Gene annotation
Transcriptome id Sobic.001G060100.5,Sobic.001G060100.4,Sobic.001G060100.2,Sobic.001G060100.1,Sobic.001G060100.3
Synonym Sb01g005460
Functional annotation CK1_CaseinKinase_1a.4 - CK1 includes the casein kinase 1 kinases, expressed
UniProt A0A1Z5S4K3 , A0A1Z5S4Z7 , C5WY18
Pfam PF00069
Panther DB PTHR11909 PTHR11909:SF131
NCBI CDD KOG1164; Casein kinase (serine/threonine/tyrosine protein kinase)
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G03940 : Protein kinase family protein
RAP-DB (Rice) LOC_Os03g57940.2,LOC_Os03g57940.1 : CK1_CaseinKinase_1a.4 - CK1 includes the casein kinase 1 kinases, expressed
MaizeGDB (Corn) Zm00025a026374 , Zm00025a048249 , Zm00025a045115 , Zm00025a016096 , Zm00025a026609
Brachypodium PNT76960 , KQK20700 , KQK12780 , KQK12783 , KQK12782 , KQK20699 , PNT76959
Barley HORVU6Hr1G077100.9 , HORVU6Hr1G077100.8 , HORVU6Hr1G077100.7 , HORVU6Hr1G077100.6 , HORVU6Hr1G077100.5 , HORVU6Hr1G077100.4 , HORVU6Hr1G077100.3 , HORVU6Hr1G077100.2 , HORVU6Hr1G077100.1 , HORVU5Hr1G104450.6 , HORVU5Hr1G104450.5 , HORVU5Hr1G104450.4 , HORVU5Hr1G104450.3 , HORVU5Hr1G104450.2 , HORVU5Hr1G104450.1
Wheat TraesCS5D02G438800 , TraesCS2A02G238600 , TraesCS2A02G238600 , TraesCS2A02G238600 , TraesCS2A02G238600 , TraesCS5D02G439600 , TraesCS5B02G433300 , TraesCS5B02G433300 , TraesCS2D02G239500 , TraesCS2D02G239500 , TraesCS2D02G239500 , TraesCS2D02G239500 , TraesCS5A02G431600 , TraesCS2B02G260100
Populus PNT55376 , PNT55377


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G011900 expressed protein -
2 Sobic.001G198100 PAP fibrillin family domain containing protein, expressed -
3 Sobic.003G057233 - -
4 Sobic.001G054000 WD domain, G-beta repeat domain containing protein, expressed K14003: PREB, prolactin regulatory element-binding protein
5 Sobic.001G169900 seed maturation protein PM23, putative, expressed -
6 Sobic.010G043800 uncharacterized protein ycf45, putative, expressed -
7 Sobic.009G121000 expressed protein -
8 Sobic.006G142600 lipase class 3 family protein, putative, expressed -
9 Sobic.001G528800 cell cycle control protein, putative, expressed -
10 Sobic.002G138100 ACT domain containing protein, expressed -
11 Sobic.002G006600 -(PubMedID : 26976818)@aminotransferase, classes I and II, domain containing protein, expressed K14272: glutamate--glyoxylate aminotransferase
12 Sobic.010G002700 expressed protein -
13 Sobic.001G098301 - -
14 Sobic.007G058001 - K15429: TRM5, tRNA (guanine37-N1)-methyltransferase
15 Sobic.001G394800 tetratricopeptide repeat domain containing protein, expressed -
16 Sobic.010G243900 OsFBO9 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
17 Sobic.003G017100 ABC transporter, ATP-binding protein, putative, expressed -
18 Sobic.003G276300 zinc knuckle domain containing protein, expressed -
19 Sobic.003G136900 helix-loop-helix DNA-binding domain containing protein, expressed K12126: phytochrome-interacting factor 3
20 Sobic.001G035900 expressed protein K13156: U11/U12 small nuclear ribonucleoprotein 48 kDa protein


