700--Sobic001G111850 Sobic003G188400 Sobic003G188400 Sobic009G132700--Sobic003G188400 Sobic010G143800 Sobic010G143800 Sobic001G222250--Sobic010G143800 Sobic001G222250--Sobic005G027400 Sobic001G222250--Sobic010G079900 Sobic001G222250--Sobic004G135300 Sobic001G191600 Sobic001G191600 Sobic001G222250--Sobic001G191600 Sobic003G109700 Sobic003G109700 Sobic001G222250--Sobic003G109700 Sobic001G081200 Sobic001G081200 Sobic001G222250--Sobic001G081200 Sobic001G298600 Sobic001G298600 Sobic001G222250--Sobic001G298600 Sobic001G362200 Sobic001G362200 Sobic001G222250--Sobic001G362200 Sobic010G079900--Sobic005G027400 Sobic001G309400 Sobic001G309400 Sobic010G079900--Sobic001G309400 Sobic001G260400 Sobic001G260400 Sobic010G079900--Sobic001G260400 Sobic006G199200 Sobic006G199200 Sobic010G079900--Sobic006G199200 Sobic003G086900 Sobic003G086900 Sobic010G079900--Sobic003G086900 Sobic003G184699 Sobic003G184699 Sobic010G079900--Sobic003G184699 Sobic004G142900 Sobic004G142900 Sobic010G079900--Sobic004G142900 Sobic003G139900 Sobic003G139900 Sobic010G079900--Sobic003G139900 Sobic010G079900--Sobic001G222250 Sobic002G309600 Sobic002G309600 Sobic005G027400--Sobic002G309600 Sobic004G065100 Sobic004G065100 Sobic005G027400--Sobic004G065100 Sobic001G451400 Sobic001G451400 Sobic005G027400--Sobic001G451400 Sobic005G027400--Sobic009G132700 Sobic007G117400 Sobic007G117400 Sobic005G027400--Sobic007G117400 Sobic001G219600 Sobic001G219600 Sobic005G027400--Sobic001G219600 Sobic001G289800 Sobic001G289800 Sobic005G027400--Sobic001G289800 Sobic008G047800 Sobic008G047800 Sobic005G027400--Sobic008G047800 Sobic004G006900 Sobic004G006900 Sobic005G027400--Sobic004G006900 Sobic010G228700--Sobic001G544500 Sobic010G228700--Sobic002G040800 Sobic009G105800 Sobic009G105800 Sobic010G228700--Sobic009G105800 Sobic010G228700--Sobic009G105200 Sobic010G171100 Sobic010G171100 Sobic010G228700--Sobic010G171100 Sobic007G000300 Sobic007G000300 Sobic010G228700--Sobic007G000300 Sobic002G238000 Sobic002G238000 Sobic010G228700--Sobic002G238000 Sobic001G119900 Sobic001G119900 Sobic010G228700--Sobic001G119900 Sobic006G125900 Sobic006G125900 Sobic010G228700--Sobic006G125900 Sobic006G222300 Sobic006G222300 Sobic001G261496--Sobic006G222300 Sobic003G205801 Sobic003G205801 Sobic001G261496--Sobic003G205801 Sobic004G096500 Sobic004G096500 Sobic001G261496--Sobic004G096500 Sobic010G143200 Sobic010G143200 Sobic001G261496--Sobic010G143200 Sobic002G144933 Sobic002G144933 Sobic001G261496--Sobic002G144933 Sobic009G102500 Sobic009G102500 Sobic001G261496--Sobic009G102500 Sobic001G261496--Sobic003G084900 Sobic001G228700 Sobic001G228700 Sobic001G261496--Sobic001G228700 Sobic009G083500 Sobic009G083500 Sobic001G261496--Sobic009G083500
Octagon: transcription factors


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