Gene annotation
Transcriptome id Sobic.002G301000.1,Sobic.002G301000.3,Sobic.002G301000.2
Synonym NIP2, Sb02g033150
Functional annotation zinc finger, C3HC4 type, domain containing protein, expressed
UniProt A0A1B6QE62 , A0A1W0W6B7 , A0A1B6QE67
Pfam PF13639
Panther DB PTHR14155
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT2G17730 : NEP-interacting protein 2
RAP-DB (Rice) LOC_Os07g29600.1,LOC_Os07g29600.2 : zinc finger, C3HC4 type, domain containing protein, expressed
MaizeGDB (Corn) Zm00025a014627 , Zm00025a048015
Brachypodium KQK16290 , KQK16291
Barley HORVU3Hr1G091480.6 , HORVU3Hr1G091480.5 , HORVU3Hr1G091480.4 , HORVU3Hr1G091480.3 , HORVU3Hr1G091480.1 , HORVU5Hr1G039940.2 , HORVU5Hr1G039940.3 , HORVU5Hr1G039940.1
Wheat TraesCS3D02G405200 , TraesCS3A02G410600
Populus -


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cDNA sequences
Sobic.002G301000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G062400 similar to Diphosphonucleotide phosphatase 1(PubMedID : 29862293)@inositol-1-monophosphatase, putative, expressed K15422: 3'(2'), 5'-bisphosphate nucleotidase / inositol polyphosphate 1-phosphatase
2 Sobic.001G048100 OsAPRL5 adenosine 5\'-phosphosulfate reductase-like OsAPRL5, expressed -
3 Sobic.010G265300 AAA-type ATPase family protein, putative, expressed -
4 Sobic.002G020400 PDV2, putative, expressed -
5 Sobic.003G234900 radical SAM enzyme, putative, expressed K06941: 23S rRNA (adenine2503-C2)-methyltransferase
6 Sobic.001G412100 CDP-alcohol phosphatidyltransferase, putative, expressed K00995: pgsA, CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase
7 Sobic.010G149200 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
8 Sobic.004G208600 glycine-rich protein, putative, expressed -
9 Sobic.001G332500 WRKY81, expressed -
10 Sobic.005G231100 alpha-hemolysin, putative, expressed K08998: uncharacterized protein
11 Sobic.010G184100 mitochondrial carrier protein, putative, expressed -
12 Sobic.007G165900 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05610: UCHL5, ubiquitin carboxyl-terminal hydrolase L5
13 Sobic.002G218500 lecithine cholesterol acyltransferase, putative, expressed K00679: phospholipid:diacylglycerol acyltransferase
14 Sobic.007G136800 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2
15 Sobic.007G023200 OsFBX178 - F-box domain containing protein, expressed -
16 Sobic.002G252800 OsFBX332 - F-box domain containing protein, expressed -
17 Sobic.004G164400 expressed protein -
18 Sobic.004G131800 sirohydrochlorin ferrochelatase, putative, expressed -
19 Sobic.002G170200 zinc finger family protein, putative, expressed -
20 Sobic.002G054300 ABC transporter, ATP-binding protein, putative, expressed K06184: ATP-binding cassette, subfamily F, member 1


