Gene annotation
Transcriptome id Sobic.001G468700.1
Synonym Sb01g043940, JAC1
Functional annotation expressed protein
UniProt C5WTV9
Pfam -
Panther DB PTHR23172 PTHR23172:SF37
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G75100 : J-domain protein required for chloroplast accumulation response 1
RAP-DB (Rice) LOC_Os03g10180.1 : expressed protein
MaizeGDB (Corn) Zm00025a053168
Brachypodium PNT77973 , KQK23104 , KQK23103
Barley HORVU4Hr1G070720.10 , HORVU4Hr1G070720.8 , HORVU4Hr1G070720.9 , HORVU4Hr1G070720.4 , HORVU4Hr1G070720.5 , HORVU4Hr1G070720.6 , HORVU4Hr1G070720.7 , HORVU4Hr1G070720.1 , HORVU4Hr1G070720.2 , HORVU4Hr1G070720.3 , HORVU4Hr1G070720.11
Wheat TraesCS4D02G261900 , TraesCS4A02G041000 , TraesCS4A02G041000 , TraesCS4A02G041000 , TraesCS4B02G261900 , TraesCS4B02G261900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G002700 expressed protein -
2 Sobic.003G017100 ABC transporter, ATP-binding protein, putative, expressed -
3 Sobic.004G028500 pyridoxal biosynthesis protein PDX2, putative, expressed K08681: pdxT, 5'-phosphate synthase pdxT subunit
4 Sobic.001G017300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA-binding protein containing a PIN domain, putative, expressed K06962: uncharacterized protein
5 Sobic.009G121000 expressed protein -
6 Sobic.003G247400 OsCttP1 - Putative C-terminal processing peptidase homologue, expressed -
7 Sobic.003G313300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plus-3 domain containing protein, expressed -
8 Sobic.003G276300 zinc knuckle domain containing protein, expressed -
9 Sobic.003G004200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutaredoxin, putative, expressed -
10 Sobic.005G118400 expressed protein -
11 Sobic.001G198100 PAP fibrillin family domain containing protein, expressed -
12 Sobic.010G085100 geminivirus Rep-interacting motor protein, putative, expressed -
13 Sobic.006G093800 GRAS family transcription factor domain containing protein, expressed -
14 Sobic.001G530900 expressed protein -
15 Sobic.003G332700 Os1bglu5 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
16 Sobic.007G136200 expressed protein -
17 Sobic.002G006600 -(PubMedID : 26976818)@aminotransferase, classes I and II, domain containing protein, expressed K14272: glutamate--glyoxylate aminotransferase
18 Sobic.001G073900 lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
19 Sobic.001G065600 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase
20 Sobic.001G169900 seed maturation protein PM23, putative, expressed -


Gene co-expression network
sample Sobic001G468700 Sobic001G468700 Sobic010G002700 Sobic010G002700 Sobic001G468700--Sobic010G002700 Sobic003G017100 Sobic003G017100 Sobic001G468700--Sobic003G017100 Sobic004G028500 Sobic004G028500 Sobic001G468700--Sobic004G028500 Sobic001G017300 Sobic001G017300 Sobic001G468700--Sobic001G017300 Sobic009G121000 Sobic009G121000 Sobic001G468700--Sobic009G121000 Sobic003G247400 Sobic003G247400 Sobic001G468700--Sobic003G247400 Sobic003G313300 Sobic003G313300 Sobic001G468700--Sobic003G313300 Sobic003G276300 Sobic003G276300 Sobic001G468700--Sobic003G276300 Sobic003G004200 Sobic003G004200 Sobic001G468700--Sobic003G004200 Sobic010G002700--Sobic003G017100 Sobic001G169900 Sobic001G169900 Sobic010G002700--Sobic001G169900 Sobic005G118400 Sobic005G118400 Sobic010G002700--Sobic005G118400 Sobic010G043800 Sobic010G043800 