Gene annotation
Transcriptome id Sobic.010G109600.1
Synonym Sb10g009570
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
angel, putative, expressed
UniProt C5Z844
Pfam PF03372
Panther DB PTHR12121 PTHR12121:SF29
NCBI CDD KOG2338; Transcriptional effector CCR4-related protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G18500 : DNAse I-like superfamily protein
RAP-DB (Rice) LOC_Os06g15410.1 : angel, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK18666 , PNT76091 , PNT76092
Barley HORVU7Hr1G042150.1 , HORVU7Hr1G042150.3 , HORVU7Hr1G042150.2 , HORVU7Hr1G042150.5 , HORVU7Hr1G042150.4 , HORVU7Hr1G042150.7 , HORVU7Hr1G042150.6 , HORVU0Hr1G020140.5 , HORVU0Hr1G020140.4 , HORVU0Hr1G020140.6 , HORVU0Hr1G020140.1 , HORVU0Hr1G020140.3 , HORVU0Hr1G020140.2
Wheat TraesCS7B02G114200 , TraesCS7B02G114200 , TraesCS7B02G114200 , TraesCS7B02G114200 , TraesCS7B02G114200 , TraesCS7D02G209700 , TraesCS7D02G209700 , TraesCS7D02G209700 , TraesCS7D02G209700 , TraesCS7A02G206900 , TraesCS7A02G206900 , TraesCS7A02G206900 , TraesCS7A02G206900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G197000 M16 domain containing zinc peptidase, putative, expressed -
2 Sobic.004G333400 COBW domain containing protein, putative, expressed -
3 Sobic.003G084500 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
4 Sobic.003G141100 O-sialoglycoprotein endopeptidase, putative, expressed K01409: KAE1, tsaD, N6-L-threonylcarbamoyladenine synthase
5 Sobic.001G450600 uncharacterized protein sll0194, putative, expressed K03118: sec-independent protein translocase protein TatC
6 Sobic.009G014100 OsFBX178 - F-box domain containing protein, expressed -
7 Sobic.001G102500 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative, expressed K03527: ispH, 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
8 Sobic.001G283700 acyltransferase, putative, expressed K00630: glycerol-3-phosphate O-acyltransferase
9 Sobic.008G172300 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
10 Sobic.006G186600 dihydrodipicolinate synthase, chloroplast precursor, putative, expressed K01714: 4-hydroxy-tetrahydrodipicolinate synthase
11 Sobic.006G273400 pentatricopeptide repeat protein, putative, expressed -
12 Sobic.006G210400 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
13 Sobic.003G067100 aspartyl-tRNA synthetase, putative, expressed K01876: aspartyl-tRNA synthetase
14 Sobic.001G465700 aminotransferase, putative, expressed K00833: adenosylmethionine---8-amino-7-oxononanoate aminotransferase
15 Sobic.002G181000 chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed -
16 Sobic.001G500600 pseudouridine synthase family protein, putative, expressed -
17 Sobic.008G063200 expressed protein -
18 Sobic.008G089500 Fe-S metabolism associated domain containing protein, expressed K03517: quinolinate synthase
19 Sobic.003G286300 GTPase of unknown function domain containing protein, putative, expressed K03978: GTP-binding protein
20 Sobic.001G495200 Glutathione reductases(PubMedID : 23783412)@glutathione reductase, putative, expressed K00383: GSR, glutathione reductase (NADPH)


Gene co-expression network
sample Sobic010G109600 Sobic010G109600 Sobic010G197000 Sobic010G197000 Sobic010G109600--Sobic010G197000 Sobic004G333400 Sobic004G333400 Sobic010G109600--Sobic004G333400 Sobic003G084500 Sobic003G084500 Sobic010G109600--Sobic003G084500 Sobic003G141100 Sobic003G141100 Sobic010G109600--Sobic003G141100 Sobic001G450600 Sobic001G450600 Sobic010G109600--Sobic001G450600 Sobic009G014100 Sobic009G014100 Sobic010G109600--Sobic009G014100 Sobic001G102500 Sobic001G102500 Sobic010G109600--Sobic001G102500 Sobic001G283700 Sobic001G283700 Sobic010G109600--Sobic001G283700 Sobic008G172300 Sobic008G172300 Sobic010G109600--Sobic008G172300 Sobic010G197000--Sobic009G014100 Sobic002G354600 Sobic002G354600 Sobic010G197000--Sobic002G354600 Sobic005G138600 Sobic005G138600 Sobic010G197000--Sobic005G138600 Sobic004G300000 Sobic004G300000 Sobic010G197000--Sobic004G300000 Sobic010G197000--Sobic010G109600 Sobic003G190000 Sobic003G190000 