Gene co-expression network
sample Sobic002G301000 Sobic002G301000 Sobic008G062400 Sobic008G062400 Sobic002G301000--Sobic008G062400 Sobic001G048100 Sobic001G048100 Sobic002G301000--Sobic001G048100 Sobic010G265300 Sobic010G265300 Sobic002G301000--Sobic010G265300 Sobic002G020400 Sobic002G020400 Sobic002G301000--Sobic002G020400 Sobic003G234900 Sobic003G234900 Sobic002G301000--Sobic003G234900 Sobic001G412100 Sobic001G412100 Sobic002G301000--Sobic001G412100 Sobic010G149200 Sobic010G149200 Sobic002G301000--Sobic010G149200 Sobic004G208600 Sobic004G208600 Sobic002G301000--Sobic004G208600 Sobic001G332500 Sobic001G332500 Sobic002G301000--Sobic001G332500 Sobic003G141100 Sobic003G141100 Sobic008G062400--Sobic003G141100 Sobic003G232700 Sobic003G232700 Sobic008G062400--Sobic003G232700 Sobic007G023200 Sobic007G023200 Sobic008G062400--Sobic007G023200 Sobic004G120100 Sobic004G120100 Sobic008G062400--Sobic004G120100 Sobic002G000600 Sobic002G000600 Sobic008G062400--Sobic002G000600 Sobic003G247400 Sobic003G247400 Sobic008G062400--Sobic003G247400 Sobic008G062400--Sobic003G234900 Sobic002G347600 Sobic002G347600 Sobic008G062400--Sobic002G347600 Sobic004G163800 Sobic004G163800 Sobic008G062400--Sobic004G163800 Sobic001G080700 Sobic001G080700 Sobic001G048100--Sobic001G080700 Sobic010G184100 Sobic010G184100 Sobic001G048100--Sobic010G184100 Sobic009G165800 Sobic009G165800 Sobic001G048100--Sobic009G165800 Sobic004G121100 Sobic004G121100 Sobic001G048100--Sobic004G121100 Sobic007G171400 Sobic007G171400 Sobic001G048100--Sobic007G171400 Sobic010G251000 Sobic010G251000 Sobic001G048100--Sobic010G251000 Sobic004G040900 Sobic004G040900 Sobic001G048100--Sobic004G040900 Sobic003G264200 Sobic003G264200 Sobic001G048100--Sobic003G264200 Sobic004G269000 Sobic004G269000 Sobic001G048100--Sobic004G269000 Sobic001G120500 Sobic001G120500 Sobic010G265300--Sobic001G120500 Sobic005G160400 Sobic005G160400 Sobic010G265300--Sobic005G160400 Sobic010G092300 Sobic010G092300 Sobic010G265300--Sobic010G092300 Sobic005G172500 Sobic005G172500 Sobic010G265300--Sobic005G172500 Sobic008G076800 Sobic008G076800 Sobic010G265300--Sobic008G076800 Sobic004G092500 Sobic004G092500 Sobic010G265300--Sobic004G092500 Sobic007G084100 Sobic007G084100 Sobic010G265300--Sobic007G084100 Sobic004G257100 Sobic004G257100 Sobic010G265300--Sobic004G257100 Sobic001G226700 Sobic001G226700 Sobic010G265300--Sobic001G226700 Sobic004G178100 Sobic004G178100 Sobic002G020400--Sobic004G178100 Sobic001G043800 Sobic001G043800 Sobic002G020400--Sobic001G043800 Sobic002G020400--Sobic002G000600 Sobic002G020400--Sobic003G141100 Sobic002G020400--Sobic007G023200 Sobic003G439100 Sobic003G439100 Sobic002G020400--Sobic003G439100 Sobic002G239300 Sobic002G239300 Sobic002G020400--Sobic002G239300 Sobic002G020400--Sobic002G301000 Sobic003G398700 Sobic003G398700 Sobic002G020400--Sobic003G398700 Sobic003G234900--Sobic004G163800 Sobic007G185700 Sobic007G185700 Sobic003G234900--Sobic007G185700 Sobic003G067100 Sobic003G067100 Sobic003G234900--Sobic003G067100 Sobic005G231100 Sobic005G231100 Sobic003G234900--Sobic005G231100 Sobic002G431300 Sobic002G431300 Sobic003G234900--Sobic002G431300 Sobic002G043600 Sobic002G043600 Sobic003G234900--Sobic002G043600 Sobic003G234900--Sobic003G141100 Sobic002G343400 Sobic002G343400 Sobic003G234900--Sobic002G343400 Sobic006G038500 Sobic006G038500 Sobic003G234900--Sobic006G038500 Sobic001G412100--Sobic005G160400 Sobic007G165900 Sobic007G165900 Sobic001G412100--Sobic007G165900 Sobic001G412100--Sobic010G265300 Sobic001G412100--Sobic004G257100 Sobic010G156000 Sobic010G156000 Sobic001G412100--Sobic010G156000 Sobic008G087900 Sobic008G087900 Sobic001G412100--Sobic008G087900 Sobic001G412100--Sobic002G301000 Sobic001G031100 Sobic001G031100 Sobic001G412100--Sobic001G031100 Sobic007G095500 Sobic007G095500 Sobic001G412100--Sobic007G095500 Sobic006G145200 Sobic006G145200 Sobic010G149200--Sobic006G145200 Sobic010G243900 Sobic010G243900 Sobic010G149200--Sobic010G243900 Sobic010G021500 Sobic010G021500 Sobic010G149200--Sobic010G021500 Sobic001G126100 Sobic001G126100 Sobic010G149200--Sobic001G126100 Sobic004G164400 Sobic004G164400 Sobic010G149200--Sobic004G164400 Sobic003G340600 Sobic003G340600 Sobic010G149200--Sobic003G340600 Sobic004G042200 Sobic004G042200 Sobic010G149200--Sobic004G042200 Sobic010G143800 Sobic010G143800 Sobic010G149200--Sobic010G143800 Sobic003G221900 Sobic003G221900 Sobic010G149200--Sobic003G221900 Sobic004G225600 Sobic004G225600 Sobic004G208600--Sobic004G225600 Sobic001G384800 Sobic001G384800 Sobic004G208600--Sobic001G384800 Sobic004G208600--Sobic007G095500 Sobic001G202000 Sobic001G202000 Sobic004G208600--Sobic001G202000 Sobic001G514100 Sobic001G514100 Sobic004G208600--Sobic001G514100 Sobic008G090900 Sobic008G090900 Sobic004G208600--Sobic008G090900 Sobic001G099000 Sobic001G099000 Sobic004G208600--Sobic001G099000 Sobic007G116100 Sobic007G116100 Sobic004G208600--Sobic007G116100 Sobic004G255500 Sobic004G255500 Sobic004G208600--Sobic004G255500 Sobic001G332500--Sobic001G080700 Sobic001G122832 Sobic001G122832 Sobic001G332500--Sobic001G122832 Sobic003G253600 Sobic003G253600 Sobic001G332500--Sobic003G253600 Sobic001G375700 Sobic001G375700 Sobic001G332500--Sobic001G375700 Sobic001G392300 Sobic001G392300 Sobic001G332500--Sobic001G392300 Sobic001G332500--Sobic003G221900 Sobic007G136800 Sobic007G136800 Sobic001G332500--Sobic007G136800 Sobic001G332500--Sobic003G398700 Sobic006G185100 Sobic006G185100 Sobic001G332500--Sobic006G185100
Octagon: transcription factors


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