Gene annotation
Transcriptome id Sobic.001G298900.1,Sobic.001G298900.2
Synonym Sb01g029120, G2484-1, ATG2484-1
Functional annotation agenet domain containing protein, putative, expressed
UniProt A0A1B6QLX1 , A0A1B6QLW4
Pfam PF05641
Panther DB PTHR31917 PTHR31917:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G17330 : G2484-1 protein
RAP-DB (Rice) LOC_Os10g41030.1 : agenet domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a051972 , Zm00025a003320
Brachypodium KQJ97783 , KQJ97782
Barley HORVU1Hr1G056220.3 , HORVU1Hr1G056220.23 , HORVU1Hr1G056220.22 , HORVU1Hr1G056220.21 , HORVU1Hr1G056220.20 , HORVU1Hr1G056220.27 , HORVU1Hr1G056220.26 , HORVU1Hr1G056220.25 , HORVU1Hr1G056220.24 , HORVU1Hr1G056220.28 , HORVU1Hr1G056220.18 , HORVU1Hr1G056220.19 , HORVU1Hr1G056220.12 , HORVU1Hr1G056220.13 , HORVU1Hr1G056220.10 , HORVU1Hr1G056220.11 , HORVU1Hr1G056220.16 , HORVU1Hr1G056220.17 , HORVU1Hr1G056220.14 , HORVU1Hr1G056220.15 , HORVU1Hr1G056220.1 , HORVU1Hr1G056220.2 , HORVU1Hr1G056220.4 , HORVU1Hr1G056220.5 , HORVU1Hr1G056220.6 , HORVU1Hr1G056220.7 , HORVU1Hr1G056220.8 , HORVU1Hr1G056220.9
Wheat TraesCS1B02G234400 , TraesCS1B02G234400 , TraesCS1B02G234400 , TraesCS1B02G234400 , TraesCS1D02G222700 , TraesCS1D02G222700 , TraesCS1D02G222700 , TraesCS1A02G221100 , TraesCS1A02G221100 , TraesCS1A02G221100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G230000 expressed protein K10779: transcriptional regulator ATRX
2 Sobic.006G219600 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
3 Sobic.002G198200 expressed protein K03128: transcription initiation factor TFIID subunit 2
4 Sobic.004G178500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor 7, putative, expressed K14486: K14486, auxin response factor
5 Sobic.003G155100 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3
6 Sobic.008G044100 expressed protein -
7 Sobic.003G388100 expressed protein -
8 Sobic.005G142800 exportin 1, putative, expressed K15436: TRPO3, transportin-3
9 Sobic.004G146600 lipase, putative, expressed -
10 Sobic.003G101700 dnaJ domain containing protein, expressed -
11 Sobic.004G134200 GTP binding protein, putative, expressed -
12 Sobic.002G316600 expressed protein -
13 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1
14 Sobic.007G111400 - -
15 Sobic.006G050700 disease resistance RPP13-like protein 1, putative, expressed -
16 Sobic.009G256300 DNA binding protein, putative, expressed -
17 Sobic.010G079500 PHD-finger domain containing protein, putative, expressed -
18 Sobic.009G215500 transcription initiation factor IIB, putative, expressed K15196: BRF1, transcription factor IIIB 90 kDa subunit
19 Sobic.006G233700 PolI-like DNA polymerase, putative, expressed K02335: DNA polymerase I
20 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G298900 Sobic001G298900 Sobic001G230000 Sobic001G230000 Sobic001G298900--Sobic001G230000 Sobic006G219600 Sobic006G219600 Sobic001G298900--Sobic006G219600 Sobic002G198200 Sobic002G198200 Sobic001G298900--Sobic002G198200 Sobic004G178500 Sobic004G178500 Sobic001G298900--Sobic004G178500 Sobic003G155100 Sobic003G155100 Sobic001G298900--Sobic003G155100 Sobic008G044100 Sobic008G044100 Sobic001G298900--Sobic008G044100 Sobic003G388100 Sobic003G388100 Sobic001G298900--Sobic003G388100 Sobic005G142800 Sobic005G142800 Sobic001G298900--Sobic005G142800 Sobic004G146600 Sobic004G146600 Sobic001G298900--Sobic004G146600 Sobic010G206900 Sobic010G206900 Sobic001G230000--Sobic010G206900 Sobic001G230000--Sobic003G155100 Sobic008G001200 Sobic008G001200 Sobic001G230000--Sobic008G001200 Sobic004G276400 Sobic004G276400 Sobic001G230000--Sobic004G276400 Sobic004G223000 Sobic004G223000 Sobic001G230000--Sobic004G223000 Sobic009G256300 Sobic009G256300 