Gene annotation
Transcriptome id Sobic.008G088875.1
Synonym -
Functional annotation -
UniProt A0A109NDQ1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g01270.1 : START domain containing protein, expressed
MaizeGDB (Corn) Zm00025a035094
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G188400 glutamate dehydrogenase protein, putative, expressed K00262: E1.4.1.4, glutamate dehydrogenase (NADP+)
2 Sobic.004G340400 translation initiation factor eIF-2B subunit epsilon, putative, expressed K03240: translation initiation factor eIF-2B subunit epsilon
3 Sobic.002G145800 flowering time control protein FCA, putative, expressed -
4 Sobic.001G461400 pre-mRNA-processing factor 39, putative, expressed K13217: PRPF39, pre-mRNA-processing factor 39
5 Sobic.003G217200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
6 Sobic.008G063300 exonuclease, putative, expressed K14570: REX1, REXO1, RNA exonuclease 1
7 Sobic.002G371700 signal recognition particle 68 kDa protein, putative, expressed K03107: signal recognition particle subunit SRP68
8 Sobic.010G007100 AAA family ATPase, putative, expressed K14571: RIX7, ribosome biogenesis ATPase
9 Sobic.010G237900 RNA recognition motif containing protein, putative, expressed -
10 Sobic.004G235300 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
11 Sobic.004G256500 WD domain, G-beta repeat domain containing protein, expressed K12616: enhancer of mRNA-decapping protein 4
12 Sobic.001G401500 programmed cell death protein 2, putative, expressed K14801: pre-rRNA-processing protein TSR4
13 Sobic.001G393900 FAD binding domain containing protein, expressed -
14 Sobic.003G168100 BZIP protein, putative, expressed -
15 Sobic.001G063700 expressed protein -
16 Sobic.001G087600 ZOS9-03 - C2H2 zinc finger protein, expressed -
17 Sobic.001G145400 threonyl-tRNA synthetase, mitochondrial precursor, putative, expressed K01868: TARS, threonyl-tRNA synthetase
18 Sobic.001G020000 metallo-beta-lactamase, putative, expressed K14402: CPSF2, cleavage and polyadenylation specificity factor subunit 2
19 Sobic.005G117500 - -
20 Sobic.008G147200 tubulin, putative, expressed -


Gene co-expression network
sample Sobic008G088875 Sobic008G088875 Sobic003G188400 Sobic003G188400 Sobic008G088875--Sobic003G188400 Sobic004G340400 Sobic004G340400 Sobic008G088875--Sobic004G340400 Sobic002G145800 Sobic002G145800 Sobic008G088875--Sobic002G145800 Sobic001G461400 Sobic001G461400 Sobic008G088875--Sobic001G461400 Sobic003G217200 Sobic003G217200 Sobic008G088875--Sobic003G217200 Sobic008G063300 Sobic008G063300 Sobic008G088875--Sobic008G063300 Sobic002G371700 Sobic002G371700 Sobic008G088875--Sobic002G371700 Sobic010G007100 Sobic010G007100 Sobic008G088875--Sobic010G007100 Sobic010G237900 Sobic010G237900 Sobic008G088875--Sobic010G237900 Sobic001G433800 Sobic001G433800 Sobic003G188400--Sobic001G433800 Sobic001G063700 Sobic001G063700 Sobic003G188400--Sobic001G063700 Sobic003G360400 Sobic003G360400 Sobic003G188400--Sobic003G360400 Sobic002G133300 Sobic002G133300 Sobic003G188400--Sobic002G133300 Sobic003G095900 Sobic003G095900 Sobic003G188400--Sobic003G095900 Sobic002G317200 Sobic002G317200 Sobic003G188400--Sobic002G317200 Sobic007G159900 Sobic007G159900 Sobic003G188400--Sobic007G159900 Sobic010G112100 Sobic010G112100 Sobic003G188400--Sobic010G112100 Sobic001G311500 Sobic001G311500 Sobic003G188400--Sobic001G311500 Sobic001G145400 Sobic001G145400 Sobic004G340400--Sobic001G145400 Sobic001G291800 Sobic001G291800 Sobic004G340400--Sobic001G291800 Sobic004G320500 Sobic004G320500 Sobic004G340400--Sobic004G320500 Sobic004G340400--Sobic010G007100 Sobic008G160000 Sobic008G160000 Sobic004G340400--Sobic008G160000 Sobic001G052400 Sobic001G052400 Sobic004G340400--Sobic001G052400 Sobic001G455800 Sobic001G455800 Sobic004G340400--Sobic001G455800 