Gene annotation
Transcriptome id Sobic.005G198000.1
Synonym Sb05g025510
Functional annotation armadillo/beta-catenin-like repeat family protein, expressed
UniProt C5Y6Z4
Pfam PF00514
Panther DB PTHR15651 PTHR15651:SF7
NCBI CDD KOG1293; Proteins containing armadillo/beta-catenin-like repeat
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G51350 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os11g41990.1 : armadillo/beta-catenin-like repeat family protein, expressed
MaizeGDB (Corn) Zm00025a029248 , Zm00025a015906 , Zm00025a042899
Brachypodium PNT63147 , KQJ87580 , KQJ87581
Barley HORVU4Hr1G031740.1 , HORVU4Hr1G031740.3 , HORVU4Hr1G031740.2 , HORVU4Hr1G031740.5 , HORVU4Hr1G031740.4 , HORVU4Hr1G031740.6
Wheat TraesCS4B02G145300 , TraesCS4B02G145300 , TraesCS4A02G149700 , TraesCS4B02G145300 , TraesCS4D02G152700 , TraesCS4D02G152700 , TraesCS4A02G149700 , TraesCS4A02G149700 , TraesCS4B02G145300
Populus -


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cDNA sequences
Sobic.005G198000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G170200 zinc finger family protein, putative, expressed -
2 Sobic.004G355700 C2 domain containing protein, putative, expressed -
3 Sobic.002G408200 sec8 exocyst complex component specific domain containing protein, expressed K06111: EXOC4, exocyst complex component 4
4 Sobic.001G085600 ABC transporter, ATP-binding protein, putative, expressed -
5 Sobic.008G168300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tentative name(PubMedID : 31536532)@nuclear transcription factor Y subunit, putative, expressed K08064: NFYA, nuclear transcription factor Y, alpha
6 Sobic.002G121600 myb-like DNA-binding domain containing protein, expressed -
7 Sobic.001G283600 NTMC2Type1.2 protein, putative, expressed -
8 Sobic.010G243900 OsFBO9 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
9 Sobic.010G032900 transketolase, putative, expressed K01662: 1-deoxy-D-xylulose-5-phosphate synthase
10 Sobic.004G131800 sirohydrochlorin ferrochelatase, putative, expressed -
11 Sobic.009G256400 ATP binding protein, putative, expressed K15192: BTAF1, TATA-binding protein-associated factor
12 Sobic.003G262200 E3 ubiquitin ligase, putative, expressed K16276: K16276, zinc finger protein-like protein
13 Sobic.010G034100 GTP-binding protein GUF1, putative, expressed -
14 Sobic.003G011300 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
15 Sobic.001G384300 myb-like DNA-binding domain containing protein, expressed -
16 Sobic.003G234900 radical SAM enzyme, putative, expressed K06941: 23S rRNA (adenine2503-C2)-methyltransferase
17 Sobic.003G176000 lipase family protein, putative, expressed -
18 Sobic.002G188600 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
19 Sobic.002G325300 acyltransferase, putative, expressed K13506: GPAT3_4, AGPAT9, glycerol-3-phosphate O-acyltransferase 3/4
20 Sobic.004G042200 OsFBO8 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL


