Gene annotation
Transcriptome id Sobic.002G020400.1
Synonym PDV2, Sb02g001890
Functional annotation PDV2, putative, expressed
UniProt C5X8N6
Pfam -
Panther DB PTHR33600 PTHR33600:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G16070 : plastid division2
RAP-DB (Rice) LOC_Os07g03130.1 : PDV2, putative, expressed
MaizeGDB (Corn) Zm00025a044941
Brachypodium -
Barley HORVU2Hr1G061790.4 , HORVU2Hr1G061790.7 , HORVU2Hr1G061790.6 , HORVU2Hr1G061790.1 , HORVU2Hr1G061790.3 , HORVU2Hr1G061790.2 , HORVU2Hr1G061790.8
Wheat TraesCS2D02G257600 , TraesCS2B02G275900 , TraesCS2B02G275900 , TraesCS2A02G266200
Populus -


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cDNA sequences
Sobic.002G020400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G178100 uncharacterized oxidoreductase yoxD, putative, expressed -
2 Sobic.001G043800 stage II sporulation protein E, putative, expressed -
3 Sobic.002G000600 glycosyl transferase, group 1 domain containing protein, expressed K06119: sulfoquinovosyltransferase
4 Sobic.003G141100 O-sialoglycoprotein endopeptidase, putative, expressed K01409: KAE1, tsaD, N6-L-threonylcarbamoyladenine synthase
5 Sobic.007G023200 OsFBX178 - F-box domain containing protein, expressed -
6 Sobic.003G439100 mitochondrial carrier protein, putative, expressed -
7 Sobic.002G239300 OsFBX338 - F-box domain containing protein, expressed -
8 Sobic.002G301000 zinc finger, C3HC4 type, domain containing protein, expressed -
9 Sobic.003G398700 expressed protein K15210: snRNA-activating protein complex subunit 3
10 Sobic.010G149200 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
11 Sobic.006G173600 serine racemase, putative, expressed K12235: serine racemase
12 Sobic.006G145200 expressed protein -
13 Sobic.001G437100 expressed protein -
14 Sobic.004G294700 F-box family protein, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
15 Sobic.010G140600 bolA, putative, expressed -
16 Sobic.002G048200 pentatricopeptide, putative, expressed -
17 Sobic.004G182900 PHD finger protein, putative, expressed -
18 Sobic.002G321901 - -
19 Sobic.003G232700 peptide deformylase, putative, expressed K01462: PDF, peptide deformylase
20 Sobic.003G345500 ureidoglycolate hydrolase, putative, expressed -


