Gene annotation
Transcriptome id Sobic.002G031600.1,Sobic.002G031600.2
Synonym Sb02g002780
Functional annotation cadmium-induced protein, putative, expressed
UniProt A0A1B6Q903 , A0A1B6Q8Y6
Pfam -
Panther DB PTHR36778
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G19070 : Putative membrane lipoprotein
RAP-DB (Rice) LOC_Os07g05040.1 : cadmium-induced protein, putative, expressed
MaizeGDB (Corn) Zm00025a044996
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G121000 expressed protein -
2 Sobic.009G191100 expressed protein -
3 Sobic.008G167700 expressed protein -
4 Sobic.002G347600 pentatricopeptide containing protein, putative, expressed -
5 Sobic.002G172700 Galactose mutarotase-like superfamily protein(PubMedID : 26465154)@aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
6 Sobic.001G420300 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
7 Sobic.010G043800 uncharacterized protein ycf45, putative, expressed -
8 Sobic.001G198100 PAP fibrillin family domain containing protein, expressed -
9 Sobic.003G011900 expressed protein -
10 Sobic.003G247400 OsCttP1 - Putative C-terminal processing peptidase homologue, expressed -
11 Sobic.006G142600 lipase class 3 family protein, putative, expressed -
12 Sobic.008G062500 -(PubMedID : 26976818)@glycine cleavage system H protein, putative, expressed K02437: gcvH, glycine cleavage system H protein
13 Sobic.003G412900 NAD(P)H dehydrogenase 18(PubMedID : 26465154)@Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
14 Sobic.003G276300 zinc knuckle domain containing protein, expressed -
15 Sobic.001G069000 ribose-5-phosphate isomerase A, putative, expressed K01807: ribose 5-phosphate isomerase A
16 Sobic.008G062400 similar to Diphosphonucleotide phosphatase 1(PubMedID : 29862293)@inositol-1-monophosphatase, putative, expressed K15422: 3'(2'), 5'-bisphosphate nucleotidase / inositol polyphosphate 1-phosphatase
17 Sobic.001G468700 expressed protein -
18 Sobic.002G358500 - -
19 Sobic.002G359600 GA22009-PA, putative, expressed -
20 Sobic.001G169900 seed maturation protein PM23, putative, expressed -


Gene co-expression network
sample Sobic002G031600 Sobic002G031600 Sobic009G121000 Sobic009G121000 Sobic002G031600--Sobic009G121000 Sobic009G191100 Sobic009G191100 Sobic002G031600--Sobic009G191100 Sobic008G167700 Sobic008G167700 Sobic002G031600--Sobic008G167700 Sobic002G347600 Sobic002G347600 Sobic002G031600--Sobic002G347600 Sobic002G172700 Sobic002G172700 Sobic002G031600--Sobic002G172700 Sobic001G420300 Sobic001G420300 Sobic002G031600--Sobic001G420300 Sobic010G043800 Sobic010G043800 Sobic002G031600--Sobic010G043800 Sobic001G198100 Sobic001G198100 Sobic002G031600--Sobic001G198100 Sobic003G011900 Sobic003G011900 Sobic002G031600--Sobic003G011900 Sobic009G121000--Sobic010G043800 Sobic005G063000 Sobic005G063000 Sobic009G121000--Sobic005G063000 Sobic003G247400 Sobic003G247400 Sobic009G121000--Sobic003G247400 Sobic009G121000--Sobic001G198100 Sobic006G142600 Sobic006G142600 Sobic009G121000--Sobic006G142600 Sobic003G160800 Sobic003G160800 Sobic009G121000--Sobic003G160800 Sobic003G276300 Sobic003G276300 Sobic009G121000--Sobic003G276300 Sobic007G103400 Sobic007G103400 Sobic009G121000--Sobic007G103400 Sobic010G002700 Sobic010G002700 Sobic009G121000--Sobic010G002700 Sobic002G358500 Sobic002G358500 Sobic009G191100--Sobic002G358500 Sobic002G121600 Sobic002G121600 Sobic009G191100--Sobic002G121600 Sobic007G113800 Sobic007G113800 Sobic009G191100--Sobic007G113800 Sobic004G182900 Sobic004G182900 Sobic009G191100--Sobic004G182900 