Gene annotation
Transcriptome id Sobic.009G014100.2,Sobic.009G014100.1
Synonym Sb09g001380
Functional annotation OsFBX178 - F-box domain containing protein, expressed
UniProt A0A1B6P640
Pfam PF00646
Panther DB PTHR32212 PTHR32212:SF85
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G49150 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os05g49680.1 : OsFBX178 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK18392 , KQK18393 , KQK19986
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G014100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G197000 M16 domain containing zinc peptidase, putative, expressed -
2 Sobic.008G172300 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
3 Sobic.002G073200 peptidase, M24 family protein, putative, expressed K01262: Xaa-Pro aminopeptidase
4 Sobic.003G108900 -(PubMedID : 26465154)@peptidase, putative, expressed -
5 Sobic.004G026500 expressed protein -
6 Sobic.002G354600 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
7 Sobic.004G333400 COBW domain containing protein, putative, expressed -
8 Sobic.003G190000 PPR repeat domain containing protein, putative, expressed -
9 Sobic.002G168300 RGH2B, putative, expressed -
10 Sobic.001G072700 expressed protein -
11 Sobic.009G052700 4Fe-4S binding domain containing protein, expressed -
12 Sobic.002G418600 expressed protein K15710: E3 ubiquitin-protein ligase SHPRH
13 Sobic.010G109600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@angel, putative, expressed -
14 Sobic.001G500600 pseudouridine synthase family protein, putative, expressed -
15 Sobic.004G300000 OsFtsH7 FtsH protease, homologue of AtFtsH7, expressed K03798: ftsH, cell division protease FtsH
16 Sobic.003G203300 stress regulated protein, putative, expressed -
17 Sobic.006G214700 APO, putative, expressed -
18 Sobic.001G060500 YT521-B, putative, expressed -
19 Sobic.008G081900 ATP-dependent Clp protease ATP-binding subunit clpA homolog,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
20 Sobic.010G049000 expressed protein -


Gene co-expression network
sample Sobic009G014100 Sobic009G014100 Sobic010G197000 Sobic010G197000 Sobic009G014100--Sobic010G197000 Sobic008G172300 Sobic008G172300 Sobic009G014100--Sobic008G172300 Sobic002G073200 Sobic002G073200 Sobic009G014100--Sobic002G073200 Sobic003G108900 Sobic003G108900 Sobic009G014100--Sobic003G108900 Sobic004G026500 Sobic004G026500 Sobic009G014100--Sobic004G026500 Sobic002G354600 Sobic002G354600 Sobic009G014100--Sobic002G354600 Sobic004G333400 Sobic004G333400 Sobic009G014100--Sobic004G333400 Sobic003G190000 Sobic003G190000 Sobic009G014100--Sobic003G190000 Sobic002G168300 Sobic002G168300 Sobic009G014100--Sobic002G168300 Sobic010G197000--Sobic009G014100 Sobic010G197000--Sobic002G354600 Sobic005G138600 Sobic005G138600 Sobic010G197000--Sobic005G138600 Sobic004G300000 Sobic004G300000 Sobic010G197000--Sobic004G300000 Sobic010G109600 Sobic010G109600 Sobic010G197000--Sobic010G109600 Sobic010G197000--Sobic003G190000 Sobic002G331800 Sobic002G331800 Sobic010G197000--Sobic002G331800 Sobic006G214700 Sobic006G214700 Sobic010G197000--Sobic006G214700 Sobic010G197000--Sobic008G172300 Sobic008G172300--Sobic004G026500 Sobic008G172300--Sobic009G014100 Sobic003G340600 Sobic003G340600 Sobic008G172300--Sobic003G340600 Sobic002G345700 Sobic002G345700 Sobic008G172300--Sobic002G345700 Sobic001G124100 Sobic001G124100 Sobic008G172300--Sobic001G124100 Sobic008G172300--Sobic010G197000 