Gene co-expression network
sample Sobic001G060100 Sobic001G060100 Sobic003G011900 Sobic003G011900 Sobic001G060100--Sobic003G011900 Sobic001G198100 Sobic001G198100 Sobic001G060100--Sobic001G198100 Sobic003G057233 Sobic003G057233 Sobic001G060100--Sobic003G057233 Sobic001G054000 Sobic001G054000 Sobic001G060100--Sobic001G054000 Sobic001G169900 Sobic001G169900 Sobic001G060100--Sobic001G169900 Sobic010G043800 Sobic010G043800 Sobic001G060100--Sobic010G043800 Sobic009G121000 Sobic009G121000 Sobic001G060100--Sobic009G121000 Sobic006G142600 Sobic006G142600 Sobic001G060100--Sobic006G142600 Sobic001G528800 Sobic001G528800 Sobic001G060100--Sobic001G528800 Sobic003G011900--Sobic001G060100 Sobic003G011900--Sobic001G198100 Sobic010G255700 Sobic010G255700 Sobic003G011900--Sobic010G255700 Sobic003G011900--Sobic003G057233 Sobic010G243900 Sobic010G243900 Sobic003G011900--Sobic010G243900 Sobic003G011900--Sobic001G169900 Sobic004G258700 Sobic004G258700 Sobic003G011900--Sobic004G258700 Sobic006G079400 Sobic006G079400 Sobic003G011900--Sobic006G079400 Sobic002G006600 Sobic002G006600 Sobic003G011900--Sobic002G006600 Sobic003G017100 Sobic003G017100 Sobic001G198100--Sobic003G017100 Sobic003G247400 Sobic003G247400 Sobic001G198100--Sobic003G247400 Sobic001G198100--Sobic001G169900 Sobic010G002700 Sobic010G002700 Sobic001G198100--Sobic010G002700 Sobic001G198100--Sobic002G006600 Sobic001G198100--Sobic010G043800 Sobic001G198100--Sobic009G121000 Sobic003G276300 Sobic003G276300 Sobic001G198100--Sobic003G276300 Sobic001G198100--Sobic006G142600 Sobic001G394800 Sobic001G394800 Sobic003G057233--Sobic001G394800 Sobic003G057233--Sobic001G169900 Sobic003G057233--Sobic001G198100 Sobic003G057233--Sobic003G017100 Sobic003G057233--Sobic004G258700 Sobic010G248700 Sobic010G248700 Sobic003G057233--Sobic010G248700 Sobic010G132600 Sobic010G132600 Sobic003G057233--Sobic010G132600 Sobic003G057233--Sobic010G002700 Sobic006G219150 Sobic006G219150 Sobic003G057233--Sobic006G219150 Sobic002G005600 Sobic002G005600 Sobic001G054000--Sobic002G005600 Sobic003G003450 Sobic003G003450 Sobic001G054000--Sobic003G003450 Sobic003G220100 Sobic003G220100 Sobic001G054000--Sobic003G220100 Sobic001G540600 Sobic001G540600 Sobic001G054000--Sobic001G540600 Sobic001G054000--Sobic010G043800 Sobic001G054000--Sobic001G169900 Sobic009G103000 Sobic009G103000 Sobic001G054000--Sobic009G103000 Sobic001G054000--Sobic001G394800 Sobic009G207900 Sobic009G207900 Sobic001G054000--Sobic009G207900 Sobic001G169900--Sobic010G002700 Sobic006G158100 Sobic006G158100 Sobic001G169900--Sobic006G158100 Sobic001G169900--Sobic010G043800 Sobic007G136200 Sobic007G136200 Sobic001G169900--Sobic007G136200 Sobic001G169900--Sobic001G198100 Sobic001G169900--Sobic006G142600 Sobic001G169900--Sobic001G394800 Sobic001G017300 Sobic001G017300 Sobic001G169900--Sobic001G017300 Sobic001G169900--Sobic003G017100 Sobic010G043800--Sobic009G121000 Sobic010G043800--Sobic007G136200 Sobic001G504400 Sobic001G504400 Sobic010G043800--Sobic001G504400 Sobic010G043800--Sobic006G142600 Sobic010G043800--Sobic010G002700 Sobic010G043800--Sobic006G158100 Sobic007G103400 Sobic007G103400 Sobic010G043800--Sobic007G103400 Sobic010G043800--Sobic001G169900 Sobic001G378100 Sobic001G378100 Sobic010G043800--Sobic001G378100 Sobic009G121000--Sobic010G043800 Sobic005G063000 Sobic005G063000 Sobic009G121000--Sobic005G063000 Sobic009G121000--Sobic003G247400 Sobic009G121000--Sobic001G198100 Sobic009G121000--Sobic006G142600 Sobic003G160800 Sobic003G160800 Sobic009G121000--Sobic003G160800 Sobic009G121000--Sobic003G276300 Sobic009G121000--Sobic007G103400 Sobic009G121000--Sobic010G002700 Sobic006G142600--Sobic010G043800 Sobic003G306200 Sobic003G306200 Sobic006G142600--Sobic003G306200 Sobic006G142600--Sobic007G103400 Sobic007G108900 Sobic007G108900 Sobic006G142600--Sobic007G108900 Sobic006G142600--Sobic007G136200 Sobic006G142600--Sobic001G169900 Sobic006G142600--Sobic006G158100 Sobic002G198300 Sobic002G198300 Sobic006G142600--Sobic002G198300 Sobic003G094100 Sobic003G094100 Sobic006G142600--Sobic003G094100 Sobic004G069000 Sobic004G069000 Sobic001G528800--Sobic004G069000 Sobic001G198400 Sobic001G198400 Sobic001G528800--Sobic001G198400 Sobic001G528800--Sobic001G378100 Sobic001G530900 Sobic001G530900 Sobic001G528800--Sobic001G530900 Sobic001G528800--Sobic010G002700 Sobic001G345100 Sobic001G345100 Sobic001G528800--Sobic001G345100 Sobic004G143300 Sobic004G143300 Sobic001G528800--Sobic004G143300 Sobic008G033000 Sobic008G033000 Sobic001G528800--Sobic008G033000 Sobic004G042200 Sobic004G042200 Sobic001G528800--Sobic004G042200
Octagon: transcription factors


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