Gene annotation
Transcriptome id Sobic.004G337400.1
Synonym Sb04g036510, ATATH8
Functional annotation ELMO/CED-12 family protein, putative, expressed
UniProt A0A194YTZ4
Pfam PF01636 PF03109
Panther DB PTHR10566 PTHR10566:SF44
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G39190 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os02g56200.1 : ELMO/CED-12 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a022526
Brachypodium KQK01246
Barley HORVU6Hr1G088200.8 , HORVU6Hr1G088200.9 , HORVU6Hr1G088200.6 , HORVU6Hr1G088200.7 , HORVU6Hr1G088200.4 , HORVU6Hr1G088200.5 , HORVU6Hr1G088200.2 , HORVU6Hr1G088200.1
Wheat TraesCS6B02G411900 , TraesCS6A02G374100 , TraesCS6D02G358500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G136200 expressed protein -
2 Sobic.001G378100 relA-SpoT like protein RSH1, putative, expressed -
3 Sobic.006G232600 amine oxidase, flavin-containing, domain containing protein, expressed K02293: PDS, 15-cis-phytoene desaturase
4 Sobic.004G019800 MATE domain containing protein, expressed -
5 Sobic.003G077700 DUF647 domain containing protein, putative, expressed -
6 Sobic.010G002700 expressed protein -
7 Sobic.005G106600 CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
8 Sobic.005G084500 uncharacterized protein yqxC, putative, expressed K06442: 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase
9 Sobic.010G043800 uncharacterized protein ycf45, putative, expressed -
10 Sobic.003G003450 - K01177: beta-amylase
11 Sobic.001G258200 Ser/Thr protein phosphatase family protein, putative, expressed -
12 Sobic.003G271400 chloride transporter, chloride channel family, putative, expressed -
13 Sobic.007G005400 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
14 Sobic.001G516901 - -
15 Sobic.003G276300 zinc knuckle domain containing protein, expressed -
16 Sobic.007G103400 expressed protein -
17 Sobic.001G217900 PPR repeat domain containing protein, putative, expressed -
18 Sobic.001G504400 expressed protein -
19 Sobic.006G158100 tRNA-dihydrouridine synthase, putative, expressed K05543: tRNA-dihydrouridine synthase 2
20 Sobic.003G264800 expressed protein -


Gene co-expression network
sample Sobic004G337400 Sobic004G337400 Sobic007G136200 Sobic007G136200 Sobic004G337400--Sobic007G136200 Sobic001G378100 Sobic001G378100 Sobic004G337400--Sobic001G378100 Sobic006G232600 Sobic006G232600 Sobic004G337400--Sobic006G232600 Sobic004G019800 Sobic004G019800 Sobic004G337400--Sobic004G019800 Sobic003G077700 Sobic003G077700 Sobic004G337400--Sobic003G077700 Sobic010G002700 Sobic010G002700 Sobic004G337400--Sobic010G002700 Sobic005G106600 Sobic005G106600 Sobic004G337400--Sobic005G106600 Sobic005G084500 Sobic005G084500 Sobic004G337400--Sobic005G084500 Sobic010G043800 Sobic010G043800 Sobic004G337400--Sobic010G043800 Sobic006G158100 Sobic006G158100 Sobic007G136200--Sobic006G158100 Sobic007G136200--Sobic010G043800 Sobic001G504400 Sobic001G504400 Sobic007G136200--Sobic001G504400 Sobic007G136200--Sobic010G002700 Sobic007G103400 Sobic007G103400 Sobic007G136200--Sobic007G103400 Sobic001G169900 Sobic001G169900 Sobic007G136200--Sobic001G169900 Sobic007G136200--Sobic004G337400 Sobic007G108900 Sobic007G108900 Sobic007G136200--Sobic007G108900 Sobic007G136200--Sobic001G378100 Sobic003G073800 Sobic003G073800 Sobic001G378100--Sobic003G073800 Sobic001G217900 Sobic001G217900 Sobic001G378100--Sobic001G217900 Sobic001G378100--Sobic001G504400 Sobic001G077300 Sobic001G077300 Sobic001G378100--Sobic001G077300 Sobic001G540600 Sobic001G540600 