Gene annotation
Transcriptome id Sobic.001G395500.1
Synonym SDG10, Sb01g037450, SWN, EZA1
Functional annotation SET domain containing protein, expressed
UniProt C5WMG6
Pfam PF00856
Panther DB PTHR22884 PTHR22884:SF237
NCBI CDD -
KEGG Orthology K11430; [histone H3]-lysine27 N-trimethyltransferase EZH2
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G02020 : SET domain-containing protein
RAP-DB (Rice) LOC_Os03g19480.1 : SET domain containing protein, expressed
MaizeGDB (Corn) Zm00025a002138 , Zm00025a050136 , Zm00025a052556 , Zm00025a037708
Brachypodium KQK22000
Barley HORVU4Hr1G053740.9 , HORVU4Hr1G053740.8 , HORVU4Hr1G053740.5 , HORVU4Hr1G053740.4 , HORVU4Hr1G053740.7 , HORVU4Hr1G053740.6 , HORVU4Hr1G053740.1 , HORVU4Hr1G053740.3 , HORVU4Hr1G053740.2 , HORVU3Hr1G007830.5 , HORVU3Hr1G007830.1 , HORVU3Hr1G007830.3 , HORVU4Hr1G053740.13 , HORVU4Hr1G053740.15 , HORVU4Hr1G053740.14 , HORVU4Hr1G053740.10 , HORVU4Hr1G053740.12
Wheat TraesCS4A02G121300 , TraesCS4A02G121300 , TraesCS4A02G121300 , TraesCS4A02G121300 , TraesCS4B02G181400 , TraesCS4B02G181400 , TraesCS4B02G181400 , TraesCS4B02G181400 , TraesCS4D02G184600 , TraesCS4D02G184600 , TraesCS4D02G184600 , TraesCS4D02G184600
Populus PNT04381 , PNT04380 , PNT04378 , PNT50623 , PNT36654 , PNT36655


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cDNA sequences
Sobic.001G395500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G144400 - -
2 Sobic.002G380500 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12891: splicing factor, arginine/serine-rich 2
3 Sobic.003G200200 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
4 Sobic.003G148000 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
5 Sobic.006G082600 OsFBX133 - F-box domain containing protein, expressed K10295: F-box protein 9
6 Sobic.002G145101 - -
7 Sobic.008G173900 "OsPPKL3(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659913)@serine/threonine-protein phosphatase BSL2, putative, expressed -
8 Sobic.001G251700 OsPP2Ac-4 - Phosphatase 2A isoform 4 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
9 Sobic.006G048500 - -
10 Sobic.002G243900 - -
11 Sobic.001G257300 OsFBL52 - F-box domain and LRR containing protein, expressed -
12 Sobic.003G220200 protein kinase family protein, putative, expressed K17541: SCY1-like protein 2
13 Sobic.007G096600 - -
14 Sobic.005G207500 AAA-type ATPase family protein, putative, expressed -
15 Sobic.001G205200 expressed protein -
16 Sobic.003G170100 - -
17 Sobic.001G046200 - -
18 Sobic.002G006900 tetratricopeptide repeat domain containing protein, expressed -
19 Sobic.003G429650 - -
20 Sobic.002G408200 sec8 exocyst complex component specific domain containing protein, expressed K06111: EXOC4, exocyst complex component 4