Sobic010G197000--Sobic003G190000 Sobic002G331800 Sobic002G331800 Sobic010G197000--Sobic002G331800 Sobic006G214700 Sobic006G214700 Sobic010G197000--Sobic006G214700 Sobic010G197000--Sobic008G172300 Sobic003G334100 Sobic003G334100 Sobic004G333400--Sobic003G334100 Sobic001G500600 Sobic001G500600 Sobic004G333400--Sobic001G500600 Sobic010G183400 Sobic010G183400 Sobic004G333400--Sobic010G183400 Sobic004G333400--Sobic001G450600 Sobic002G181000 Sobic002G181000 Sobic004G333400--Sobic002G181000 Sobic006G280800 Sobic006G280800 Sobic004G333400--Sobic006G280800 Sobic003G372900 Sobic003G372900 Sobic004G333400--Sobic003G372900 Sobic003G232700 Sobic003G232700 Sobic004G333400--Sobic003G232700 Sobic004G333400--Sobic001G283700 Sobic003G084500--Sobic004G333400 Sobic003G084500--Sobic003G334100 Sobic003G084500--Sobic001G450600 Sobic009G234200 Sobic009G234200 Sobic003G084500--Sobic009G234200 Sobic003G286300 Sobic003G286300 Sobic003G084500--Sobic003G286300 Sobic003G444500 Sobic003G444500 Sobic003G084500--Sobic003G444500 Sobic003G084500--Sobic010G183400 Sobic002G131700 Sobic002G131700 Sobic003G084500--Sobic002G131700 Sobic001G054100 Sobic001G054100 Sobic003G084500--Sobic001G054100 Sobic003G141100--Sobic001G500600 Sobic004G328400 Sobic004G328400 Sobic003G141100--Sobic004G328400 Sobic004G336200 Sobic004G336200 Sobic003G141100--Sobic004G336200 Sobic003G141100--Sobic003G232700 Sobic003G141100--Sobic003G372900 Sobic003G141100--Sobic001G054100 Sobic009G148500 Sobic009G148500 Sobic003G141100--Sobic009G148500 Sobic003G160800 Sobic003G160800 Sobic003G141100--Sobic003G160800 Sobic005G002900 Sobic005G002900 Sobic003G141100--Sobic005G002900 Sobic001G450600--Sobic006G214700 Sobic001G450600--Sobic004G333400 Sobic008G063200 Sobic008G063200 Sobic001G450600--Sobic008G063200 Sobic001G450600--Sobic010G183400 Sobic001G450600--Sobic003G084500 Sobic001G450600--Sobic002G331800 Sobic001G450600--Sobic003G286300 Sobic001G450600--Sobic003G334100 Sobic010G189200 Sobic010G189200 Sobic001G450600--Sobic010G189200 Sobic009G014100--Sobic010G197000 Sobic009G014100--Sobic008G172300 Sobic002G073200 Sobic002G073200 Sobic009G014100--Sobic002G073200 Sobic003G108900 Sobic003G108900 Sobic009G014100--Sobic003G108900 Sobic004G026500 Sobic004G026500 Sobic009G014100--Sobic004G026500 Sobic009G014100--Sobic002G354600 Sobic009G014100--Sobic004G333400 Sobic009G014100--Sobic003G190000 Sobic002G168300 Sobic002G168300 Sobic009G014100--Sobic002G168300 Sobic003G067100 Sobic003G067100 Sobic001G102500--Sobic003G067100 Sobic005G014700 Sobic005G014700 Sobic001G102500--Sobic005G014700 Sobic010G255100 Sobic010G255100 Sobic001G102500--Sobic010G255100 Sobic006G186600 Sobic006G186600 Sobic001G102500--Sobic006G186600 Sobic003G170200 Sobic003G170200 Sobic001G102500--Sobic003G170200 Sobic001G102500--Sobic002G168300 Sobic003G434700 Sobic003G434700 Sobic001G102500--Sobic003G434700 Sobic006G210400 Sobic006G210400 Sobic001G102500--Sobic006G210400 Sobic004G238900 Sobic004G238900 Sobic001G102500--Sobic004G238900 Sobic006G106400 Sobic006G106400 Sobic001G283700--Sobic006G106400 Sobic009G175500 Sobic009G175500 Sobic001G283700--Sobic009G175500 Sobic001G126300 Sobic001G126300 Sobic001G283700--Sobic001G126300 Sobic001G283700--Sobic004G333400 Sobic004G012900 Sobic004G012900 Sobic001G283700--Sobic004G012900 Sobic001G128600 Sobic001G128600 Sobic001G283700--Sobic001G128600 Sobic004G165000 Sobic004G165000 Sobic001G283700--Sobic004G165000 Sobic002G112400 Sobic002G112400 Sobic001G283700--Sobic002G112400 Sobic005G110400 Sobic005G110400 Sobic001G283700--Sobic005G110400 Sobic008G172300--Sobic004G026500 Sobic008G172300--Sobic009G014100 Sobic003G340600 Sobic003G340600 Sobic008G172300--Sobic003G340600 Sobic002G345700 Sobic002G345700 Sobic008G172300--Sobic002G345700 Sobic001G124100 Sobic001G124100 Sobic008G172300--Sobic001G124100 Sobic008G172300--Sobic010G197000 Sobic005G142800 Sobic005G142800 Sobic008G172300--Sobic005G142800 Sobic008G172300--Sobic002G168300 Sobic002G167500 Sobic002G167500 Sobic008G172300--Sobic002G167500
Octagon: transcription factors


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