Gene co-expression network
sample Sobic002G020400 Sobic002G020400 Sobic004G178100 Sobic004G178100 Sobic002G020400--Sobic004G178100 Sobic001G043800 Sobic001G043800 Sobic002G020400--Sobic001G043800 Sobic002G000600 Sobic002G000600 Sobic002G020400--Sobic002G000600 Sobic003G141100 Sobic003G141100 Sobic002G020400--Sobic003G141100 Sobic007G023200 Sobic007G023200 Sobic002G020400--Sobic007G023200 Sobic003G439100 Sobic003G439100 Sobic002G020400--Sobic003G439100 Sobic002G239300 Sobic002G239300 Sobic002G020400--Sobic002G239300 Sobic002G301000 Sobic002G301000 Sobic002G020400--Sobic002G301000 Sobic003G398700 Sobic003G398700 Sobic002G020400--Sobic003G398700 Sobic004G178100--Sobic002G000600 Sobic004G178100--Sobic002G020400 Sobic010G043800 Sobic010G043800 Sobic004G178100--Sobic010G043800 Sobic006G173600 Sobic006G173600 Sobic004G178100--Sobic006G173600 Sobic006G158100 Sobic006G158100 Sobic004G178100--Sobic006G158100 Sobic001G198100 Sobic001G198100 Sobic004G178100--Sobic001G198100 Sobic003G247400 Sobic003G247400 Sobic004G178100--Sobic003G247400 Sobic004G337400 Sobic004G337400 Sobic004G178100--Sobic004G337400 Sobic001G516901 Sobic001G516901 Sobic004G178100--Sobic001G516901 Sobic007G136800 Sobic007G136800 Sobic001G043800--Sobic007G136800 Sobic006G130800 Sobic006G130800 Sobic001G043800--Sobic006G130800 Sobic004G086700 Sobic004G086700 Sobic001G043800--Sobic004G086700 Sobic002G218500 Sobic002G218500 Sobic001G043800--Sobic002G218500 Sobic001G102500 Sobic001G102500 Sobic001G043800--Sobic001G102500 Sobic006G031800 Sobic006G031800 Sobic001G043800--Sobic006G031800 Sobic007G029700 Sobic007G029700 Sobic001G043800--Sobic007G029700 Sobic001G053000 Sobic001G053000 Sobic001G043800--Sobic001G053000 Sobic002G431300 Sobic002G431300 Sobic001G043800--Sobic002G431300 Sobic003G232700 Sobic003G232700 Sobic002G000600--Sobic003G232700 Sobic002G000600--Sobic004G178100 Sobic002G000600--Sobic003G141100 Sobic008G062400 Sobic008G062400 Sobic002G000600--Sobic008G062400 Sobic006G197300 Sobic006G197300 Sobic002G000600--Sobic006G197300 Sobic002G000600--Sobic007G023200 Sobic002G000600--Sobic001G516901 Sobic004G328400 Sobic004G328400 Sobic002G000600--Sobic004G328400 Sobic001G500600 Sobic001G500600 Sobic002G000600--Sobic001G500600 Sobic003G141100--Sobic001G500600 Sobic003G141100--Sobic004G328400 Sobic004G336200 Sobic004G336200 Sobic003G141100--Sobic004G336200 Sobic003G141100--Sobic003G232700 Sobic003G372900 Sobic003G372900 Sobic003G141100--Sobic003G372900 Sobic001G054100 Sobic001G054100 Sobic003G141100--Sobic001G054100 Sobic009G148500 Sobic009G148500 Sobic003G141100--Sobic009G148500 Sobic003G160800 Sobic003G160800 Sobic003G141100--Sobic003G160800 Sobic005G002900 Sobic005G002900 Sobic003G141100--Sobic005G002900 Sobic004G238200 Sobic004G238200 Sobic007G023200--Sobic004G238200 Sobic003G217700 Sobic003G217700 Sobic007G023200--Sobic003G217700 Sobic004G163800 Sobic004G163800 Sobic007G023200--Sobic004G163800 Sobic003G234900 Sobic003G234900 Sobic007G023200--Sobic003G234900 Sobic002G168300 Sobic002G168300 Sobic007G023200--Sobic002G168300 Sobic005G059800 Sobic005G059800 Sobic007G023200--Sobic005G059800 Sobic007G185700 Sobic007G185700 Sobic007G023200--Sobic007G185700 Sobic007G023200--Sobic008G062400 Sobic010G176550 Sobic010G176550 Sobic007G023200--Sobic010G176550 Sobic002G048200 Sobic002G048200 Sobic003G439100--Sobic002G048200 Sobic003G439100--Sobic002G020400 Sobic001G006400 Sobic001G006400 Sobic003G439100--Sobic001G006400 Sobic008G063200 Sobic008G063200 Sobic003G439100--Sobic008G063200 Sobic001G006000 Sobic001G006000 Sobic003G439100--Sobic001G006000 Sobic002G065200 Sobic002G065200 Sobic003G439100--Sobic002G065200 Sobic010G091200 Sobic010G091200 Sobic003G439100--Sobic010G091200 Sobic002G056800 Sobic002G056800 Sobic003G439100--Sobic002G056800 Sobic002G424100 Sobic002G424100 Sobic003G439100--Sobic002G424100 Sobic002G239300--Sobic004G178100 Sobic002G239300--Sobic001G198100 Sobic001G169900 Sobic001G169900 Sobic002G239300--Sobic001G169900 Sobic001G126100 Sobic001G126100 Sobic002G239300--Sobic001G126100 Sobic007G150100 Sobic007G150100 Sobic002G239300--Sobic007G150100 Sobic002G239300--Sobic010G043800 Sobic004G179400 Sobic004G179400 Sobic002G239300--Sobic004G179400 Sobic004G178500 Sobic004G178500 Sobic002G239300--Sobic004G178500 Sobic004G183000 Sobic004G183000 Sobic002G239300--Sobic004G183000 Sobic002G301000--Sobic008G062400 Sobic001G048100 Sobic001G048100 Sobic002G301000--Sobic001G048100 Sobic010G265300 Sobic010G265300 Sobic002G301000--Sobic010G265300 Sobic002G301000--Sobic002G020400 Sobic002G301000--Sobic003G234900 Sobic001G412100 Sobic001G412100 Sobic002G301000--Sobic001G412100 Sobic010G149200 Sobic010G149200 Sobic002G301000--Sobic010G149200 Sobic004G208600 Sobic004G208600 Sobic002G301000--Sobic004G208600 Sobic001G332500 Sobic001G332500 Sobic002G301000--Sobic001G332500 Sobic002G257750 Sobic002G257750 Sobic003G398700--Sobic002G257750 Sobic001G456900 Sobic001G456900 Sobic003G398700--Sobic001G456900 Sobic008G044100 Sobic008G044100 Sobic003G398700--Sobic008G044100 Sobic010G021500 Sobic010G021500 Sobic003G398700--Sobic010G021500 Sobic003G398700--Sobic007G136800 Sobic004G185800 Sobic004G185800 Sobic003G398700--Sobic004G185800 Sobic003G168100 Sobic003G168100 Sobic003G398700--Sobic003G168100 Sobic008G113100 Sobic008G113100 Sobic003G398700--Sobic008G113100 Sobic010G126000 Sobic010G126000 Sobic003G398700--Sobic010G126000
Octagon: transcription factors


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