Gene co-expression network
sample Sobic001G395500 Sobic001G395500 Sobic005G144400 Sobic005G144400 Sobic001G395500--Sobic005G144400 Sobic002G380500 Sobic002G380500 Sobic001G395500--Sobic002G380500 Sobic003G200200 Sobic003G200200 Sobic001G395500--Sobic003G200200 Sobic003G148000 Sobic003G148000 Sobic001G395500--Sobic003G148000 Sobic006G082600 Sobic006G082600 Sobic001G395500--Sobic006G082600 Sobic002G145101 Sobic002G145101 Sobic001G395500--Sobic002G145101 Sobic008G173900 Sobic008G173900 Sobic001G395500--Sobic008G173900 Sobic001G251700 Sobic001G251700 Sobic001G395500--Sobic001G251700 Sobic006G048500 Sobic006G048500 Sobic001G395500--Sobic006G048500 Sobic005G144400--Sobic006G048500 Sobic005G144400--Sobic003G148000 Sobic002G243900 Sobic002G243900 Sobic005G144400--Sobic002G243900 Sobic007G096600 Sobic007G096600 Sobic005G144400--Sobic007G096600 Sobic004G007100 Sobic004G007100 Sobic005G144400--Sobic004G007100 Sobic001G214300 Sobic001G214300 Sobic005G144400--Sobic001G214300 Sobic003G176500 Sobic003G176500 Sobic005G144400--Sobic003G176500 Sobic003G429650 Sobic003G429650 Sobic005G144400--Sobic003G429650 Sobic007G178700 Sobic007G178700 Sobic005G144400--Sobic007G178700 Sobic002G380500--Sobic008G173900 Sobic003G170100 Sobic003G170100 Sobic002G380500--Sobic003G170100 Sobic001G420200 Sobic001G420200 Sobic002G380500--Sobic001G420200 Sobic002G144933 Sobic002G144933 Sobic002G380500--Sobic002G144933 Sobic002G157000 Sobic002G157000 Sobic002G380500--Sobic002G157000 Sobic002G380500--Sobic003G200200 Sobic003G108700 Sobic003G108700 Sobic002G380500--Sobic003G108700 Sobic003G268300 Sobic003G268300 Sobic002G380500--Sobic003G268300 Sobic005G110472 Sobic005G110472 Sobic002G380500--Sobic005G110472 Sobic003G200200--Sobic002G157000 Sobic002G006900 Sobic002G006900 Sobic003G200200--Sobic002G006900 Sobic003G200200--Sobic003G268300 Sobic003G200200--Sobic001G251700 Sobic003G200200--Sobic007G096600 Sobic002G248400 Sobic002G248400 Sobic003G200200--Sobic002G248400 Sobic001G155000 Sobic001G155000 Sobic003G200200--Sobic001G155000 Sobic003G200200--Sobic008G173900 Sobic003G200200--Sobic003G170100 Sobic003G148000--Sobic005G144400 Sobic002G180666 Sobic002G180666 Sobic003G148000--Sobic002G180666 Sobic003G148000--Sobic002G145101 Sobic003G148000--Sobic006G048500 Sobic003G148000--Sobic002G243900 Sobic003G148000--Sobic001G214300 Sobic003G148000--Sobic007G096600 Sobic003G148000--Sobic003G429650 Sobic004G258700 Sobic004G258700 Sobic003G148000--Sobic004G258700 Sobic001G162300 Sobic001G162300 Sobic006G082600--Sobic001G162300 Sobic006G082600--Sobic007G178700 Sobic007G037100 Sobic007G037100 Sobic006G082600--Sobic007G037100 Sobic006G082600--Sobic001G251700 Sobic004G196700 Sobic004G196700 Sobic006G082600--Sobic004G196700 Sobic009G134500 Sobic009G134500 Sobic006G082600--Sobic009G134500 Sobic010G124001 Sobic010G124001 Sobic006G082600--Sobic010G124001 Sobic009G127900 Sobic009G127900 Sobic006G082600--Sobic009G127900 Sobic006G082600--Sobic002G157000 Sobic002G145101--Sobic003G148000 Sobic002G145101--Sobic006G048500 Sobic002G145101--Sobic002G180666 Sobic002G145101--Sobic002G243900 Sobic008G028700 Sobic008G028700 Sobic002G145101--Sobic008G028700 Sobic002G145101--Sobic004G007100 Sobic006G079400 Sobic006G079400 Sobic002G145101--Sobic006G079400 Sobic006G032500 Sobic006G032500 Sobic002G145101--Sobic006G032500 Sobic002G145101--Sobic005G144400 Sobic008G173900--Sobic002G157000 Sobic008G173900--Sobic002G144933 Sobic008G173900--Sobic001G420200 Sobic008G173900--Sobic003G268300 Sobic008G054500 Sobic008G054500 Sobic008G173900--Sobic008G054500 Sobic008G173900--Sobic003G200200 Sobic001G274200 Sobic001G274200 Sobic008G173900--Sobic001G274200 Sobic001G413500 Sobic001G413500 Sobic008G173900--Sobic001G413500 Sobic008G173900--Sobic007G096600 Sobic007G137900 Sobic007G137900 Sobic001G251700--Sobic007G137900 Sobic001G251700--Sobic003G200200 Sobic002G157300 Sobic002G157300 Sobic001G251700--Sobic002G157300 Sobic001G251700--Sobic002G157000 Sobic001G251700--Sobic006G082600 Sobic001G251700--Sobic002G248400 Sobic002G320500 Sobic002G320500 Sobic001G251700--Sobic002G320500 Sobic001G251700--Sobic003G268300 Sobic003G220200 Sobic003G220200 Sobic001G251700--Sobic003G220200 Sobic006G048500--Sobic004G007100 Sobic006G048500--Sobic005G144400 Sobic006G048500--Sobic002G145101 Sobic006G048500--Sobic003G148000 Sobic006G048500--Sobic003G429650 Sobic006G048500--Sobic002G243900 Sobic006G048600 Sobic006G048600 Sobic006G048500--Sobic006G048600 Sobic006G048500--Sobic002G006900 Sobic006G182900 Sobic006G182900 Sobic006G048500--Sobic006G182900
Octagon: transcription factors


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