Sobic004G145000 Sobic004G145000 Sobic004G340400--Sobic004G145000 Sobic001G401500 Sobic001G401500 Sobic004G340400--Sobic001G401500 Sobic006G269800 Sobic006G269800 Sobic002G145800--Sobic006G269800 Sobic003G416700 Sobic003G416700 Sobic002G145800--Sobic003G416700 Sobic007G183300 Sobic007G183300 Sobic002G145800--Sobic007G183300 Sobic001G087600 Sobic001G087600 Sobic002G145800--Sobic001G087600 Sobic001G051700 Sobic001G051700 Sobic002G145800--Sobic001G051700 Sobic003G062300 Sobic003G062300 Sobic002G145800--Sobic003G062300 Sobic008G147200 Sobic008G147200 Sobic002G145800--Sobic008G147200 Sobic001G023000 Sobic001G023000 Sobic002G145800--Sobic001G023000 Sobic010G186600 Sobic010G186600 Sobic002G145800--Sobic010G186600 Sobic001G461400--Sobic001G063700 Sobic001G461400--Sobic003G416700 Sobic002G264200 Sobic002G264200 Sobic001G461400--Sobic002G264200 Sobic002G154000 Sobic002G154000 Sobic001G461400--Sobic002G154000 Sobic001G461400--Sobic001G087600 Sobic005G200800 Sobic005G200800 Sobic001G461400--Sobic005G200800 Sobic001G461400--Sobic003G360400 Sobic002G071500 Sobic002G071500 Sobic001G461400--Sobic002G071500 Sobic001G461400--Sobic010G112100 Sobic001G542450 Sobic001G542450 Sobic003G217200--Sobic001G542450 Sobic003G052800 Sobic003G052800 Sobic003G217200--Sobic003G052800 Sobic002G371600 Sobic002G371600 Sobic003G217200--Sobic002G371600 Sobic003G217200--Sobic006G269800 Sobic002G374300 Sobic002G374300 Sobic003G217200--Sobic002G374300 Sobic003G217200--Sobic008G088875 Sobic003G217200--Sobic001G087600 Sobic001G346900 Sobic001G346900 Sobic003G217200--Sobic001G346900 Sobic002G372500 Sobic002G372500 Sobic003G217200--Sobic002G372500 Sobic004G140600 Sobic004G140600 Sobic008G063300--Sobic004G140600 Sobic008G063300--Sobic001G433800 Sobic006G096900 Sobic006G096900 Sobic008G063300--Sobic006G096900 Sobic008G063300--Sobic003G360400 Sobic008G063300--Sobic003G095900 Sobic010G123600 Sobic010G123600 Sobic008G063300--Sobic010G123600 Sobic008G063300--Sobic003G188400 Sobic009G177500 Sobic009G177500 Sobic008G063300--Sobic009G177500 Sobic010G059500 Sobic010G059500 Sobic008G063300--Sobic010G059500 Sobic008G103300 Sobic008G103300 Sobic002G371700--Sobic008G103300 Sobic004G053500 Sobic004G053500 Sobic002G371700--Sobic004G053500 Sobic002G371700--Sobic010G059500 Sobic002G142900 Sobic002G142900 Sobic002G371700--Sobic002G142900 Sobic004G131300 Sobic004G131300 Sobic002G371700--Sobic004G131300 Sobic002G401500 Sobic002G401500 Sobic002G371700--Sobic002G401500 Sobic005G110499 Sobic005G110499 Sobic002G371700--Sobic005G110499 Sobic002G371700--Sobic001G087600 Sobic003G363700 Sobic003G363700 Sobic002G371700--Sobic003G363700 Sobic010G007100--Sobic001G145400 Sobic010G007100--Sobic008G147200 Sobic010G007100--Sobic004G340400 Sobic006G086600 Sobic006G086600 Sobic010G007100--Sobic006G086600 Sobic005G137700 Sobic005G137700 Sobic010G007100--Sobic005G137700 Sobic006G077200 Sobic006G077200 Sobic010G007100--Sobic006G077200 Sobic002G235200 Sobic002G235200 Sobic010G007100--Sobic002G235200 Sobic006G002800 Sobic006G002800 Sobic010G007100--Sobic006G002800 Sobic003G042400 Sobic003G042400 Sobic010G007100--Sobic003G042400 Sobic004G129300 Sobic004G129300 Sobic010G237900--Sobic004G129300 Sobic007G191700 Sobic007G191700 Sobic010G237900--Sobic007G191700 Sobic001G002600 Sobic001G002600 Sobic010G237900--Sobic001G002600 Sobic007G084100 Sobic007G084100 Sobic010G237900--Sobic007G084100 Sobic002G425500 Sobic002G425500 Sobic010G237900--Sobic002G425500 Sobic006G014100 Sobic006G014100 Sobic010G237900--Sobic006G014100 Sobic003G121300 Sobic003G121300 Sobic010G237900--Sobic003G121300 Sobic004G156800 Sobic004G156800 Sobic010G237900--Sobic004G156800 Sobic010G145800 Sobic010G145800 Sobic010G237900--Sobic010G145800
Octagon: transcription factors


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