Gene annotation
Transcriptome id Sobic.004G299000.1
Synonym Sb04g033290
Functional annotation expressed protein
UniProt A0A194YSF4
Pfam PF09749
Panther DB PTHR13522
NCBI CDD KOG3102; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0004518; nuclease activity


Orthologs (automatic annotation)
TAIR AT5G51170 : -
RAP-DB (Rice) LOC_Os02g43480.1 : expressed protein
MaizeGDB (Corn) Zm00025a020925
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G299000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G468700 expressed protein -
2 Sobic.003G017100 ABC transporter, ATP-binding protein, putative, expressed -
3 Sobic.004G028500 pyridoxal biosynthesis protein PDX2, putative, expressed K08681: pdxT, 5'-phosphate synthase pdxT subunit
4 Sobic.002G121600 myb-like DNA-binding domain containing protein, expressed -
5 Sobic.003G247400 OsCttP1 - Putative C-terminal processing peptidase homologue, expressed -
6 Sobic.009G191100 expressed protein -
7 Sobic.004G258700 PHD-finger family protein, expressed -
8 Sobic.007G113800 early-responsive to dehydration protein-related, putative, expressed -
9 Sobic.003G332800 GTPase-activating protein, putative, expressed -
10 Sobic.003G313300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plus-3 domain containing protein, expressed -
11 Sobic.006G079400 - -
12 Sobic.002G358500 - -
13 Sobic.001G198100 PAP fibrillin family domain containing protein, expressed -
14 Sobic.007G136800 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2
15 Sobic.004G164400 expressed protein -
16 Sobic.002G228700 patatin, putative, expressed -
17 Sobic.001G204000 expressed protein -
18 Sobic.003G429650 - -
19 Sobic.008G168300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tentative name(PubMedID : 31536532)@nuclear transcription factor Y subunit, putative, expressed K08064: NFYA, nuclear transcription factor Y, alpha
20 Sobic.005G045000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed K09480: digalactosyldiacylglycerol synthase