Gene co-expression network
sample Sobic005G198000 Sobic005G198000 Sobic002G170200 Sobic002G170200 Sobic005G198000--Sobic002G170200 Sobic004G355700 Sobic004G355700 Sobic005G198000--Sobic004G355700 Sobic002G408200 Sobic002G408200 Sobic005G198000--Sobic002G408200 Sobic001G085600 Sobic001G085600 Sobic005G198000--Sobic001G085600 Sobic008G168300 Sobic008G168300 Sobic005G198000--Sobic008G168300 Sobic002G121600 Sobic002G121600 Sobic005G198000--Sobic002G121600 Sobic001G283600 Sobic001G283600 Sobic005G198000--Sobic001G283600 Sobic010G243900 Sobic010G243900 Sobic005G198000--Sobic010G243900 Sobic010G032900 Sobic010G032900 Sobic005G198000--Sobic010G032900 Sobic004G131800 Sobic004G131800 Sobic002G170200--Sobic004G131800 Sobic002G170200--Sobic001G283600 Sobic003G176000 Sobic003G176000 Sobic002G170200--Sobic003G176000 Sobic002G170200--Sobic005G198000 Sobic006G056700 Sobic006G056700 Sobic002G170200--Sobic006G056700 Sobic006G127600 Sobic006G127600 Sobic002G170200--Sobic006G127600 Sobic006G039400 Sobic006G039400 Sobic002G170200--Sobic006G039400 Sobic007G162100 Sobic007G162100 Sobic002G170200--Sobic007G162100 Sobic006G261400 Sobic006G261400 Sobic002G170200--Sobic006G261400 Sobic003G271400 Sobic003G271400 Sobic004G355700--Sobic003G271400 Sobic001G212300 Sobic001G212300 Sobic004G355700--Sobic001G212300 Sobic004G337400 Sobic004G337400 Sobic004G355700--Sobic004G337400 Sobic004G042200 Sobic004G042200 Sobic004G355700--Sobic004G042200 Sobic004G355700--Sobic005G198000 Sobic004G355700--Sobic008G168300 Sobic003G276300 Sobic003G276300 Sobic004G355700--Sobic003G276300 Sobic005G106600 Sobic005G106600 Sobic004G355700--Sobic005G106600 Sobic003G191700 Sobic003G191700 Sobic004G355700--Sobic003G191700 Sobic008G028700 Sobic008G028700 Sobic002G408200--Sobic008G028700 Sobic005G013200 Sobic005G013200 Sobic002G408200--Sobic005G013200 Sobic002G103600 Sobic002G103600 Sobic002G408200--Sobic002G103600 Sobic007G008900 Sobic007G008900 Sobic002G408200--Sobic007G008900 Sobic003G052200 Sobic003G052200 Sobic002G408200--Sobic003G052200 Sobic001G161800 Sobic001G161800 Sobic002G408200--Sobic001G161800 Sobic010G279450 Sobic010G279450 Sobic002G408200--Sobic010G279450 Sobic003G059750 Sobic003G059750 Sobic002G408200--Sobic003G059750 Sobic001G451400 Sobic001G451400 Sobic002G408200--Sobic001G451400 Sobic005G100600 Sobic005G100600 Sobic001G085600--Sobic005G100600 Sobic004G193700 Sobic004G193700 Sobic001G085600--Sobic004G193700 Sobic001G261545 Sobic001G261545 Sobic001G085600--Sobic001G261545 Sobic006G092000 Sobic006G092000 Sobic001G085600--Sobic006G092000 Sobic002G309900 Sobic002G309900 Sobic001G085600--Sobic002G309900 Sobic001G203400 Sobic001G203400 Sobic001G085600--Sobic001G203400 Sobic002G218500 Sobic002G218500 Sobic001G085600--Sobic002G218500 Sobic001G085600--Sobic005G198000 Sobic003G319800 Sobic003G319800 Sobic001G085600--Sobic003G319800 Sobic008G168300--Sobic004G355700 Sobic001G017300 Sobic001G017300 Sobic008G168300--Sobic001G017300 Sobic008G168300--Sobic002G121600 Sobic005G045000 Sobic005G045000 Sobic008G168300--Sobic005G045000 Sobic003G229300 Sobic003G229300 Sobic008G168300--Sobic003G229300 Sobic001G468700 Sobic001G468700 Sobic008G168300--Sobic001G468700 Sobic010G085100 Sobic010G085100 Sobic008G168300--Sobic010G085100 Sobic001G239500 Sobic001G239500 Sobic008G168300--Sobic001G239500 Sobic001G514800 Sobic001G514800 Sobic008G168300--Sobic001G514800 Sobic001G356500 Sobic001G356500 Sobic002G121600--Sobic001G356500 Sobic009G191100 Sobic009G191100 Sobic002G121600--Sobic009G191100 Sobic002G133400 Sobic002G133400 Sobic002G121600--Sobic002G133400 Sobic003G148000 Sobic003G148000 Sobic002G121600--Sobic003G148000 Sobic002G343901 Sobic002G343901 Sobic002G121600--Sobic002G343901 Sobic001G456900 Sobic001G456900 Sobic002G121600--Sobic001G456900 Sobic003G332800 Sobic003G332800 Sobic002G121600--Sobic003G332800 Sobic007G065400 Sobic007G065400 Sobic002G121600--Sobic007G065400 Sobic008G113100 Sobic008G113100 Sobic002G121600--Sobic008G113100 Sobic001G283600--Sobic007G162100 Sobic010G034100 Sobic010G034100 Sobic001G283600--Sobic010G034100 Sobic008G048300 Sobic008G048300 Sobic001G283600--Sobic008G048300 Sobic001G283600--Sobic002G170200 Sobic001G283600--Sobic006G127600 Sobic001G283600--Sobic006G039400 Sobic008G033500 Sobic008G033500 Sobic001G283600--Sobic008G033500 Sobic006G093300 Sobic006G093300 Sobic001G283600--Sobic006G093300 Sobic008G082500 Sobic008G082500 Sobic001G283600--Sobic008G082500 Sobic001G046200 Sobic001G046200 Sobic010G243900--Sobic001G046200 Sobic010G243900--Sobic004G042200 Sobic010G149200 Sobic010G149200 Sobic010G243900--Sobic010G149200 Sobic010G243900--Sobic001G161800 Sobic003G398700 Sobic003G398700 Sobic010G243900--Sobic003G398700 Sobic010G243900--Sobic008G113100 Sobic010G021500 Sobic010G021500 Sobic010G243900--Sobic010G021500 Sobic002G029900 Sobic002G029900 Sobic010G243900--Sobic002G029900 Sobic002G042800 Sobic002G042800 Sobic010G243900--Sobic002G042800 Sobic005G059800 Sobic005G059800 Sobic010G032900--Sobic005G059800 Sobic010G139000 Sobic010G139000 Sobic010G032900--Sobic010G139000 Sobic003G170900 Sobic003G170900 Sobic010G032900--Sobic003G170900 Sobic001G194200 Sobic001G194200 Sobic010G032900--Sobic001G194200 Sobic001G002000 Sobic001G002000 Sobic010G032900--Sobic001G002000 Sobic003G011300 Sobic003G011300 Sobic010G032900--Sobic003G011300 Sobic004G291900 Sobic004G291900 Sobic010G032900--Sobic004G291900 Sobic002G294800 Sobic002G294800 Sobic010G032900--Sobic002G294800 Sobic002G134200 Sobic002G134200 Sobic010G032900--Sobic002G134200
Octagon: transcription factors


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