Sobic010G002700--Sobic010G043800 Sobic001G378100 Sobic001G378100 Sobic010G002700--Sobic001G378100 Sobic007G136200 Sobic007G136200 Sobic010G002700--Sobic007G136200 Sobic010G002700--Sobic003G276300 Sobic001G198100 Sobic001G198100 Sobic010G002700--Sobic001G198100 Sobic001G530900 Sobic001G530900 Sobic010G002700--Sobic001G530900 Sobic002G006600 Sobic002G006600 Sobic003G017100--Sobic002G006600 Sobic003G017100--Sobic010G002700 Sobic003G017100--Sobic001G198100 Sobic003G017100--Sobic003G276300 Sobic003G017100--Sobic001G169900 Sobic003G017100--Sobic003G313300 Sobic003G017100--Sobic001G468700 Sobic003G017100--Sobic003G247400 Sobic003G191700 Sobic003G191700 Sobic003G017100--Sobic003G191700 Sobic004G028500--Sobic001G468700 Sobic004G028500--Sobic003G313300 Sobic001G100100 Sobic001G100100 Sobic004G028500--Sobic001G100100 Sobic004G028500--Sobic003G017100 Sobic004G028500--Sobic010G002700 Sobic005G045000 Sobic005G045000 Sobic004G028500--Sobic005G045000 Sobic004G028500--Sobic002G006600 Sobic004G028500--Sobic003G004200 Sobic004G028500--Sobic001G198100 Sobic006G158100 Sobic006G158100 Sobic001G017300--Sobic006G158100 Sobic004G356400 Sobic004G356400 Sobic001G017300--Sobic004G356400 Sobic006G093800 Sobic006G093800 Sobic001G017300--Sobic006G093800 Sobic010G249700 Sobic010G249700 Sobic001G017300--Sobic010G249700 Sobic001G017300--Sobic007G136200 Sobic001G017300--Sobic003G276300 Sobic005G101200 Sobic005G101200 Sobic001G017300--Sobic005G101200 Sobic001G017300--Sobic001G169900 Sobic001G017300--Sobic010G002700 Sobic009G121000--Sobic010G043800 Sobic005G063000 Sobic005G063000 Sobic009G121000--Sobic005G063000 Sobic009G121000--Sobic003G247400 Sobic009G121000--Sobic001G198100 Sobic006G142600 Sobic006G142600 Sobic009G121000--Sobic006G142600 Sobic003G160800 Sobic003G160800 Sobic009G121000--Sobic003G160800 Sobic009G121000--Sobic003G276300 Sobic007G103400 Sobic007G103400 Sobic009G121000--Sobic007G103400 Sobic009G121000--Sobic010G002700 Sobic003G247400--Sobic001G198100 Sobic003G247400--Sobic003G276300 Sobic003G247400--Sobic009G121000 Sobic003G247400--Sobic010G043800 Sobic003G247400--Sobic010G002700 Sobic003G247400--Sobic003G017100 Sobic007G185700 Sobic007G185700 Sobic003G247400--Sobic007G185700 Sobic003G247400--Sobic007G136200 Sobic003G247400--Sobic001G468700 Sobic003G313300--Sobic003G017100 Sobic003G313300--Sobic003G191700 Sobic010G176200 Sobic010G176200 Sobic003G313300--Sobic010G176200 Sobic007G047400 Sobic007G047400 Sobic003G313300--Sobic007G047400 Sobic003G313300--Sobic004G028500 Sobic003G313300--Sobic001G017300 Sobic003G313300--Sobic001G468700 Sobic003G313300--Sobic010G002700 Sobic005G206300 Sobic005G206300 Sobic003G313300--Sobic005G206300 Sobic003G276300--Sobic010G002700 Sobic003G276300--Sobic001G017300 Sobic003G276300--Sobic003G017100 Sobic003G276300--Sobic003G247400 Sobic003G276300--Sobic006G142600 Sobic003G276300--Sobic001G169900 Sobic003G276300--Sobic010G043800 Sobic003G276300--Sobic001G198100 Sobic003G276300--Sobic007G136200 Sobic003G004200--Sobic001G468700 Sobic003G009700 Sobic003G009700 Sobic003G004200--Sobic003G009700 Sobic003G004200--Sobic004G028500 Sobic001G065600 Sobic001G065600 Sobic003G004200--Sobic001G065600 Sobic003G004200--Sobic004G356400 Sobic003G004200--Sobic003G313300 Sobic003G004200--Sobic005G045000 Sobic003G004200--Sobic005G206300 Sobic003G004200--Sobic001G017300
Octagon: transcription factors


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