Sobic005G142800 Sobic005G142800 Sobic008G172300--Sobic005G142800 Sobic008G172300--Sobic002G168300 Sobic002G167500 Sobic002G167500 Sobic008G172300--Sobic002G167500 Sobic002G073200--Sobic009G014100 Sobic001G060500 Sobic001G060500 Sobic002G073200--Sobic001G060500 Sobic002G073200--Sobic003G190000 Sobic002G418600 Sobic002G418600 Sobic002G073200--Sobic002G418600 Sobic003G203300 Sobic003G203300 Sobic002G073200--Sobic003G203300 Sobic010G110400 Sobic010G110400 Sobic002G073200--Sobic010G110400 Sobic002G073200--Sobic003G108900 Sobic001G500600 Sobic001G500600 Sobic002G073200--Sobic001G500600 Sobic006G233700 Sobic006G233700 Sobic002G073200--Sobic006G233700 Sobic004G165900 Sobic004G165900 Sobic003G108900--Sobic004G165900 Sobic004G252500 Sobic004G252500 Sobic003G108900--Sobic004G252500 Sobic004G300100 Sobic004G300100 Sobic003G108900--Sobic004G300100 Sobic010G231500 Sobic010G231500 Sobic003G108900--Sobic010G231500 Sobic002G173100 Sobic002G173100 Sobic003G108900--Sobic002G173100 Sobic003G108900--Sobic004G300000 Sobic003G108900--Sobic009G014100 Sobic004G271600 Sobic004G271600 Sobic003G108900--Sobic004G271600 Sobic004G207400 Sobic004G207400 Sobic003G108900--Sobic004G207400 Sobic004G026500--Sobic008G172300 Sobic004G026500--Sobic001G124100 Sobic009G193500 Sobic009G193500 Sobic004G026500--Sobic009G193500 Sobic001G219700 Sobic001G219700 Sobic004G026500--Sobic001G219700 Sobic001G072700 Sobic001G072700 Sobic004G026500--Sobic001G072700 Sobic002G339300 Sobic002G339300 Sobic004G026500--Sobic002G339300 Sobic004G026500--Sobic003G203300 Sobic007G227700 Sobic007G227700 Sobic004G026500--Sobic007G227700 Sobic002G276100 Sobic002G276100 Sobic004G026500--Sobic002G276100 Sobic002G354600--Sobic010G197000 Sobic002G354600--Sobic004G300000 Sobic002G354600--Sobic005G138600 Sobic002G354600--Sobic009G014100 Sobic002G025700 Sobic002G025700 Sobic002G354600--Sobic002G025700 Sobic010G035500 Sobic010G035500 Sobic002G354600--Sobic010G035500 Sobic002G354600--Sobic003G108900 Sobic002G354600--Sobic002G331800 Sobic004G298900 Sobic004G298900 Sobic002G354600--Sobic004G298900 Sobic003G334100 Sobic003G334100 Sobic004G333400--Sobic003G334100 Sobic004G333400--Sobic001G500600 Sobic010G183400 Sobic010G183400 Sobic004G333400--Sobic010G183400 Sobic001G450600 Sobic001G450600 Sobic004G333400--Sobic001G450600 Sobic002G181000 Sobic002G181000 Sobic004G333400--Sobic002G181000 Sobic006G280800 Sobic006G280800 Sobic004G333400--Sobic006G280800 Sobic003G372900 Sobic003G372900 Sobic004G333400--Sobic003G372900 Sobic003G232700 Sobic003G232700 Sobic004G333400--Sobic003G232700 Sobic001G283700 Sobic001G283700 Sobic004G333400--Sobic001G283700 Sobic003G190000--Sobic001G060500 Sobic003G190000--Sobic002G073200 Sobic003G190000--Sobic002G173100 Sobic003G190000--Sobic010G197000 Sobic003G190000--Sobic003G203300 Sobic003G190000--Sobic009G014100 Sobic005G075100 Sobic005G075100 Sobic003G190000--Sobic005G075100 Sobic003G190000--Sobic005G142800 Sobic003G190000--Sobic001G219700 Sobic004G248400 Sobic004G248400 Sobic002G168300--Sobic004G248400 Sobic002G168300--Sobic008G172300 Sobic003G381200 Sobic003G381200 Sobic002G168300--Sobic003G381200 Sobic002G168300--Sobic004G026500 Sobic001G102500 Sobic001G102500 Sobic002G168300--Sobic001G102500 Sobic007G023200 Sobic007G023200 Sobic002G168300--Sobic007G023200 Sobic002G168300--Sobic009G014100 Sobic002G168300--Sobic004G333400 Sobic002G168300--Sobic001G219700
Octagon: transcription factors


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