Sobic001G378100--Sobic001G540600 Sobic001G536700 Sobic001G536700 Sobic001G378100--Sobic001G536700 Sobic001G378100--Sobic006G232600 Sobic009G170200 Sobic009G170200 Sobic001G378100--Sobic009G170200 Sobic001G258200 Sobic001G258200 Sobic001G378100--Sobic001G258200 Sobic006G232600--Sobic009G170200 Sobic007G087100 Sobic007G087100 Sobic006G232600--Sobic007G087100 Sobic003G003450 Sobic003G003450 Sobic006G232600--Sobic003G003450 Sobic006G232600--Sobic001G378100 Sobic009G073900 Sobic009G073900 Sobic006G232600--Sobic009G073900 Sobic006G233700 Sobic006G233700 Sobic006G232600--Sobic006G233700 Sobic009G103000 Sobic009G103000 Sobic006G232600--Sobic009G103000 Sobic006G232600--Sobic001G077300 Sobic002G081400 Sobic002G081400 Sobic006G232600--Sobic002G081400 Sobic009G093100 Sobic009G093100 Sobic004G019800--Sobic009G093100 Sobic004G019800--Sobic001G378100 Sobic004G019800--Sobic001G536700 Sobic004G019800--Sobic009G170200 Sobic004G019800--Sobic001G504400 Sobic009G237000 Sobic009G237000 Sobic004G019800--Sobic009G237000 Sobic001G359300 Sobic001G359300 Sobic004G019800--Sobic001G359300 Sobic002G258600 Sobic002G258600 Sobic004G019800--Sobic002G258600 Sobic003G233700 Sobic003G233700 Sobic004G019800--Sobic003G233700 Sobic003G077700--Sobic004G337400 Sobic001G516901 Sobic001G516901 Sobic003G077700--Sobic001G516901 Sobic005G231100 Sobic005G231100 Sobic003G077700--Sobic005G231100 Sobic003G077700--Sobic005G084500 Sobic003G077700--Sobic001G378100 Sobic003G077700--Sobic003G233700 Sobic001G500600 Sobic001G500600 Sobic003G077700--Sobic001G500600 Sobic002G347600 Sobic002G347600 Sobic003G077700--Sobic002G347600 Sobic003G301300 Sobic003G301300 Sobic003G077700--Sobic003G301300 Sobic003G017100 Sobic003G017100 Sobic010G002700--Sobic003G017100 Sobic010G002700--Sobic001G169900 Sobic005G118400 Sobic005G118400 Sobic010G002700--Sobic005G118400 Sobic010G002700--Sobic010G043800 Sobic010G002700--Sobic001G378100 Sobic010G002700--Sobic007G136200 Sobic003G276300 Sobic003G276300 Sobic010G002700--Sobic003G276300 Sobic001G198100 Sobic001G198100 Sobic010G002700--Sobic001G198100 Sobic001G530900 Sobic001G530900 Sobic010G002700--Sobic001G530900 Sobic003G220100 Sobic003G220100 Sobic005G106600--Sobic003G220100 Sobic001G333800 Sobic001G333800 Sobic005G106600--Sobic001G333800 Sobic009G038900 Sobic009G038900 Sobic005G106600--Sobic009G038900 Sobic001G133000 Sobic001G133000 Sobic005G106600--Sobic001G133000 Sobic004G312600 Sobic004G312600 Sobic005G106600--Sobic004G312600 Sobic007G058100 Sobic007G058100 Sobic005G106600--Sobic007G058100 Sobic005G106600--Sobic007G136200 Sobic006G219600 Sobic006G219600 Sobic005G106600--Sobic006G219600 Sobic005G106600--Sobic001G378100 Sobic007G005400 Sobic007G005400 Sobic005G084500--Sobic007G005400 Sobic002G118200 Sobic002G118200 Sobic005G084500--Sobic002G118200 Sobic004G238200 Sobic004G238200 Sobic005G084500--Sobic004G238200 Sobic005G084500--Sobic004G337400 Sobic005G084500--Sobic006G219600 Sobic005G084500--Sobic004G019800 Sobic004G163800 Sobic004G163800 Sobic005G084500--Sobic004G163800 Sobic005G084500--Sobic001G530900 Sobic005G084500--Sobic001G516901 Sobic009G121000 Sobic009G121000 Sobic010G043800--Sobic009G121000 Sobic010G043800--Sobic007G136200 Sobic010G043800--Sobic001G504400 Sobic006G142600 Sobic006G142600 Sobic010G043800--Sobic006G142600 Sobic010G043800--Sobic010G002700 Sobic010G043800--Sobic006G158100 Sobic010G043800--Sobic007G103400 Sobic010G043800--Sobic001G169900 Sobic010G043800--Sobic001G378100
Octagon: transcription factors


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