Gene annotation
Transcriptome id Sobic.008G168300.1
Synonym SbNF-YA7,Nuclear Factor Y, Sb08g021370, NF-YA7
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
tentative name (PubMedID : 31536532)
nuclear transcription factor Y subunit, putative, expressed
UniProt C5YRY5
Pfam PF02045
Panther DB PTHR12632
NCBI CDD -
KEGG Orthology K08064; NFYA, nuclear transcription factor Y, alpha
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G30500 : nuclear factor Y, subunit A7
RAP-DB (Rice) LOC_Os12g41880.2 : nuclear transcription factor Y subunit, putative, expressed
MaizeGDB (Corn) Zm00025a025365 , Zm00025a004681
Brachypodium -
Barley HORVU5Hr1G010600.12 , HORVU5Hr1G010600.13 , HORVU5Hr1G010600.10 , HORVU5Hr1G010600.11 , HORVU5Hr1G010600.16 , HORVU5Hr1G010600.17 , HORVU5Hr1G010600.14 , HORVU5Hr1G010600.15 , HORVU5Hr1G010600.8 , HORVU5Hr1G010600.9 , HORVU5Hr1G010600.1 , HORVU5Hr1G010600.2 , HORVU5Hr1G010600.3 , HORVU5Hr1G010600.4 , HORVU5Hr1G010600.6 , HORVU5Hr1G010600.7 , HORVU0Hr1G010230.1 , HORVU0Hr1G010230.2 , HORVU0Hr1G010230.3
Wheat TraesCS5A02G043300 , TraesCS5A02G043300
Populus -


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cDNA sequences
Sobic.008G168300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G355700 C2 domain containing protein, putative, expressed -
2 Sobic.001G017300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA-binding protein containing a PIN domain, putative, expressed K06962: uncharacterized protein
3 Sobic.002G121600 myb-like DNA-binding domain containing protein, expressed -
4 Sobic.005G045000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed K09480: digalactosyldiacylglycerol synthase
5 Sobic.003G229300 NLI interacting factor-like phosphatase, putative, expressed K17616: CTD small phosphatase-like protein 2
6 Sobic.001G468700 expressed protein -
7 Sobic.010G085100 geminivirus Rep-interacting motor protein, putative, expressed -
8 Sobic.001G239500 starch synthase, putative, expressed K00703: starch synthase
9 Sobic.001G514800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine acetyltransferase protein, putative, expressed K00640: serine O-acetyltransferase
10 Sobic.004G347800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OTU-like cysteine protease family protein, putative, expressed -
11 Sobic.001G305600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
12 Sobic.004G042200 OsFBO8 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
13 Sobic.003G313300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plus-3 domain containing protein, expressed -
14 Sobic.004G028500 pyridoxal biosynthesis protein PDX2, putative, expressed K08681: pdxT, 5'-phosphate synthase pdxT subunit
15 Sobic.008G151100 protein kinase domain containing protein, expressed -
16 Sobic.010G176200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.005G198000 armadillo/beta-catenin-like repeat family protein, expressed -
18 Sobic.004G281800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, expressed -
19 Sobic.003G262200 E3 ubiquitin ligase, putative, expressed K16276: K16276, zinc finger protein-like protein
20 Sobic.001G212300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myosin-2 heavy chain, non muscle, putative, expressed -


