Gene annotation
Transcriptome id Sobic.001G098301.1
Synonym -
Functional annotation -
UniProt A0A1Z5S5F4
Pfam PF01926
Panther DB PTHR11089 PTHR11089:SF39
NCBI CDD KOG1424; Predicted GTP-binding protein MMR1
KEGG Orthology -
Gene Ontology GO:0005525; GTP binding


Orthologs (automatic annotation)
TAIR AT1G08410 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os12g42370.1 : GTPase of unknown function domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a004725
Brachypodium KQJ85744
Barley HORVU5Hr1G092800.9 , HORVU5Hr1G092800.1 , HORVU5Hr1G092800.2 , HORVU5Hr1G092800.3 , HORVU5Hr1G092800.4 , HORVU5Hr1G092800.5 , HORVU5Hr1G092800.6 , HORVU5Hr1G092800.7 , HORVU5Hr1G007910.10 , HORVU5Hr1G092800.12 , HORVU5Hr1G092800.13 , HORVU5Hr1G092800.10 , HORVU5Hr1G092800.11 , HORVU5Hr1G092800.14 , HORVU5Hr1G092800.15 , HORVU5Hr1G007910.4 , HORVU5Hr1G007910.5 , HORVU5Hr1G007910.6 , HORVU5Hr1G007910.7 , HORVU5Hr1G007910.1 , HORVU5Hr1G007910.2 , HORVU5Hr1G007910.3 , HORVU5Hr1G007910.8 , HORVU5Hr1G007910.9
Wheat TraesCS5B02G028700
Populus PNT19052 , PNT19051


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G043800 uncharacterized protein ycf45, putative, expressed -
2 Sobic.004G001300 -(PubMedID : 26976818)@erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15893: glycerate dehydrogenase
3 Sobic.005G188600 - -
4 Sobic.001G048400 pheophorbide a oxygenase, chloroplast precursor, putative, expressed -
5 Sobic.009G121000 expressed protein -
6 Sobic.006G038500 tRNA-dihydrouridine synthase, putative, expressed K05539: tRNA-dihydrouridine synthase A
7 Sobic.002G000600 glycosyl transferase, group 1 domain containing protein, expressed K06119: sulfoquinovosyltransferase
8 Sobic.006G101500 expressed protein -
9 Sobic.007G150100 HD domain containing protein, putative, expressed -
10 Sobic.003G068800 Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
11 Sobic.001G003200 RNApolymerase sigma-subunit F(PubMedID : 26465154)@RNA polymerase sigma factor, putative, expressed K03086: RNA polymerase primary sigma factor
12 Sobic.001G465700 aminotransferase, putative, expressed K00833: adenosylmethionine---8-amino-7-oxononanoate aminotransferase
13 Sobic.003G442700 - -
14 Sobic.001G065600 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase
15 Sobic.004G298900 OR, putative, expressed -
16 Sobic.006G031800 - -
17 Sobic.002G347600 pentatricopeptide containing protein, putative, expressed -
18 Sobic.007G204900 extracellular ligand-gated ion channel, putative, expressed -
19 Sobic.004G034800 OsFBX440 - F-box domain containing protein, expressed -
20 Sobic.009G056700 6PF-2-K/Fru-2,6-P2ASE liver isozyme, putative, expressed K01103: 6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 3