Sobic001G230000--Sobic009G256300 Sobic010G010700 Sobic010G010700 Sobic001G230000--Sobic010G010700 Sobic001G230000--Sobic001G298900 Sobic001G230000--Sobic008G044100 Sobic006G219600--Sobic003G155100 Sobic009G201300 Sobic009G201300 Sobic006G219600--Sobic009G201300 Sobic002G124600 Sobic002G124600 Sobic006G219600--Sobic002G124600 Sobic006G050700 Sobic006G050700 Sobic006G219600--Sobic006G050700 Sobic006G219600--Sobic001G298900 Sobic006G133900 Sobic006G133900 Sobic006G219600--Sobic006G133900 Sobic001G133000 Sobic001G133000 Sobic006G219600--Sobic001G133000 Sobic005G106600 Sobic005G106600 Sobic006G219600--Sobic005G106600 Sobic005G084500 Sobic005G084500 Sobic006G219600--Sobic005G084500 Sobic002G198200--Sobic001G298900 Sobic007G111400 Sobic007G111400 Sobic002G198200--Sobic007G111400 Sobic002G198200--Sobic003G155100 Sobic002G198200--Sobic006G219600 Sobic002G198200--Sobic004G178500 Sobic002G198200--Sobic003G388100 Sobic006G065100 Sobic006G065100 Sobic002G198200--Sobic006G065100 Sobic002G345700 Sobic002G345700 Sobic002G198200--Sobic002G345700 Sobic002G198200--Sobic005G142800 Sobic004G178500--Sobic001G298900 Sobic004G178500--Sobic002G198200 Sobic004G181600 Sobic004G181600 Sobic004G178500--Sobic004G181600 Sobic004G178500--Sobic008G044100 Sobic004G178500--Sobic006G133900 Sobic006G065600 Sobic006G065600 Sobic004G178500--Sobic006G065600 Sobic006G270700 Sobic006G270700 Sobic004G178500--Sobic006G270700 Sobic001G365900 Sobic001G365900 Sobic004G178500--Sobic001G365900 Sobic004G178500--Sobic003G388100 Sobic003G155100--Sobic008G001200 Sobic003G155100--Sobic006G219600 Sobic003G155100--Sobic010G206900 Sobic003G155100--Sobic001G230000 Sobic001G375100 Sobic001G375100 Sobic003G155100--Sobic001G375100 Sobic001G194200 Sobic001G194200 Sobic003G155100--Sobic001G194200 Sobic003G155100--Sobic010G010700 Sobic009G256400 Sobic009G256400 Sobic003G155100--Sobic009G256400 Sobic004G291900 Sobic004G291900 Sobic003G155100--Sobic004G291900 Sobic008G044100--Sobic010G010700 Sobic004G134200 Sobic004G134200 Sobic008G044100--Sobic004G134200 Sobic001G374100 Sobic001G374100 Sobic008G044100--Sobic001G374100 Sobic008G044100--Sobic003G155100 Sobic008G044100--Sobic010G206900 Sobic008G044100--Sobic001G230000 Sobic008G044100--Sobic008G001200 Sobic003G389200 Sobic003G389200 Sobic008G044100--Sobic003G389200 Sobic002G316600 Sobic002G316600 Sobic008G044100--Sobic002G316600 Sobic003G388100--Sobic008G001200 Sobic001G454500 Sobic001G454500 Sobic003G388100--Sobic001G454500 Sobic003G388100--Sobic010G206900 Sobic003G388100--Sobic001G365900 Sobic010G123600 Sobic010G123600 Sobic003G388100--Sobic010G123600 Sobic003G388100--Sobic003G155100 Sobic003G388100--Sobic009G256300 Sobic003G388100--Sobic003G389200 Sobic003G388100--Sobic001G230000 Sobic006G119400 Sobic006G119400 Sobic005G142800--Sobic006G119400 Sobic005G142800--Sobic001G298900 Sobic001G124100 Sobic001G124100 Sobic005G142800--Sobic001G124100 Sobic005G142800--Sobic004G134200 Sobic008G172300 Sobic008G172300 Sobic005G142800--Sobic008G172300 Sobic005G142800--Sobic002G345700 Sobic002G418600 Sobic002G418600 Sobic005G142800--Sobic002G418600 Sobic010G079500 Sobic010G079500 Sobic005G142800--Sobic010G079500 Sobic005G142800--Sobic007G111400 Sobic004G146600--Sobic001G230000 Sobic004G146600--Sobic001G298900 Sobic004G001500 Sobic004G001500 Sobic004G146600--Sobic004G001500 Sobic004G146600--Sobic006G219600 Sobic002G043800 Sobic002G043800 Sobic004G146600--Sobic002G043800 Sobic004G143475 Sobic004G143475 Sobic004G146600--Sobic004G143475 Sobic010G132600 Sobic010G132600 Sobic004G146600--Sobic010G132600 Sobic004G146600--Sobic003G155100 Sobic003G043200 Sobic003G043200 Sobic004G146600--Sobic003G043200
Octagon: transcription factors


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