Sobic004G299000 Sobic004G299000 Sobic009G191100--Sobic004G299000 Sobic009G191100--Sobic002G031600 Sobic007G173200 Sobic007G173200 Sobic009G191100--Sobic007G173200 Sobic002G228700 Sobic002G228700 Sobic009G191100--Sobic002G228700 Sobic004G258700 Sobic004G258700 Sobic009G191100--Sobic004G258700 Sobic008G167700--Sobic001G198100 Sobic008G167700--Sobic003G247400 Sobic002G006600 Sobic002G006600 Sobic008G167700--Sobic002G006600 Sobic008G167700--Sobic009G121000 Sobic003G017100 Sobic003G017100 Sobic008G167700--Sobic003G017100 Sobic008G167700--Sobic003G276300 Sobic008G167700--Sobic002G031600 Sobic008G167700--Sobic010G043800 Sobic008G167700--Sobic006G142600 Sobic006G038500 Sobic006G038500 Sobic002G347600--Sobic006G038500 Sobic003G301300 Sobic003G301300 Sobic002G347600--Sobic003G301300 Sobic004G336200 Sobic004G336200 Sobic002G347600--Sobic004G336200 Sobic008G091400 Sobic008G091400 Sobic002G347600--Sobic008G091400 Sobic006G128300 Sobic006G128300 Sobic002G347600--Sobic006G128300 Sobic002G347600--Sobic003G247400 Sobic003G141100 Sobic003G141100 Sobic002G347600--Sobic003G141100 Sobic004G328400 Sobic004G328400 Sobic002G347600--Sobic004G328400 Sobic002G347600--Sobic009G121000 Sobic007G136200 Sobic007G136200 Sobic002G172700--Sobic007G136200 Sobic010G153900 Sobic010G153900 Sobic002G172700--Sobic010G153900 Sobic007G140800 Sobic007G140800 Sobic002G172700--Sobic007G140800 Sobic003G024300 Sobic003G024300 Sobic002G172700--Sobic003G024300 Sobic008G115900 Sobic008G115900 Sobic002G172700--Sobic008G115900 Sobic009G104800 Sobic009G104800 Sobic002G172700--Sobic009G104800 Sobic004G125700 Sobic004G125700 Sobic002G172700--Sobic004G125700 Sobic001G514800 Sobic001G514800 Sobic002G172700--Sobic001G514800 Sobic001G468700 Sobic001G468700 Sobic002G172700--Sobic001G468700 Sobic003G412900 Sobic003G412900 Sobic001G420300--Sobic003G412900 Sobic001G069000 Sobic001G069000 Sobic001G420300--Sobic001G069000 Sobic003G137100 Sobic003G137100 Sobic001G420300--Sobic003G137100 Sobic001G420300--Sobic002G172700 Sobic008G062400 Sobic008G062400 Sobic001G420300--Sobic008G062400 Sobic001G314200 Sobic001G314200 Sobic001G420300--Sobic001G314200 Sobic001G420300--Sobic010G153900 Sobic003G371600 Sobic003G371600 Sobic001G420300--Sobic003G371600 Sobic003G387100 Sobic003G387100 Sobic001G420300--Sobic003G387100 Sobic010G043800--Sobic009G121000 Sobic010G043800--Sobic007G136200 Sobic001G504400 Sobic001G504400 Sobic010G043800--Sobic001G504400 Sobic010G043800--Sobic006G142600 Sobic010G043800--Sobic010G002700 Sobic006G158100 Sobic006G158100 Sobic010G043800--Sobic006G158100 Sobic010G043800--Sobic007G103400 Sobic001G169900 Sobic001G169900 Sobic010G043800--Sobic001G169900 Sobic001G378100 Sobic001G378100 Sobic010G043800--Sobic001G378100 Sobic001G198100--Sobic003G017100 Sobic001G198100--Sobic003G247400 Sobic001G198100--Sobic001G169900 Sobic001G198100--Sobic010G002700 Sobic001G198100--Sobic002G006600 Sobic001G198100--Sobic010G043800 Sobic001G198100--Sobic009G121000 Sobic001G198100--Sobic003G276300 Sobic001G198100--Sobic006G142600 Sobic001G060100 Sobic001G060100 Sobic003G011900--Sobic001G060100 Sobic003G011900--Sobic001G198100 Sobic010G255700 Sobic010G255700 Sobic003G011900--Sobic010G255700 Sobic003G057233 Sobic003G057233 Sobic003G011900--Sobic003G057233 Sobic010G243900 Sobic010G243900 Sobic003G011900--Sobic010G243900 Sobic003G011900--Sobic001G169900 Sobic003G011900--Sobic004G258700 Sobic006G079400 Sobic006G079400 Sobic003G011900--Sobic006G079400 Sobic003G011900--Sobic002G006600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.