Gene co-expression network
sample Sobic001G098301 Sobic001G098301 Sobic010G043800 Sobic010G043800 Sobic001G098301--Sobic010G043800 Sobic004G001300 Sobic004G001300 Sobic001G098301--Sobic004G001300 Sobic005G188600 Sobic005G188600 Sobic001G098301--Sobic005G188600 Sobic001G048400 Sobic001G048400 Sobic001G098301--Sobic001G048400 Sobic009G121000 Sobic009G121000 Sobic001G098301--Sobic009G121000 Sobic006G038500 Sobic006G038500 Sobic001G098301--Sobic006G038500 Sobic002G000600 Sobic002G000600 Sobic001G098301--Sobic002G000600 Sobic006G101500 Sobic006G101500 Sobic001G098301--Sobic006G101500 Sobic007G150100 Sobic007G150100 Sobic001G098301--Sobic007G150100 Sobic010G043800--Sobic009G121000 Sobic007G136200 Sobic007G136200 Sobic010G043800--Sobic007G136200 Sobic001G504400 Sobic001G504400 Sobic010G043800--Sobic001G504400 Sobic006G142600 Sobic006G142600 Sobic010G043800--Sobic006G142600 Sobic010G002700 Sobic010G002700 Sobic010G043800--Sobic010G002700 Sobic006G158100 Sobic006G158100 Sobic010G043800--Sobic006G158100 Sobic007G103400 Sobic007G103400 Sobic010G043800--Sobic007G103400 Sobic001G169900 Sobic001G169900 Sobic010G043800--Sobic001G169900 Sobic001G378100 Sobic001G378100 Sobic010G043800--Sobic001G378100 Sobic001G118100 Sobic001G118100 Sobic004G001300--Sobic001G118100 Sobic007G204900 Sobic007G204900 Sobic004G001300--Sobic007G204900 Sobic008G001000 Sobic008G001000 Sobic004G001300--Sobic008G001000 Sobic003G442700 Sobic003G442700 Sobic004G001300--Sobic003G442700 Sobic003G161000 Sobic003G161000 Sobic004G001300--Sobic003G161000 Sobic004G001300--Sobic001G098301 Sobic003G003600 Sobic003G003600 Sobic004G001300--Sobic003G003600 Sobic003G137100 Sobic003G137100 Sobic004G001300--Sobic003G137100 Sobic001G060401 Sobic001G060401 Sobic004G001300--Sobic001G060401 Sobic001G065600 Sobic001G065600 Sobic005G188600--Sobic001G065600 Sobic001G158900 Sobic001G158900 Sobic005G188600--Sobic001G158900 Sobic006G188000 Sobic006G188000 Sobic005G188600--Sobic006G188000 Sobic003G443500 Sobic003G443500 Sobic005G188600--Sobic003G443500 Sobic006G114900 Sobic006G114900 Sobic005G188600--Sobic006G114900 Sobic005G188600--Sobic006G101500 Sobic008G115900 Sobic008G115900 Sobic005G188600--Sobic008G115900 Sobic005G188600--Sobic001G098301 Sobic006G160400 Sobic006G160400 Sobic005G188600--Sobic006G160400 Sobic003G398800 Sobic003G398800 Sobic001G048400--Sobic003G398800 Sobic009G056700 Sobic009G056700 Sobic001G048400--Sobic009G056700 Sobic001G048400--Sobic007G103400 Sobic003G431700 Sobic003G431700 Sobic001G048400--Sobic003G431700 Sobic001G048400--Sobic010G043800 Sobic001G048400--Sobic001G504400 Sobic001G048400--Sobic009G121000 Sobic001G048400--Sobic006G101500 Sobic006G238200 Sobic006G238200 Sobic001G048400--Sobic006G238200 Sobic009G121000--Sobic010G043800 Sobic005G063000 Sobic005G063000 Sobic009G121000--Sobic005G063000 Sobic003G247400 Sobic003G247400 Sobic009G121000--Sobic003G247400 Sobic001G198100 Sobic001G198100 Sobic009G121000--Sobic001G198100 Sobic009G121000--Sobic006G142600 Sobic003G160800 Sobic003G160800 Sobic009G121000--Sobic003G160800 Sobic003G276300 Sobic003G276300 Sobic009G121000--Sobic003G276300 Sobic009G121000--Sobic007G103400 Sobic009G121000--Sobic010G002700 Sobic002G347600 Sobic002G347600 Sobic006G038500--Sobic002G347600 Sobic001G465700 Sobic001G465700 Sobic006G038500--Sobic001G465700 Sobic004G120100 Sobic004G120100 Sobic006G038500--Sobic004G120100 Sobic001G126300 Sobic001G126300 Sobic006G038500--Sobic001G126300 Sobic003G141100 Sobic003G141100 Sobic006G038500--Sobic003G141100 Sobic006G128300 Sobic006G128300 Sobic006G038500--Sobic006G128300 Sobic001G516901 Sobic001G516901 Sobic006G038500--Sobic001G516901 Sobic003G232700 Sobic003G232700 Sobic006G038500--Sobic003G232700 Sobic006G038500--Sobic003G160800 Sobic002G000600--Sobic003G232700 Sobic004G178100 Sobic004G178100 Sobic002G000600--Sobic004G178100 Sobic002G000600--Sobic003G141100 Sobic008G062400 Sobic008G062400 Sobic002G000600--Sobic008G062400 Sobic006G197300 Sobic006G197300 Sobic002G000600--Sobic006G197300 Sobic007G023200 Sobic007G023200 Sobic002G000600--Sobic007G023200 Sobic002G000600--Sobic001G516901 Sobic004G328400 Sobic004G328400 Sobic002G000600--Sobic004G328400 Sobic001G500600 Sobic001G500600 Sobic002G000600--Sobic001G500600 Sobic003G387100 Sobic003G387100 Sobic006G101500--Sobic003G387100 Sobic002G102200 Sobic002G102200 Sobic006G101500--Sobic002G102200 Sobic001G183000 Sobic001G183000 Sobic006G101500--Sobic001G183000 Sobic004G211600 Sobic004G211600 Sobic006G101500--Sobic004G211600 Sobic001G134700 Sobic001G134700 Sobic006G101500--Sobic001G134700 Sobic006G101500--Sobic003G431700 Sobic003G412900 Sobic003G412900 Sobic006G101500--Sobic003G412900 Sobic006G093900 Sobic006G093900 Sobic006G101500--Sobic006G093900 Sobic008G006100 Sobic008G006100 Sobic006G101500--Sobic008G006100 Sobic001G003200 Sobic001G003200 Sobic007G150100--Sobic001G003200 Sobic006G173600 Sobic006G173600 Sobic007G150100--Sobic006G173600 Sobic007G150100--Sobic001G048400 Sobic007G150100--Sobic001G504400 Sobic007G150100--Sobic010G043800 Sobic007G150100--Sobic009G056700 Sobic007G150100--Sobic001G169900 Sobic007G150100--Sobic003G398800 Sobic003G110800 Sobic003G110800 Sobic007G150100--Sobic003G110800
Octagon: transcription factors


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