Gene co-expression network
sample Sobic008G168300 Sobic008G168300 Sobic004G355700 Sobic004G355700 Sobic008G168300--Sobic004G355700 Sobic001G017300 Sobic001G017300 Sobic008G168300--Sobic001G017300 Sobic002G121600 Sobic002G121600 Sobic008G168300--Sobic002G121600 Sobic005G045000 Sobic005G045000 Sobic008G168300--Sobic005G045000 Sobic003G229300 Sobic003G229300 Sobic008G168300--Sobic003G229300 Sobic001G468700 Sobic001G468700 Sobic008G168300--Sobic001G468700 Sobic010G085100 Sobic010G085100 Sobic008G168300--Sobic010G085100 Sobic001G239500 Sobic001G239500 Sobic008G168300--Sobic001G239500 Sobic001G514800 Sobic001G514800 Sobic008G168300--Sobic001G514800 Sobic003G271400 Sobic003G271400 Sobic004G355700--Sobic003G271400 Sobic001G212300 Sobic001G212300 Sobic004G355700--Sobic001G212300 Sobic004G337400 Sobic004G337400 Sobic004G355700--Sobic004G337400 Sobic004G042200 Sobic004G042200 Sobic004G355700--Sobic004G042200 Sobic005G198000 Sobic005G198000 Sobic004G355700--Sobic005G198000 Sobic004G355700--Sobic008G168300 Sobic003G276300 Sobic003G276300 Sobic004G355700--Sobic003G276300 Sobic005G106600 Sobic005G106600 Sobic004G355700--Sobic005G106600 Sobic003G191700 Sobic003G191700 Sobic004G355700--Sobic003G191700 Sobic006G158100 Sobic006G158100 Sobic001G017300--Sobic006G158100 Sobic004G356400 Sobic004G356400 Sobic001G017300--Sobic004G356400 Sobic006G093800 Sobic006G093800 Sobic001G017300--Sobic006G093800 Sobic010G249700 Sobic010G249700 Sobic001G017300--Sobic010G249700 Sobic007G136200 Sobic007G136200 Sobic001G017300--Sobic007G136200 Sobic001G017300--Sobic003G276300 Sobic005G101200 Sobic005G101200 Sobic001G017300--Sobic005G101200 Sobic001G169900 Sobic001G169900 Sobic001G017300--Sobic001G169900 Sobic010G002700 Sobic010G002700 Sobic001G017300--Sobic010G002700 Sobic001G356500 Sobic001G356500 Sobic002G121600--Sobic001G356500 Sobic009G191100 Sobic009G191100 Sobic002G121600--Sobic009G191100 Sobic002G133400 Sobic002G133400 Sobic002G121600--Sobic002G133400 Sobic003G148000 Sobic003G148000 Sobic002G121600--Sobic003G148000 Sobic002G343901 Sobic002G343901 Sobic002G121600--Sobic002G343901 Sobic001G456900 Sobic001G456900 Sobic002G121600--Sobic001G456900 Sobic003G332800 Sobic003G332800 Sobic002G121600--Sobic003G332800 Sobic007G065400 Sobic007G065400 Sobic002G121600--Sobic007G065400 Sobic008G113100 Sobic008G113100 Sobic002G121600--Sobic008G113100 Sobic003G313300 Sobic003G313300 Sobic005G045000--Sobic003G313300 Sobic001G305600 Sobic001G305600 Sobic005G045000--Sobic001G305600 Sobic005G045000--Sobic001G468700 Sobic003G017100 Sobic003G017100 Sobic005G045000--Sobic003G017100 Sobic004G028500 Sobic004G028500 Sobic005G045000--Sobic004G028500 Sobic005G045000--Sobic003G191700 Sobic004G347800 Sobic004G347800 Sobic005G045000--Sobic004G347800 Sobic008G151100 Sobic008G151100 Sobic005G045000--Sobic008G151100 Sobic005G045000--Sobic008G168300 Sobic003G229300--Sobic003G191700 Sobic010G176200 Sobic010G176200 Sobic003G229300--Sobic010G176200 Sobic006G133900 Sobic006G133900 Sobic003G229300--Sobic006G133900 Sobic003G229300--Sobic004G042200 Sobic003G229300--Sobic001G169900 Sobic008G115900 Sobic008G115900 Sobic003G229300--Sobic008G115900 Sobic007G198300 Sobic007G198300 Sobic003G229300--Sobic007G198300 Sobic003G262200 Sobic003G262200 Sobic003G229300--Sobic003G262200 Sobic003G222900 Sobic003G222900 Sobic003G229300--Sobic003G222900 Sobic001G468700--Sobic010G002700 Sobic001G468700--Sobic003G017100 Sobic001G468700--Sobic004G028500 Sobic001G468700--Sobic001G017300 Sobic009G121000 Sobic009G121000 Sobic001G468700--Sobic009G121000 Sobic003G247400 Sobic003G247400 Sobic001G468700--Sobic003G247400 Sobic001G468700--Sobic003G313300 Sobic001G468700--Sobic003G276300 Sobic003G004200 Sobic003G004200 Sobic001G468700--Sobic003G004200 Sobic010G085100--Sobic005G101200 Sobic003G185900 Sobic003G185900 Sobic010G085100--Sobic003G185900 Sobic007G105500 Sobic007G105500 Sobic010G085100--Sobic007G105500 Sobic002G404800 Sobic002G404800 Sobic010G085100--Sobic002G404800 Sobic004G215800 Sobic004G215800 Sobic010G085100--Sobic004G215800 Sobic008G140200 Sobic008G140200 Sobic010G085100--Sobic008G140200 Sobic003G036200 Sobic003G036200 Sobic010G085100--Sobic003G036200 Sobic008G033000 Sobic008G033000 Sobic010G085100--Sobic008G033000 Sobic004G154200 Sobic004G154200 Sobic010G085100--Sobic004G154200 Sobic004G343500 Sobic004G343500 Sobic001G239500--Sobic004G343500 Sobic002G273300 Sobic002G273300 Sobic001G239500--Sobic002G273300 Sobic001G239500--Sobic001G514800 Sobic001G239500--Sobic008G168300 Sobic001G239500--Sobic003G004200 Sobic009G054900 Sobic009G054900 Sobic001G239500--Sobic009G054900 Sobic001G207700 Sobic001G207700 Sobic001G239500--Sobic001G207700 Sobic009G249600 Sobic009G249600 Sobic001G239500--Sobic009G249600 Sobic007G047400 Sobic007G047400 Sobic001G239500--Sobic007G047400 Sobic001G514800--Sobic001G017300 Sobic001G514800--Sobic001G239500 Sobic002G172700 Sobic002G172700 Sobic001G514800--Sobic002G172700 Sobic001G514800--Sobic009G054900 Sobic001G020100 Sobic001G020100 Sobic001G514800--Sobic001G020100 Sobic004G035900 Sobic004G035900 Sobic001G514800--Sobic004G035900 Sobic006G130300 Sobic006G130300 Sobic001G514800--Sobic006G130300 Sobic001G514800--Sobic004G356400 Sobic001G514800--Sobic007G136200
Octagon: transcription factors


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