Gene co-expression network
sample Sobic004G299000 Sobic004G299000 Sobic001G468700 Sobic001G468700 Sobic004G299000--Sobic001G468700 Sobic003G017100 Sobic003G017100 Sobic004G299000--Sobic003G017100 Sobic004G028500 Sobic004G028500 Sobic004G299000--Sobic004G028500 Sobic002G121600 Sobic002G121600 Sobic004G299000--Sobic002G121600 Sobic003G247400 Sobic003G247400 Sobic004G299000--Sobic003G247400 Sobic009G191100 Sobic009G191100 Sobic004G299000--Sobic009G191100 Sobic004G258700 Sobic004G258700 Sobic004G299000--Sobic004G258700 Sobic007G113800 Sobic007G113800 Sobic004G299000--Sobic007G113800 Sobic003G332800 Sobic003G332800 Sobic004G299000--Sobic003G332800 Sobic010G002700 Sobic010G002700 Sobic001G468700--Sobic010G002700 Sobic001G468700--Sobic003G017100 Sobic001G468700--Sobic004G028500 Sobic001G017300 Sobic001G017300 Sobic001G468700--Sobic001G017300 Sobic009G121000 Sobic009G121000 Sobic001G468700--Sobic009G121000 Sobic001G468700--Sobic003G247400 Sobic003G313300 Sobic003G313300 Sobic001G468700--Sobic003G313300 Sobic003G276300 Sobic003G276300 Sobic001G468700--Sobic003G276300 Sobic003G004200 Sobic003G004200 Sobic001G468700--Sobic003G004200 Sobic002G006600 Sobic002G006600 Sobic003G017100--Sobic002G006600 Sobic003G017100--Sobic010G002700 Sobic001G198100 Sobic001G198100 Sobic003G017100--Sobic001G198100 Sobic003G017100--Sobic003G276300 Sobic001G169900 Sobic001G169900 Sobic003G017100--Sobic001G169900 Sobic003G017100--Sobic003G313300 Sobic003G017100--Sobic001G468700 Sobic003G017100--Sobic003G247400 Sobic003G191700 Sobic003G191700 Sobic003G017100--Sobic003G191700 Sobic004G028500--Sobic001G468700 Sobic004G028500--Sobic003G313300 Sobic001G100100 Sobic001G100100 Sobic004G028500--Sobic001G100100 Sobic004G028500--Sobic003G017100 Sobic004G028500--Sobic010G002700 Sobic005G045000 Sobic005G045000 Sobic004G028500--Sobic005G045000 Sobic004G028500--Sobic002G006600 Sobic004G028500--Sobic003G004200 Sobic004G028500--Sobic001G198100 Sobic001G356500 Sobic001G356500 Sobic002G121600--Sobic001G356500 Sobic002G121600--Sobic009G191100 Sobic002G133400 Sobic002G133400 Sobic002G121600--Sobic002G133400 Sobic003G148000 Sobic003G148000 Sobic002G121600--Sobic003G148000 Sobic002G343901 Sobic002G343901 Sobic002G121600--Sobic002G343901 Sobic001G456900 Sobic001G456900 Sobic002G121600--Sobic001G456900 Sobic002G121600--Sobic003G332800 Sobic007G065400 Sobic007G065400 Sobic002G121600--Sobic007G065400 Sobic008G113100 Sobic008G113100 Sobic002G121600--Sobic008G113100 Sobic003G247400--Sobic001G198100 Sobic003G247400--Sobic003G276300 Sobic003G247400--Sobic009G121000 Sobic010G043800 Sobic010G043800 Sobic003G247400--Sobic010G043800 Sobic003G247400--Sobic010G002700 Sobic003G247400--Sobic003G017100 Sobic007G185700 Sobic007G185700 Sobic003G247400--Sobic007G185700 Sobic007G136200 Sobic007G136200 Sobic003G247400--Sobic007G136200 Sobic003G247400--Sobic001G468700 Sobic002G358500 Sobic002G358500 Sobic009G191100--Sobic002G358500 Sobic009G191100--Sobic002G121600 Sobic009G191100--Sobic007G113800 Sobic004G182900 Sobic004G182900 Sobic009G191100--Sobic004G182900 Sobic009G191100--Sobic004G299000 Sobic002G031600 Sobic002G031600 Sobic009G191100--Sobic002G031600 Sobic007G173200 Sobic007G173200 Sobic009G191100--Sobic007G173200 Sobic002G228700 Sobic002G228700 Sobic009G191100--Sobic002G228700 Sobic009G191100--Sobic004G258700 Sobic004G258700--Sobic008G113100 Sobic008G028700 Sobic008G028700 Sobic004G258700--Sobic008G028700 Sobic004G258700--Sobic001G456900 Sobic004G258700--Sobic003G148000 Sobic003G101500 Sobic003G101500 Sobic004G258700--Sobic003G101500 Sobic010G277500 Sobic010G277500 Sobic004G258700--Sobic010G277500 Sobic004G258700--Sobic007G065400 Sobic007G161000 Sobic007G161000 Sobic004G258700--Sobic007G161000 Sobic009G040600 Sobic009G040600 Sobic004G258700--Sobic009G040600 Sobic007G113800--Sobic003G148000 Sobic006G079400 Sobic006G079400 Sobic007G113800--Sobic006G079400 Sobic005G110472 Sobic005G110472 Sobic007G113800--Sobic005G110472 Sobic010G202000 Sobic010G202000 Sobic007G113800--Sobic010G202000 Sobic005G144400 Sobic005G144400 Sobic007G113800--Sobic005G144400 Sobic001G067850 Sobic001G067850 Sobic007G113800--Sobic001G067850 Sobic002G243900 Sobic002G243900 Sobic007G113800--Sobic002G243900 Sobic006G048500 Sobic006G048500 Sobic007G113800--Sobic006G048500 Sobic003G179201 Sobic003G179201 Sobic007G113800--Sobic003G179201 Sobic007G096600 Sobic007G096600 Sobic003G332800--Sobic007G096600 Sobic006G216800 Sobic006G216800 Sobic003G332800--Sobic006G216800 Sobic003G332800--Sobic003G148000 Sobic002G006900 Sobic002G006900 Sobic003G332800--Sobic002G006900 Sobic007G167500 Sobic007G167500 Sobic003G332800--Sobic007G167500 Sobic009G209300 Sobic009G209300 Sobic003G332800--Sobic009G209300 Sobic003G332800--Sobic002G243900 Sobic003G332800--Sobic007G065400 Sobic003G176500 Sobic003G176500 Sobic003G332800--Sobic003G176500
Octagon: transcription factors


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